RNA–Protein interactions for RNA: ENSMUST00000185633.6

Xrn1-202, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 10,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-202ENSMUST00000185633 Krtap19-9aF8WH65 55 aa1.62□□□□□ -2.15
Xrn1-202ENSMUST00000185633 Krtap12-1Q9Z287 130 aa1.62□□□□□ -2.15
Xrn1-202ENSMUST00000185633 Krtap8-1O08633 61 aa1.62□□□□□ -2.15
Xrn1-202ENSMUST00000185633 Sprr2gO70558 76 aa1.6□□□□□ -2.15
Xrn1-202ENSMUST00000185633 Fsip2A2ARZ3 6995 aa1.6□□□□□ -2.15
Xrn1-202ENSMUST00000185633 Lce1lQ9D1G7 135 aa1.59□□□□□ -2.15
Xrn1-202ENSMUST00000185633 2300003K06RikA2A4M0 262 aa1.58□□□□□ -2.16
Xrn1-202ENSMUST00000185633 Gm10272F7CZ33 110 aa1.57□□□□□ -2.16
Xrn1-202ENSMUST00000185633 Gm10100J3QK64 120 aa1.56□□□□□ -2.16
Xrn1-202ENSMUST00000185633 Lce3bQ9CQM7 98 aa1.54□□□□□ -2.16
Xrn1-202ENSMUST00000185633 Gm10142J3KMP7 120 aa1.54□□□□□ -2.16
Xrn1-202ENSMUST00000185633 Krtap4-7Q9D732 168 aa1.53□□□□□ -2.16
Xrn1-202ENSMUST00000185633 Kmt2dQ6PDK2 5588 aa1.53□□□□□ -2.17
Xrn1-202ENSMUST00000185633 A0A286YCP9 139 aa1.5□□□□□ -2.17
Xrn1-202ENSMUST00000185633 Lce3cQ91V05 98 aa1.5□□□□□ -2.17
Xrn1-202ENSMUST00000185633 Krtap9-3Q3V2C1 136 aa1.48□□□□□ -2.17
Xrn1-202ENSMUST00000185633 Lce3dE9Q8V1 98 aa1.48□□□□□ -2.17
Xrn1-202ENSMUST00000185633 Lce3eF8VQJ0 98 aa1.47□□□□□ -2.17
Xrn1-202ENSMUST00000185633 Lce3fQ6PAI4 98 aa1.47□□□□□ -2.17
Xrn1-202ENSMUST00000185633 Sprr2dO70555 85 aa1.47□□□□□ -2.17
Xrn1-202ENSMUST00000185633 Lce1a1Q9CQH5 143 aa1.46□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Krtap6-3A0A087WQL6 57 aa1.46□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Lce3aQ497I5 98 aa1.46□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Gm10024A0A0A0MQA4 119 aa1.45□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Gm11554B1AQB2 190 aa1.45□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Krtap20-2E9Q0A8 60 aa1.44□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Mt2P02798 61 aa1.44□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Lce1bQ9D149 137 aa1.42□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Sprr2fO70557 76 aa1.42□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Lce1hQ9D6R3 140 aa1.4□□□□□ -2.18
Xrn1-202ENSMUST00000185633 Lce1dQ9D731 133 aa1.38□□□□□ -2.19
Xrn1-202ENSMUST00000185633 Syne1Q6ZWR6 8799 aa1.38□□□□□ -2.19
Xrn1-202ENSMUST00000185633 Gm11938Q9D3H4 131 aa1.38□□□□□ -2.19
Xrn1-202ENSMUST00000185633 Eppk1Q8R0W0 6548 aa1.37□□□□□ -2.19
Xrn1-202ENSMUST00000185633 Sprr2iO70560 76 aa1.36□□□□□ -2.19
Xrn1-202ENSMUST00000185633 Macf1Q9QXZ0 7354 aaKnown RBP1.35□□□□□ -2.19
Xrn1-202ENSMUST00000185633 Krtap22-2J3QNX6 67 aa1.34□□□□□ -2.19
Xrn1-202ENSMUST00000185633 Lce1kJ3QP15 125 aa1.33□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Sprr2eO70556 76 aa1.33□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Krtap19-4Q925H7 84 aa1.33□□□□□ -2.2
