RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Sprr2kO70562 68 aa3.53□□□□□ -1.84
Pcdh20-202ENSMUST00000192557 Lce1cQ9D1C5 147 aa3.53□□□□□ -1.84
Pcdh20-202ENSMUST00000192557 Sprr2gO70558 76 aa3.52□□□□□ -1.85
Pcdh20-202ENSMUST00000192557 2300003K06RikA2A4M0 262 aa3.5□□□□□ -1.85
Pcdh20-202ENSMUST00000192557 4933428G20RikQ9D3X4 101 aa3.5□□□□□ -1.85
Pcdh20-202ENSMUST00000192557 Gm11938Q9D3H4 131 aa3.48□□□□□ -1.85
Pcdh20-202ENSMUST00000192557 Lce1bQ9D149 137 aa3.48□□□□□ -1.85
Pcdh20-202ENSMUST00000192557 Sprr2dO70555 85 aa3.45□□□□□ -1.86
Pcdh20-202ENSMUST00000192557 Muc16A0A140LJ72 8478 aa3.4□□□□□ -1.86
Pcdh20-202ENSMUST00000192557 Krtap4-7Q9D732 168 aa3.4□□□□□ -1.87
Pcdh20-202ENSMUST00000192557 Lce1fB9EJP6 147 aa3.37□□□□□ -1.87
Pcdh20-202ENSMUST00000192557 Lce1a1Q9CQH5 143 aa3.37□□□□□ -1.87
Pcdh20-202ENSMUST00000192557 Lce3cQ91V05 98 aa3.37□□□□□ -1.87
Pcdh20-202ENSMUST00000192557 Gm10100J3QK64 120 aa3.36□□□□□ -1.87
Pcdh20-202ENSMUST00000192557 Lce1lQ9D1G7 135 aa3.34□□□□□ -1.87
Pcdh20-202ENSMUST00000192557 Lce1kJ3QP15 125 aa3.33□□□□□ -1.88
Pcdh20-202ENSMUST00000192557 Macf1Q9QXZ0 7354 aaKnown RBP3.32□□□□□ -1.88
Pcdh20-202ENSMUST00000192557 Lce3eF8VQJ0 98 aa3.31□□□□□ -1.88
Pcdh20-202ENSMUST00000192557 Lce3fQ6PAI4 98 aa3.31□□□□□ -1.88
Pcdh20-202ENSMUST00000192557 Krtap19-4Q925H7 84 aa3.31□□□□□ -1.88
Pcdh20-202ENSMUST00000192557 ObscnA2AAJ9 8891 aaKnown RBP3.31□□□□□ -1.88
Pcdh20-202ENSMUST00000192557 Sprr2iO70560 76 aa3.27□□□□□ -1.89
Pcdh20-202ENSMUST00000192557 Lce3dE9Q8V1 98 aa3.25□□□□□ -1.89
Pcdh20-202ENSMUST00000192557 Gm10142J3KMP7 120 aa3.25□□□□□ -1.89
Pcdh20-202ENSMUST00000192557 Krtap6-3A0A087WQL6 57 aa3.23□□□□□ -1.89
Pcdh20-202ENSMUST00000192557 Krtap20-2E9Q0A8 60 aa3.21□□□□□ -1.89
Pcdh20-202ENSMUST00000192557 Lce3aQ497I5 98 aa3.16□□□□□ -1.9
Pcdh20-202ENSMUST00000192557 Mt1P02802 61 aaKnown RBP3.15□□□□□ -1.91
Pcdh20-202ENSMUST00000192557 Gm11568A2A4M2 211 aa3.12□□□□□ -1.91
Pcdh20-202ENSMUST00000192557 Krtap9-1Q64526 186 aa3.12□□□□□ -1.91
Pcdh20-202ENSMUST00000192557 A0A1Y7VJH8 109 aa3.1□□□□□ -1.91
Pcdh20-202ENSMUST00000192557 Sprr2hO70559 108 aa3.07□□□□□ -1.92
Pcdh20-202ENSMUST00000192557 A0A1Y7VJ07 166 aa3.03□□□□□ -1.93
Pcdh20-202ENSMUST00000192557 Krtap5-2Q9D5Z7 189 aa3□□□□□ -1.93
Pcdh20-202ENSMUST00000192557 Kmt2dQ6PDK2 5588 aa2.97□□□□□ -1.93
Pcdh20-202ENSMUST00000192557 Hmcn1D3YXG0 5634 aa2.96□□□□□ -1.94
Pcdh20-202ENSMUST00000192557 Gm11554B1AQB2 190 aa2.93□□□□□ -1.94
Pcdh20-202ENSMUST00000192557 Sprr2eO70556 76 aa2.93□□□□□ -1.94
Pcdh20-202ENSMUST00000192557 Sprr2fO70557 76 aa2.9□□□□□ -1.95
Pcdh20-202ENSMUST00000192557 Krtap4-16Q91W93 202 aa2.89□□□□□ -1.95
Pcdh20-202ENSMUST00000192557 Eppk1Q8R0W0 6548 aa2.87□□□□□ -1.95
