RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Lce1cQ9D1C5 147 aa6.48□□□□□ -1.37
Sox1-201ENSMUST00000180353 Lce1lQ9D1G7 135 aa6.48□□□□□ -1.37
Sox1-201ENSMUST00000180353 Lce1bQ9D149 137 aa6.44□□□□□ -1.38
Sox1-201ENSMUST00000180353 Lce1eQ9D139 143 aa6.42□□□□□ -1.38
Sox1-201ENSMUST00000180353 Sprr2eO70556 76 aa6.39□□□□□ -1.39
Sox1-201ENSMUST00000180353 Mt4P47945 62 aa6.37□□□□□ -1.39
Sox1-201ENSMUST00000180353 Gm11562A0PK51 136 aa6.35□□□□□ -1.39
Sox1-201ENSMUST00000180353 Krtap4-16Q91W93 202 aa6.28□□□□□ -1.4
Sox1-201ENSMUST00000180353 Krtap4-1Q3UUY3 169 aa6.23□□□□□ -1.41
Sox1-201ENSMUST00000180353 Muc5bE9Q5I3 4800 aa6.2□□□□□ -1.42
Sox1-201ENSMUST00000180353 Gm11596B1AQB0 205 aa6.19□□□□□ -1.42
Sox1-201ENSMUST00000180353 Fsip2A2ARZ3 6995 aa6.18□□□□□ -1.42
Sox1-201ENSMUST00000180353 Gm11564A2A4L9 201 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Gm11563B1AQ90 168 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Gm11595B1AQA7 289 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Krtap4-8B1AQA8 209 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Krtap4-9B1AQA9 244 aa6.05□□□□□ -1.44
Sox1-201ENSMUST00000180353 Muc16A0A140LJ72 8478 aa6.03□□□□□ -1.44
Sox1-201ENSMUST00000180353 Lce1a1Q9CQH5 143 aa5.99□□□□□ -1.45
Sox1-201ENSMUST00000180353 Syne2Q6ZWQ0 6874 aaKnown RBP5.97□□□□□ -1.45
Sox1-201ENSMUST00000180353 Krtap31-2Q8CAY5 177 aa5.96□□□□□ -1.45
Sox1-201ENSMUST00000180353 SspoQ8CG65 4998 aa5.95□□□□□ -1.46
Sox1-201ENSMUST00000180353 2300003K06RikA2A4M0 262 aa5.9□□□□□ -1.46
Sox1-201ENSMUST00000180353 Krtap4-13Q9D7P3 165 aa5.89□□□□□ -1.47
Sox1-201ENSMUST00000180353 Krtap4-7Q9D732 168 aa5.83□□□□□ -1.48
Sox1-201ENSMUST00000180353 Lce1kJ3QP15 125 aa5.73□□□□□ -1.49
Sox1-201ENSMUST00000180353 ObscnA2AAJ9 8891 aaKnown RBP5.55□□□□□ -1.52
Sox1-201ENSMUST00000180353 Gm11555B1AQ89 175 aa5.5□□□□□ -1.53
Sox1-201ENSMUST00000180353 Macf1Q9QXZ0 7354 aaKnown RBP5.45□□□□□ -1.54
Sox1-201ENSMUST00000180353 Mt1P02802 61 aaKnown RBP5.42□□□□□ -1.54
Sox1-201ENSMUST00000180353 Krtap6-3A0A087WQL6 57 aa5.4□□□□□ -1.55
Sox1-201ENSMUST00000180353 Mt3P28184 68 aa5.39□□□□□ -1.55
Sox1-201ENSMUST00000180353 Gm11554B1AQB2 190 aa5.17□□□□□ -1.58
Sox1-201ENSMUST00000180353 Krtap20-2E9Q0A8 60 aa5.14□□□□□ -1.59
Sox1-201ENSMUST00000180353 Sprr2bO70554 98 aa4.96□□□□□ -1.62
Sox1-201ENSMUST00000180353 DstQ91ZU6 7393 aaKnown RBP4.93□□□□□ -1.62
Sox1-201ENSMUST00000180353 Eppk1Q8R0W0 6548 aa4.9□□□□□ -1.62
Sox1-201ENSMUST00000180353 NebE9Q1W3 7152 aa4.86□□□□□ -1.63
Sox1-201ENSMUST00000180353 Muc19Q6PZE0 7524 aa4.69□□□□□ -1.66
Sox1-201ENSMUST00000180353 Kmt2dQ6PDK2 5588 aa4.63□□□□□ -1.67
Sox1-201ENSMUST00000180353 Gm11568A2A4M2 211 aa4.38□□□□□ -1.71
