RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 Krtap4-7Q9D732 168 aa5.21□□□□□ -1.57
Cpsf6-207ENSMUST00000176686 A0A1Y7VLE6 161 aa5.2□□□□□ -1.58
Cpsf6-207ENSMUST00000176686 Krtap28-13A0A087WQP5 138 aa5.15□□□□□ -1.59
Cpsf6-207ENSMUST00000176686 Sprr2gO70558 76 aa5.15□□□□□ -1.59
Cpsf6-207ENSMUST00000176686 Gm10272F7CZ33 110 aa5.13□□□□□ -1.59
Cpsf6-207ENSMUST00000176686 Lce1a1Q9CQH5 143 aa5.13□□□□□ -1.59
Cpsf6-207ENSMUST00000176686 Lce1eQ9D139 143 aa5.07□□□□□ -1.6
Cpsf6-207ENSMUST00000176686 4933428G20RikQ9D3X4 101 aa5.07□□□□□ -1.6
Cpsf6-207ENSMUST00000176686 Krtap20-2E9Q0A8 60 aa5.05□□□□□ -1.6
Cpsf6-207ENSMUST00000176686 Sprr2dO70555 85 aa5.05□□□□□ -1.6
Cpsf6-207ENSMUST00000176686 A030005K14RikA0A1Y7VNY1 122 aa5.03□□□□□ -1.6
Cpsf6-207ENSMUST00000176686 Gm11938Q9D3H4 131 aa4.99□□□□□ -1.61
Cpsf6-207ENSMUST00000176686 Eppk1Q8R0W0 6548 aa4.93□□□□□ -1.62
Cpsf6-207ENSMUST00000176686 Lce1cQ9D1C5 147 aa4.86□□□□□ -1.63
Cpsf6-207ENSMUST00000176686 A030005L19RikA0A1Y7VIU2 113 aa4.83□□□□□ -1.64
Cpsf6-207ENSMUST00000176686 Syne1Q6ZWR6 8799 aa4.79□□□□□ -1.64
Cpsf6-207ENSMUST00000176686 Krtap19-4Q925H7 84 aa4.78□□□□□ -1.64
Cpsf6-207ENSMUST00000176686 Macf1Q9QXZ0 7354 aaKnown RBP4.74□□□□□ -1.65
Cpsf6-207ENSMUST00000176686 Gm11639A0A1D5RLM8 5808 aa4.73□□□□□ -1.65
Cpsf6-207ENSMUST00000176686 Lce3bQ9CQM7 98 aa4.72□□□□□ -1.65
Cpsf6-207ENSMUST00000176686 Gm10100J3QK64 120 aa4.68□□□□□ -1.66
Cpsf6-207ENSMUST00000176686 Lce1fB9EJP6 147 aa4.67□□□□□ -1.66
Cpsf6-207ENSMUST00000176686 Gm7544A0A1Y7VJ58 118 aa4.62□□□□□ -1.67
Cpsf6-207ENSMUST00000176686 Krtap31-1Q9D644 177 aa4.62□□□□□ -1.67
Cpsf6-207ENSMUST00000176686 Gm11554B1AQB2 190 aa4.61□□□□□ -1.67
Cpsf6-207ENSMUST00000176686 Krtap31-2Q8CAY5 177 aa4.6□□□□□ -1.67
Cpsf6-207ENSMUST00000176686 Gm11559Q9D3H7 191 aa4.6□□□□□ -1.67
Cpsf6-207ENSMUST00000176686 Gm10142J3KMP7 120 aa4.58□□□□□ -1.68
Cpsf6-207ENSMUST00000176686 A0A1Y7VJ07 166 aa4.57□□□□□ -1.68
Cpsf6-207ENSMUST00000176686 Gpr98Q8VHN7 6298 aaKnown RBP4.56□□□□□ -1.68
Cpsf6-207ENSMUST00000176686 Krtap5-2Q9D5Z7 189 aa4.53□□□□□ -1.68
Cpsf6-207ENSMUST00000176686 Kmt2dQ6PDK2 5588 aa4.51□□□□□ -1.69
Cpsf6-207ENSMUST00000176686 Muc19Q6PZE0 7524 aa4.51□□□□□ -1.69
Cpsf6-207ENSMUST00000176686 Lce3cQ91V05 98 aa4.49□□□□□ -1.69
Cpsf6-207ENSMUST00000176686 Lce3eF8VQJ0 98 aa4.47□□□□□ -1.69
Cpsf6-207ENSMUST00000176686 Lce3fQ6PAI4 98 aa4.47□□□□□ -1.69
Cpsf6-207ENSMUST00000176686 Lce1kJ3QP15 125 aa4.45□□□□□ -1.7
Cpsf6-207ENSMUST00000176686 Lce3dE9Q8V1 98 aa4.44□□□□□ -1.7
Cpsf6-207ENSMUST00000176686 Sprr2hO70559 108 aa4.41□□□□□ -1.7
Cpsf6-207ENSMUST00000176686 ObscnA2AAJ9 8891 aaKnown RBP4.41□□□□□ -1.7