Pcdh20-202ENSMUST00000192557 Gm10153A0A1B0GRL1 320 aa2.85□□□□□ -1.95
Pcdh20-202ENSMUST00000192557 Gm11559Q9D3H7 191 aa2.83□□□□□ -1.96
Pcdh20-202ENSMUST00000192557 Mt3P28184 68 aa2.81□□□□□ -1.96
Pcdh20-202ENSMUST00000192557 Muc19Q6PZE0 7524 aa2.81□□□□□ -1.96
Pcdh20-202ENSMUST00000192557 DstQ91ZU6 7393 aaKnown RBP2.81□□□□□ -1.96
Pcdh20-202ENSMUST00000192557 Gm11639A0A1D5RLM8 5808 aa2.8□□□□□ -1.96
Pcdh20-202ENSMUST00000192557 Gm4553A0A1B0GSA9 284 aa2.77□□□□□ -1.97
Pcdh20-202ENSMUST00000192557 NebE9Q1W3 7152 aa2.76□□□□□ -1.97
Pcdh20-202ENSMUST00000192557 Gm10024A0A0A0MQA4 119 aa2.74□□□□□ -1.97
Pcdh20-202ENSMUST00000192557 Gm2431E9Q8S1 172 aa2.73□□□□□ -1.97
Pcdh20-202ENSMUST00000192557 A030005L19RikA0A1Y7VIU2 113 aa2.71□□□□□ -1.98
Pcdh20-202ENSMUST00000192557 Gm45337A0A1B0GS71 263 aa2.7□□□□□ -1.98
Pcdh20-202ENSMUST00000192557 Gpr98Q8VHN7 6298 aaKnown RBP2.64□□□□□ -1.99
Pcdh20-202ENSMUST00000192557 A0A286YCP9 139 aa2.61□□□□□ -1.99
Pcdh20-202ENSMUST00000192557 Gm40460A0A1B0GR10 244 aa2.6□□□□□ -1.99
Pcdh20-202ENSMUST00000192557 Gm7579A0A1B0GRJ4 243 aa2.6□□□□□ -1.99
Pcdh20-202ENSMUST00000192557 Krtap5-5Q2TA51 241 aa2.6□□□□□ -1.99
Pcdh20-202ENSMUST00000192557 Krtap5-4Q62220 223 aa2.6□□□□□ -1.99
Pcdh20-202ENSMUST00000192557 Krtap28-10A0A1Y7VP58 119 aa2.54□□□□□ -2
Pcdh20-202ENSMUST00000192557 Krtap28-13A0A087WQP5 138 aa2.46□□□□□ -2.02
Pcdh20-202ENSMUST00000192557 A030005K14RikA0A1Y7VNY1 122 aa2.44□□□□□ -2.02
Pcdh20-202ENSMUST00000192557 Gm39115A0A1B0GSH7 232 aa2.43□□□□□ -2.02
Pcdh20-202ENSMUST00000192557 Gm7544A0A1Y7VJ58 118 aa2.4□□□□□ -2.03
Pcdh20-202ENSMUST00000192557 AhnakE9Q616 5656 aaKnown RBP2.4□□□□□ -2.03
Pcdh20-202ENSMUST00000192557 1110025L11RikO09048 78 aa2.37□□□□□ -2.03
Pcdh20-202ENSMUST00000192557 Krtap6-5Q925H3 78 aa2.37□□□□□ -2.03
Pcdh20-202ENSMUST00000192557 Gm45618A0A1B0GSA0 219 aa2.26□□□□□ -2.05
Pcdh20-202ENSMUST00000192557 A030003K21RikA0A1Y7VIM3 128 aa2.2□□□□□ -2.06
Pcdh20-202ENSMUST00000192557 Gm6217A0A1Y7VJK9 128 aa2.2□□□□□ -2.06
Pcdh20-202ENSMUST00000192557 A030014E15RikA0A1Y7VJV2 120 aa2.13□□□□□ -2.07
Pcdh20-202ENSMUST00000192557 Gm10229O08631 77 aa2.11□□□□□ -2.07
Pcdh20-202ENSMUST00000192557 Gm11567Q9D141 195 aa2.09□□□□□ -2.08
Pcdh20-202ENSMUST00000192557 Sprr2bO70554 98 aa1.98□□□□□ -2.09
Pcdh20-202ENSMUST00000192557 Gm29735A0A1B0GT06 219 aa1.94□□□□□ -2.1
Pcdh20-202ENSMUST00000192557 Krtap21-1Q925H4 128 aa1.93□□□□□ -2.1
Pcdh20-202ENSMUST00000192557 Phgr1Q8K0G7 91 aa1.82□□□□□ -2.12
Pcdh20-202ENSMUST00000192557 Krtap6-2O08884 159 aa1.81□□□□□ -2.12
Pcdh20-202ENSMUST00000192557 Krtap5-1Q64507 230 aa1.46□□□□□ -2.18
Pcdh20-202ENSMUST00000192557 Gm4559A4IF42 199 aa1.13□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 59.8 ms