RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Lce1cQ9D1C5 147 aa4.48□□□□□ -1.69
Rnf4-204ENSMUST00000182047 Gm11562A0PK51 136 aa4.43□□□□□ -1.7
Rnf4-204ENSMUST00000182047 Lce1bQ9D149 137 aa4.43□□□□□ -1.7
Rnf4-204ENSMUST00000182047 Sprr2dO70555 85 aa4.42□□□□□ -1.7
Rnf4-204ENSMUST00000182047 Krtap4-13Q9D7P3 165 aa4.41□□□□□ -1.7
Rnf4-204ENSMUST00000182047 A0A1Y7VLE6 161 aa4.36□□□□□ -1.71
Rnf4-204ENSMUST00000182047 A030005L19RikA0A1Y7VIU2 113 aa4.35□□□□□ -1.71
Rnf4-204ENSMUST00000182047 2300003K06RikA2A4M0 262 aa4.35□□□□□ -1.71
Rnf4-204ENSMUST00000182047 Lce3bQ9CQM7 98 aa4.33□□□□□ -1.72
Rnf4-204ENSMUST00000182047 Gm10100J3QK64 120 aa4.32□□□□□ -1.72
Rnf4-204ENSMUST00000182047 Lce1fB9EJP6 147 aa4.31□□□□□ -1.72
Rnf4-204ENSMUST00000182047 Lce1a1Q9CQH5 143 aa4.31□□□□□ -1.72
Rnf4-204ENSMUST00000182047 Gm7544A0A1Y7VJ58 118 aa4.3□□□□□ -1.72
Rnf4-204ENSMUST00000182047 Sprr2kO70562 68 aa4.3□□□□□ -1.72
Rnf4-204ENSMUST00000182047 Krtap28-13A0A087WQP5 138 aa4.28□□□□□ -1.72
Rnf4-204ENSMUST00000182047 A030005K14RikA0A1Y7VNY1 122 aa4.21□□□□□ -1.74
Rnf4-204ENSMUST00000182047 Gm10142J3KMP7 120 aa4.21□□□□□ -1.74
Rnf4-204ENSMUST00000182047 Krtap19-4Q925H7 84 aa4.14□□□□□ -1.75
Rnf4-204ENSMUST00000182047 Lce3cQ91V05 98 aa4.13□□□□□ -1.75
Rnf4-204ENSMUST00000182047 Lce1kJ3QP15 125 aa4.11□□□□□ -1.75
Rnf4-204ENSMUST00000182047 Lce1lQ9D1G7 135 aa4.11□□□□□ -1.75
Rnf4-204ENSMUST00000182047 Lce3dE9Q8V1 98 aa4.09□□□□□ -1.75
Rnf4-204ENSMUST00000182047 ObscnA2AAJ9 8891 aaKnown RBP4.06□□□□□ -1.76
Rnf4-204ENSMUST00000182047 Sprr2iO70560 76 aa4.05□□□□□ -1.76
Rnf4-204ENSMUST00000182047 Lce3eF8VQJ0 98 aa4.03□□□□□ -1.76
Rnf4-204ENSMUST00000182047 Lce3fQ6PAI4 98 aa4.03□□□□□ -1.76
Rnf4-204ENSMUST00000182047 Krtap6-3A0A087WQL6 57 aa4.01□□□□□ -1.77
Rnf4-204ENSMUST00000182047 Krtap20-2E9Q0A8 60 aa4□□□□□ -1.77
Rnf4-204ENSMUST00000182047 Sprr2hO70559 108 aa3.96□□□□□ -1.78
Rnf4-204ENSMUST00000182047 Mt1P02802 61 aaKnown RBP3.96□□□□□ -1.78
Rnf4-204ENSMUST00000182047 Gm11568A2A4M2 211 aa3.95□□□□□ -1.78
Rnf4-204ENSMUST00000182047 Krtap9-1Q64526 186 aa3.95□□□□□ -1.78
Rnf4-204ENSMUST00000182047 Krtap31-1Q9D644 177 aa3.92□□□□□ -1.78
Rnf4-204ENSMUST00000182047 Lce3aQ497I5 98 aa3.91□□□□□ -1.78
Rnf4-204ENSMUST00000182047 Macf1Q9QXZ0 7354 aaKnown RBP3.9□□□□□ -1.79
Rnf4-204ENSMUST00000182047 Krtap31-2Q8CAY5 177 aa3.89□□□□□ -1.79
Rnf4-204ENSMUST00000182047 Krtap5-2Q9D5Z7 189 aa3.88□□□□□ -1.79
Rnf4-204ENSMUST00000182047 A0A286YCP9 139 aa3.81□□□□□ -1.8
Rnf4-204ENSMUST00000182047 Sprr2eO70556 76 aa3.81□□□□□ -1.8
Rnf4-204ENSMUST00000182047 Krtap4-16Q91W93 202 aa3.81□□□□□ -1.8
