RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Sprr2eO70556 76 aa5.85□□□□□ -1.47
Pkp4-210ENSMUST00000168631 Gm10024A0A0A0MQA4 119 aa5.79□□□□□ -1.48
Pkp4-210ENSMUST00000168631 Krtap19-4Q925H7 84 aa5.73□□□□□ -1.49
Pkp4-210ENSMUST00000168631 ObscnA2AAJ9 8891 aaKnown RBP5.72□□□□□ -1.49
Pkp4-210ENSMUST00000168631 Macf1Q9QXZ0 7354 aaKnown RBP5.7□□□□□ -1.5
Pkp4-210ENSMUST00000168631 Krtap4-1Q3UUY3 169 aa5.65□□□□□ -1.5
Pkp4-210ENSMUST00000168631 Sprr2fO70557 76 aa5.61□□□□□ -1.51
Pkp4-210ENSMUST00000168631 Muc5bE9Q5I3 4800 aa5.59□□□□□ -1.52
Pkp4-210ENSMUST00000168631 Krtap4-9B1AQA9 244 aa5.57□□□□□ -1.52
Pkp4-210ENSMUST00000168631 Gm11564A2A4L9 201 aa5.51□□□□□ -1.53
Pkp4-210ENSMUST00000168631 Gm11563B1AQ90 168 aa5.51□□□□□ -1.53
Pkp4-210ENSMUST00000168631 Gm11595B1AQA7 289 aa5.51□□□□□ -1.53
Pkp4-210ENSMUST00000168631 Krtap4-8B1AQA8 209 aa5.51□□□□□ -1.53
Pkp4-210ENSMUST00000168631 Syne2Q6ZWQ0 6874 aaKnown RBP5.5□□□□□ -1.53
Pkp4-210ENSMUST00000168631 Gm11596B1AQB0 205 aa5.5□□□□□ -1.53
Pkp4-210ENSMUST00000168631 2300003K06RikA2A4M0 262 aa5.5□□□□□ -1.53
Pkp4-210ENSMUST00000168631 Krtap4-13Q9D7P3 165 aa5.43□□□□□ -1.54
Pkp4-210ENSMUST00000168631 SspoQ8CG65 4998 aa5.42□□□□□ -1.54
Pkp4-210ENSMUST00000168631 Krtap4-7Q9D732 168 aa5.42□□□□□ -1.54
Pkp4-210ENSMUST00000168631 Lce1kJ3QP15 125 aa5.34□□□□□ -1.56
Pkp4-210ENSMUST00000168631 Gm11938Q9D3H4 131 aa5.32□□□□□ -1.56
Pkp4-210ENSMUST00000168631 Gm11562A0PK51 136 aa5.31□□□□□ -1.56
Pkp4-210ENSMUST00000168631 Sprr2dO70555 85 aa5.3□□□□□ -1.56
Pkp4-210ENSMUST00000168631 Krtap31-1Q9D644 177 aa5.27□□□□□ -1.57
Pkp4-210ENSMUST00000168631 DstQ91ZU6 7393 aaKnown RBP5.21□□□□□ -1.58
Pkp4-210ENSMUST00000168631 Sprr2hO70559 108 aa5.19□□□□□ -1.58
Pkp4-210ENSMUST00000168631 Krtap4-16Q91W93 202 aa5.01□□□□□ -1.61
Pkp4-210ENSMUST00000168631 Muc19Q6PZE0 7524 aa4.99□□□□□ -1.61
Pkp4-210ENSMUST00000168631 NebE9Q1W3 7152 aa4.94□□□□□ -1.62
Pkp4-210ENSMUST00000168631 Mt3P28184 68 aa4.93□□□□□ -1.62
Pkp4-210ENSMUST00000168631 Lce1a1Q9CQH5 143 aa4.93□□□□□ -1.62
Pkp4-210ENSMUST00000168631 Gm11554B1AQB2 190 aa4.87□□□□□ -1.63
Pkp4-210ENSMUST00000168631 Krtap20-2E9Q0A8 60 aa4.76□□□□□ -1.65
Pkp4-210ENSMUST00000168631 Krtap6-3A0A087WQL6 57 aa4.72□□□□□ -1.65
Pkp4-210ENSMUST00000168631 Kmt2dQ6PDK2 5588 aa4.63□□□□□ -1.67
Pkp4-210ENSMUST00000168631 Mt1P02802 61 aaKnown RBP4.62□□□□□ -1.67
Pkp4-210ENSMUST00000168631 Sprr2bO70554 98 aa4.41□□□□□ -1.7
Pkp4-210ENSMUST00000168631 Gm11555B1AQ89 175 aa4.35□□□□□ -1.71
Pkp4-210ENSMUST00000168631 Eppk1Q8R0W0 6548 aa4.17□□□□□ -1.74
Pkp4-210ENSMUST00000168631 Gpr98Q8VHN7 6298 aaKnown RBP4.05□□□□□ -1.76
Pkp4-210ENSMUST00000168631 Krtap31-2Q8CAY5 177 aa3.93□□□□□ -1.78