Sox1-201ENSMUST00000180353 Krtap9-1Q64526 186 aa4.38□□□□□ -1.71
Sox1-201ENSMUST00000180353 1110025L11RikO09048 78 aa4.37□□□□□ -1.71
Sox1-201ENSMUST00000180353 Krtap6-5Q925H3 78 aa4.37□□□□□ -1.71
Sox1-201ENSMUST00000180353 Gm11559Q9D3H7 191 aa4.26□□□□□ -1.73
Sox1-201ENSMUST00000180353 Gpr98Q8VHN7 6298 aaKnown RBP4.25□□□□□ -1.73
Sox1-201ENSMUST00000180353 Gm11639A0A1D5RLM8 5808 aa4.22□□□□□ -1.73
Sox1-201ENSMUST00000180353 Krtap5-2Q9D5Z7 189 aa4.17□□□□□ -1.74
Sox1-201ENSMUST00000180353 Phgr1Q8K0G7 91 aa4.15□□□□□ -1.75
Sox1-201ENSMUST00000180353 Gm10229O08631 77 aa4.03□□□□□ -1.76
Sox1-201ENSMUST00000180353 Hmcn1D3YXG0 5634 aa3.99□□□□□ -1.77
Sox1-201ENSMUST00000180353 Gm4553A0A1B0GSA9 284 aa3.96□□□□□ -1.78
Sox1-201ENSMUST00000180353 A0A1Y7VJH8 109 aa3.93□□□□□ -1.78
Sox1-201ENSMUST00000180353 A030005L19RikA0A1Y7VIU2 113 aa3.84□□□□□ -1.79
Sox1-201ENSMUST00000180353 Gm2431E9Q8S1 172 aa3.81□□□□□ -1.8
Sox1-201ENSMUST00000180353 Gm10153A0A1B0GRL1 320 aa3.69□□□□□ -1.82
Sox1-201ENSMUST00000180353 Gm45337A0A1B0GS71 263 aa3.67□□□□□ -1.82
Sox1-201ENSMUST00000180353 Gm40460A0A1B0GR10 244 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 Gm7579A0A1B0GRJ4 243 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 Krtap5-5Q2TA51 241 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 Krtap5-4Q62220 223 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 AhnakE9Q616 5656 aaKnown RBP3.49□□□□□ -1.85
Sox1-201ENSMUST00000180353 Krtap28-10A0A1Y7VP58 119 aa3.45□□□□□ -1.86
Sox1-201ENSMUST00000180353 Krtap28-13A0A087WQP5 138 aa3.44□□□□□ -1.86
Sox1-201ENSMUST00000180353 Gm39115A0A1B0GSH7 232 aa3.43□□□□□ -1.86
Sox1-201ENSMUST00000180353 A0A1Y7VLE6 161 aa3.43□□□□□ -1.86
Sox1-201ENSMUST00000180353 Gm11567Q9D141 195 aa3.4□□□□□ -1.86
Sox1-201ENSMUST00000180353 A030005K14RikA0A1Y7VNY1 122 aa3.36□□□□□ -1.87
Sox1-201ENSMUST00000180353 Krtap6-2O08884 159 aa3.27□□□□□ -1.89
Sox1-201ENSMUST00000180353 Krtap21-1Q925H4 128 aa3.26□□□□□ -1.89
Sox1-201ENSMUST00000180353 A030003K21RikA0A1Y7VIM3 128 aa3.22□□□□□ -1.89
Sox1-201ENSMUST00000180353 A0A1Y7VJ07 166 aa3.22□□□□□ -1.89
Sox1-201ENSMUST00000180353 Gm45618A0A1B0GSA0 219 aa3.1□□□□□ -1.91
Sox1-201ENSMUST00000180353 A030014E15RikA0A1Y7VJV2 120 aa3.1□□□□□ -1.91
Sox1-201ENSMUST00000180353 Gm7544A0A1Y7VJ58 118 aa3.09□□□□□ -1.91
Sox1-201ENSMUST00000180353 Gm6217A0A1Y7VJK9 128 aa3.02□□□□□ -1.93
Sox1-201ENSMUST00000180353 Gm29735A0A1B0GT06 219 aa2.63□□□□□ -1.99
Sox1-201ENSMUST00000180353 A0A286YCP9 139 aa2.5□□□□□ -2.01
Sox1-201ENSMUST00000180353 Krtap5-1Q64507 230 aa2.05□□□□□ -2.08
Sox1-201ENSMUST00000180353 Gm4559A4IF42 199 aa1.47□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 11.9 ms