Rnf4-204ENSMUST00000182047 Muc16A0A140LJ72 8478 aa3.78□□□□□ -1.8
Rnf4-204ENSMUST00000182047 Sprr2fO70557 76 aa3.78□□□□□ -1.8
Rnf4-204ENSMUST00000182047 A030003K21RikA0A1Y7VIM3 128 aa3.77□□□□□ -1.81
Rnf4-204ENSMUST00000182047 Gm6217A0A1Y7VJK9 128 aa3.77□□□□□ -1.81
Rnf4-204ENSMUST00000182047 Gm10153A0A1B0GRL1 320 aa3.67□□□□□ -1.82
Rnf4-204ENSMUST00000182047 A0A1Y7VJ07 166 aa3.63□□□□□ -1.83
Rnf4-204ENSMUST00000182047 Hmcn1D3YXG0 5634 aa3.63□□□□□ -1.83
Rnf4-204ENSMUST00000182047 Gm11559Q9D3H7 191 aa3.61□□□□□ -1.83
Rnf4-204ENSMUST00000182047 Kmt2dQ6PDK2 5588 aa3.6□□□□□ -1.83
Rnf4-204ENSMUST00000182047 Gm11554B1AQB2 190 aa3.59□□□□□ -1.83
Rnf4-204ENSMUST00000182047 Gm4553A0A1B0GSA9 284 aa3.58□□□□□ -1.84
Rnf4-204ENSMUST00000182047 Gm45337A0A1B0GS71 263 aa3.52□□□□□ -1.85
Rnf4-204ENSMUST00000182047 Mt3P28184 68 aa3.52□□□□□ -1.85
Rnf4-204ENSMUST00000182047 Gm2431E9Q8S1 172 aa3.5□□□□□ -1.85
Rnf4-204ENSMUST00000182047 A030014E15RikA0A1Y7VJV2 120 aa3.46□□□□□ -1.86
Rnf4-204ENSMUST00000182047 Gm10024A0A0A0MQA4 119 aa3.42□□□□□ -1.86
Rnf4-204ENSMUST00000182047 Gm40460A0A1B0GR10 244 aa3.4□□□□□ -1.87
Rnf4-204ENSMUST00000182047 Gm7579A0A1B0GRJ4 243 aa3.4□□□□□ -1.87
Rnf4-204ENSMUST00000182047 Krtap5-5Q2TA51 241 aa3.4□□□□□ -1.87
Rnf4-204ENSMUST00000182047 Krtap5-4Q62220 223 aa3.4□□□□□ -1.87
Rnf4-204ENSMUST00000182047 Muc19Q6PZE0 7524 aa3.3□□□□□ -1.88
Rnf4-204ENSMUST00000182047 DstQ91ZU6 7393 aaKnown RBP3.29□□□□□ -1.88
Rnf4-204ENSMUST00000182047 Eppk1Q8R0W0 6548 aa3.23□□□□□ -1.89
Rnf4-204ENSMUST00000182047 Gm11639A0A1D5RLM8 5808 aa3.19□□□□□ -1.9
Rnf4-204ENSMUST00000182047 Gm39115A0A1B0GSH7 232 aa3.18□□□□□ -1.9
Rnf4-204ENSMUST00000182047 NebE9Q1W3 7152 aa3.02□□□□□ -1.93
Rnf4-204ENSMUST00000182047 AhnakE9Q616 5656 aaKnown RBP2.98□□□□□ -1.93
Rnf4-204ENSMUST00000182047 1110025L11RikO09048 78 aa2.97□□□□□ -1.93
Rnf4-204ENSMUST00000182047 Krtap6-5Q925H3 78 aa2.97□□□□□ -1.93
Rnf4-204ENSMUST00000182047 Gpr98Q8VHN7 6298 aaKnown RBP2.8□□□□□ -1.96
Rnf4-204ENSMUST00000182047 Gm45618A0A1B0GSA0 219 aa2.76□□□□□ -1.97
Rnf4-204ENSMUST00000182047 Gm10229O08631 77 aa2.64□□□□□ -1.99
Rnf4-204ENSMUST00000182047 Gm11567Q9D141 195 aa2.62□□□□□ -1.99
Rnf4-204ENSMUST00000182047 Gm29735A0A1B0GT06 219 aa2.55□□□□□ -2
Rnf4-204ENSMUST00000182047 Sprr2bO70554 98 aa2.5□□□□□ -2.01
Rnf4-204ENSMUST00000182047 Krtap21-1Q925H4 128 aa2.43□□□□□ -2.02
Rnf4-204ENSMUST00000182047 Phgr1Q8K0G7 91 aa2.37□□□□□ -2.03
Rnf4-204ENSMUST00000182047 Krtap6-2O08884 159 aa2.26□□□□□ -2.05
Rnf4-204ENSMUST00000182047 Krtap5-1Q64507 230 aa1.75□□□□□ -2.13
Rnf4-204ENSMUST00000182047 Gm4559A4IF42 199 aa1.66□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 99.2 ms