Pkp4-210ENSMUST00000168631 Gm11639A0A1D5RLM8 5808 aa3.87□□□□□ -1.79
Pkp4-210ENSMUST00000168631 1110025L11RikO09048 78 aa3.83□□□□□ -1.8
Pkp4-210ENSMUST00000168631 Krtap6-5Q925H3 78 aa3.83□□□□□ -1.8
Pkp4-210ENSMUST00000168631 Gm11568A2A4M2 211 aa3.8□□□□□ -1.8
Pkp4-210ENSMUST00000168631 Krtap9-1Q64526 186 aa3.8□□□□□ -1.8
Pkp4-210ENSMUST00000168631 Hmcn1D3YXG0 5634 aa3.71□□□□□ -1.82
Pkp4-210ENSMUST00000168631 Gm11559Q9D3H7 191 aa3.69□□□□□ -1.82
Pkp4-210ENSMUST00000168631 Gm10229O08631 77 aa3.58□□□□□ -1.84
Pkp4-210ENSMUST00000168631 Phgr1Q8K0G7 91 aa3.38□□□□□ -1.87
Pkp4-210ENSMUST00000168631 Krtap5-2Q9D5Z7 189 aa3.34□□□□□ -1.88
Pkp4-210ENSMUST00000168631 Gm4553A0A1B0GSA9 284 aa3.14□□□□□ -1.91
Pkp4-210ENSMUST00000168631 AhnakE9Q616 5656 aaKnown RBP3.09□□□□□ -1.92
Pkp4-210ENSMUST00000168631 Gm10153A0A1B0GRL1 320 aa3.04□□□□□ -1.92
Pkp4-210ENSMUST00000168631 A0A1Y7VLE6 161 aa3.03□□□□□ -1.93
Pkp4-210ENSMUST00000168631 Gm2431E9Q8S1 172 aa2.99□□□□□ -1.93
Pkp4-210ENSMUST00000168631 A0A1Y7VJH8 109 aa2.96□□□□□ -1.94
Pkp4-210ENSMUST00000168631 Krtap6-2O08884 159 aa2.95□□□□□ -1.94
Pkp4-210ENSMUST00000168631 Krtap28-10A0A1Y7VP58 119 aa2.8□□□□□ -1.96
Pkp4-210ENSMUST00000168631 A030005L19RikA0A1Y7VIU2 113 aa2.78□□□□□ -1.96
Pkp4-210ENSMUST00000168631 Krtap21-1Q925H4 128 aa2.75□□□□□ -1.97
Pkp4-210ENSMUST00000168631 Gm45337A0A1B0GS71 263 aa2.75□□□□□ -1.97
Pkp4-210ENSMUST00000168631 A0A1Y7VJ07 166 aa2.68□□□□□ -1.98
Pkp4-210ENSMUST00000168631 Gm40460A0A1B0GR10 244 aa2.68□□□□□ -1.98
Pkp4-210ENSMUST00000168631 Gm7579A0A1B0GRJ4 243 aa2.68□□□□□ -1.98
Pkp4-210ENSMUST00000168631 Krtap5-5Q2TA51 241 aa2.68□□□□□ -1.98
Pkp4-210ENSMUST00000168631 Krtap5-4Q62220 223 aa2.68□□□□□ -1.98
Pkp4-210ENSMUST00000168631 Krtap28-13A0A087WQP5 138 aa2.64□□□□□ -1.99
Pkp4-210ENSMUST00000168631 Gm7544A0A1Y7VJ58 118 aa2.59□□□□□ -2
Pkp4-210ENSMUST00000168631 A030005K14RikA0A1Y7VNY1 122 aa2.58□□□□□ -2
Pkp4-210ENSMUST00000168631 A030003K21RikA0A1Y7VIM3 128 aa2.52□□□□□ -2.01
Pkp4-210ENSMUST00000168631 Gm11567Q9D141 195 aa2.48□□□□□ -2.01
Pkp4-210ENSMUST00000168631 Gm39115A0A1B0GSH7 232 aa2.43□□□□□ -2.02
Pkp4-210ENSMUST00000168631 Gm6217A0A1Y7VJK9 128 aa2.36□□□□□ -2.03
Pkp4-210ENSMUST00000168631 A030014E15RikA0A1Y7VJV2 120 aa2.32□□□□□ -2.04
Pkp4-210ENSMUST00000168631 Gm45618A0A1B0GSA0 219 aa2.02□□□□□ -2.09
Pkp4-210ENSMUST00000168631 Gm29735A0A1B0GT06 219 aa2.02□□□□□ -2.09
Pkp4-210ENSMUST00000168631 A0A286YCP9 139 aa1.87□□□□□ -2.11
Pkp4-210ENSMUST00000168631 Krtap5-1Q64507 230 aa1.61□□□□□ -2.15
Pkp4-210ENSMUST00000168631 Gm4559A4IF42 199 aa1.12□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 70.2 ms