Xrn1-202ENSMUST00000185633 AhnakE9Q616 5656 aaKnown RBP1.31□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Gm11639A0A1D5RLM8 5808 aa1.31□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Gm11568A2A4M2 211 aa1.3□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Krtap9-1Q64526 186 aa1.3□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Lce1cQ9D1C5 147 aa1.3□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Sprr2hO70559 108 aa1.29□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Hmcn1D3YXG0 5634 aa1.28□□□□□ -2.2
Xrn1-202ENSMUST00000185633 Lce1eQ9D139 143 aa1.26□□□□□ -2.21
Xrn1-202ENSMUST00000185633 Gm2431E9Q8S1 172 aa1.26□□□□□ -2.21
Xrn1-202ENSMUST00000185633 Gm11559Q9D3H7 191 aa1.26□□□□□ -2.21
Xrn1-202ENSMUST00000185633 ObscnA2AAJ9 8891 aaKnown RBP1.26□□□□□ -2.21
Xrn1-202ENSMUST00000185633 Lce1fB9EJP6 147 aa1.26□□□□□ -2.21
Xrn1-202ENSMUST00000185633 Krtap5-2Q9D5Z7 189 aa1.24□□□□□ -2.21
Xrn1-202ENSMUST00000185633 Gpr98Q8VHN7 6298 aaKnown RBP1.22□□□□□ -2.21
Xrn1-202ENSMUST00000185633 Gm10153A0A1B0GRL1 320 aa1.21□□□□□ -2.21
Xrn1-202ENSMUST00000185633 Gm40460A0A1B0GR10 244 aa1.21□□□□□ -2.22
Xrn1-202ENSMUST00000185633 Gm7579A0A1B0GRJ4 243 aa1.21□□□□□ -2.22
Xrn1-202ENSMUST00000185633 Krtap5-5Q2TA51 241 aa1.21□□□□□ -2.22
Xrn1-202ENSMUST00000185633 Krtap5-4Q62220 223 aa1.21□□□□□ -2.22
Xrn1-202ENSMUST00000185633 Gm45337A0A1B0GS71 263 aa1.19□□□□□ -2.22
Xrn1-202ENSMUST00000185633 Mt1P02802 61 aaKnown RBP1.16□□□□□ -2.22
Xrn1-202ENSMUST00000185633 Muc19Q6PZE0 7524 aa1.14□□□□□ -2.23
Xrn1-202ENSMUST00000185633 NebE9Q1W3 7152 aa1.14□□□□□ -2.23
Xrn1-202ENSMUST00000185633 Sprr2bO70554 98 aa1.13□□□□□ -2.23
Xrn1-202ENSMUST00000185633 Muc16A0A140LJ72 8478 aa1.13□□□□□ -2.23
Xrn1-202ENSMUST00000185633 Gm39115A0A1B0GSH7 232 aa1.13□□□□□ -2.23
Xrn1-202ENSMUST00000185633 Gm4553A0A1B0GSA9 284 aa1.12□□□□□ -2.23
Xrn1-202ENSMUST00000185633 Krtap4-16Q91W93 202 aa1.09□□□□□ -2.24
Xrn1-202ENSMUST00000185633 DstQ91ZU6 7393 aaKnown RBP1.08□□□□□ -2.24
Xrn1-202ENSMUST00000185633 Gm45618A0A1B0GSA0 219 aa1.02□□□□□ -2.25
Xrn1-202ENSMUST00000185633 Gm29735A0A1B0GT06 219 aa0.98□□□□□ -2.25
Xrn1-202ENSMUST00000185633 Gm11567Q9D141 195 aa0.91□□□□□ -2.26
Xrn1-202ENSMUST00000185633 1110025L11RikO09048 78 aa0.83□□□□□ -2.28
Xrn1-202ENSMUST00000185633 Krtap6-5Q925H3 78 aa0.83□□□□□ -2.28
Xrn1-202ENSMUST00000185633 Phgr1Q8K0G7 91 aa0.79□□□□□ -2.28
Xrn1-202ENSMUST00000185633 Gm10229O08631 77 aa0.78□□□□□ -2.29
Xrn1-202ENSMUST00000185633 Krtap21-1Q925H4 128 aa0.71□□□□□ -2.3
Xrn1-202ENSMUST00000185633 Krtap5-1Q64507 230 aa0.7□□□□□ -2.3
Xrn1-202ENSMUST00000185633 Krtap6-2O08884 159 aa0.65□□□□□ -2.31
Xrn1-202ENSMUST00000185633 Gm4559A4IF42 199 aa0.63□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 78.1 ms