Cpsf6-207ENSMUST00000176686 A030014E15RikA0A1Y7VJV2 120 aa4.4□□□□□ -1.7
Cpsf6-207ENSMUST00000176686 Sprr2iO70560 76 aa4.39□□□□□ -1.71
Cpsf6-207ENSMUST00000176686 Gm4553A0A1B0GSA9 284 aa4.38□□□□□ -1.71
Cpsf6-207ENSMUST00000176686 Gm11568A2A4M2 211 aa4.33□□□□□ -1.72
Cpsf6-207ENSMUST00000176686 Krtap9-1Q64526 186 aa4.33□□□□□ -1.72
Cpsf6-207ENSMUST00000176686 Gm2431E9Q8S1 172 aa4.3□□□□□ -1.72
Cpsf6-207ENSMUST00000176686 Sprr2eO70556 76 aa4.29□□□□□ -1.72
Cpsf6-207ENSMUST00000176686 Lce3aQ497I5 98 aa4.28□□□□□ -1.72
Cpsf6-207ENSMUST00000176686 Mt1P02802 61 aaKnown RBP4.26□□□□□ -1.73
Cpsf6-207ENSMUST00000176686 Hmcn1D3YXG0 5634 aa4.17□□□□□ -1.74
Cpsf6-207ENSMUST00000176686 DstQ91ZU6 7393 aaKnown RBP4.16□□□□□ -1.74
Cpsf6-207ENSMUST00000176686 NebE9Q1W3 7152 aa4.15□□□□□ -1.75
Cpsf6-207ENSMUST00000176686 Sprr2fO70557 76 aa4.13□□□□□ -1.75
Cpsf6-207ENSMUST00000176686 Gm45337A0A1B0GS71 263 aa4.13□□□□□ -1.75
Cpsf6-207ENSMUST00000176686 A030003K21RikA0A1Y7VIM3 128 aa4.11□□□□□ -1.75
Cpsf6-207ENSMUST00000176686 Gm39115A0A1B0GSH7 232 aa3.99□□□□□ -1.77
Cpsf6-207ENSMUST00000176686 Krtap4-16Q91W93 202 aa3.97□□□□□ -1.77
Cpsf6-207ENSMUST00000176686 Gm40460A0A1B0GR10 244 aa3.95□□□□□ -1.78
Cpsf6-207ENSMUST00000176686 Gm7579A0A1B0GRJ4 243 aa3.95□□□□□ -1.78
Cpsf6-207ENSMUST00000176686 Krtap5-5Q2TA51 241 aa3.95□□□□□ -1.78
Cpsf6-207ENSMUST00000176686 Krtap5-4Q62220 223 aa3.95□□□□□ -1.78
Cpsf6-207ENSMUST00000176686 Gm10153A0A1B0GRL1 320 aa3.95□□□□□ -1.78
Cpsf6-207ENSMUST00000176686 Gm6217A0A1Y7VJK9 128 aa3.91□□□□□ -1.78
Cpsf6-207ENSMUST00000176686 Gm45618A0A1B0GSA0 219 aa3.81□□□□□ -1.8
Cpsf6-207ENSMUST00000176686 AhnakE9Q616 5656 aaKnown RBP3.79□□□□□ -1.8
Cpsf6-207ENSMUST00000176686 Gm10024A0A0A0MQA4 119 aa3.78□□□□□ -1.8
Cpsf6-207ENSMUST00000176686 Mt3P28184 68 aa3.78□□□□□ -1.8
Cpsf6-207ENSMUST00000176686 A0A286YCP9 139 aa3.6□□□□□ -1.83
Cpsf6-207ENSMUST00000176686 Muc16A0A140LJ72 8478 aa3.5□□□□□ -1.85
Cpsf6-207ENSMUST00000176686 1110025L11RikO09048 78 aa3.27□□□□□ -1.89
Cpsf6-207ENSMUST00000176686 Krtap6-5Q925H3 78 aa3.27□□□□□ -1.89
Cpsf6-207ENSMUST00000176686 Sprr2bO70554 98 aa3.03□□□□□ -1.93
Cpsf6-207ENSMUST00000176686 Gm10229O08631 77 aa2.89□□□□□ -1.95
Cpsf6-207ENSMUST00000176686 Gm29735A0A1B0GT06 219 aa2.86□□□□□ -1.95
Cpsf6-207ENSMUST00000176686 Gm11567Q9D141 195 aa2.78□□□□□ -1.96
Cpsf6-207ENSMUST00000176686 Krtap21-1Q925H4 128 aa2.69□□□□□ -1.98
Cpsf6-207ENSMUST00000176686 Phgr1Q8K0G7 91 aa2.61□□□□□ -1.99
Cpsf6-207ENSMUST00000176686 Krtap5-1Q64507 230 aa2.45□□□□□ -2.02
Cpsf6-207ENSMUST00000176686 Krtap6-2O08884 159 aa2.43□□□□□ -2.02
Cpsf6-207ENSMUST00000176686 Gm4559A4IF42 199 aa1.97□□□□□ -2.09
Retrieved 80 of 22,080 RNA–protein pairs in 9.8 ms