RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Lce1hQ9D6R3 140 aa3.44□□□□□ -1.86
Nup50-201ENSMUST00000165443 Krtap4-2B1AQ85 167 aa3.44□□□□□ -1.86
Nup50-201ENSMUST00000165443 Lce1bQ9D149 137 aa3.42□□□□□ -1.86
Nup50-201ENSMUST00000165443 A030005K14RikA0A1Y7VNY1 122 aa3.42□□□□□ -1.86
Nup50-201ENSMUST00000165443 Lce1eQ9D139 143 aa3.41□□□□□ -1.86
Nup50-201ENSMUST00000165443 Sprr2eO70556 76 aa3.38□□□□□ -1.87
Nup50-201ENSMUST00000165443 Muc16A0A140LJ72 8478 aa3.36□□□□□ -1.87
Nup50-201ENSMUST00000165443 Muc5bE9Q5I3 4800 aa3.36□□□□□ -1.87
Nup50-201ENSMUST00000165443 A030003K21RikA0A1Y7VIM3 128 aa3.35□□□□□ -1.87
Nup50-201ENSMUST00000165443 Krtap31-1Q9D644 177 aa3.35□□□□□ -1.87
Nup50-201ENSMUST00000165443 Mt4P47945 62 aa3.3□□□□□ -1.88
Nup50-201ENSMUST00000165443 Krtap4-6Q3V4B7 195 aa3.28□□□□□ -1.88
Nup50-201ENSMUST00000165443 Sprr2dO70555 85 aa3.27□□□□□ -1.89
Nup50-201ENSMUST00000165443 A030005L19RikA0A1Y7VIU2 113 aa3.25□□□□□ -1.89
Nup50-201ENSMUST00000165443 A0A1Y7VJ07 166 aa3.25□□□□□ -1.89
Nup50-201ENSMUST00000165443 Krtap4-1Q3UUY3 169 aa3.25□□□□□ -1.89
Nup50-201ENSMUST00000165443 Sprr2hO70559 108 aa3.24□□□□□ -1.89
Nup50-201ENSMUST00000165443 Gm7544A0A1Y7VJ58 118 aa3.21□□□□□ -1.9
Nup50-201ENSMUST00000165443 Gm11596B1AQB0 205 aa3.17□□□□□ -1.9
Nup50-201ENSMUST00000165443 Gm6217A0A1Y7VJK9 128 aa3.17□□□□□ -1.9
Nup50-201ENSMUST00000165443 Gm11938Q9D3H4 131 aa3.15□□□□□ -1.91
Nup50-201ENSMUST00000165443 Gm11562A0PK51 136 aa3.12□□□□□ -1.91
Nup50-201ENSMUST00000165443 ObscnA2AAJ9 8891 aaKnown RBP3.12□□□□□ -1.91
Nup50-201ENSMUST00000165443 Gm11564A2A4L9 201 aa3.11□□□□□ -1.91
Nup50-201ENSMUST00000165443 Gm11563B1AQ90 168 aa3.11□□□□□ -1.91
Nup50-201ENSMUST00000165443 Gm11595B1AQA7 289 aa3.11□□□□□ -1.91
Nup50-201ENSMUST00000165443 Krtap4-8B1AQA8 209 aa3.11□□□□□ -1.91
Nup50-201ENSMUST00000165443 Krtap4-9B1AQA9 244 aa3.1□□□□□ -1.91
Nup50-201ENSMUST00000165443 Krtap31-2Q8CAY5 177 aa3.08□□□□□ -1.92
Nup50-201ENSMUST00000165443 2300003K06RikA2A4M0 262 aa3.05□□□□□ -1.92
Nup50-201ENSMUST00000165443 Krtap4-7Q9D732 168 aa3.05□□□□□ -1.92
Nup50-201ENSMUST00000165443 Gm11555B1AQ89 175 aa3.02□□□□□ -1.93
Nup50-201ENSMUST00000165443 A030014E15RikA0A1Y7VJV2 120 aa3.01□□□□□ -1.93
Nup50-201ENSMUST00000165443 Fsip2A2ARZ3 6995 aa3□□□□□ -1.93
Nup50-201ENSMUST00000165443 Krtap4-13Q9D7P3 165 aa2.99□□□□□ -1.93
Nup50-201ENSMUST00000165443 Syne2Q6ZWQ0 6874 aaKnown RBP2.99□□□□□ -1.93
Nup50-201ENSMUST00000165443 Macf1Q9QXZ0 7354 aaKnown RBP2.93□□□□□ -1.94
Nup50-201ENSMUST00000165443 Mt3P28184 68 aa2.92□□□□□ -1.94
Nup50-201ENSMUST00000165443 Lce1kJ3QP15 125 aa2.91□□□□□ -1.94
Nup50-201ENSMUST00000165443 Krtap6-3A0A087WQL6 57 aa2.89□□□□□ -1.95
Nup50-201ENSMUST00000165443 Krtap4-16Q91W93 202 aa2.88□□□□□ -1.95
Nup50-201ENSMUST00000165443 DstQ91ZU6 7393 aaKnown RBP2.86□□□□□ -1.95
Nup50-201ENSMUST00000165443 Lce1a1Q9CQH5 143 aa2.85□□□□□ -1.95
Nup50-201ENSMUST00000165443 Mt1P02802 61 aaKnown RBP2.83□□□□□ -1.96
Nup50-201ENSMUST00000165443 Eppk1Q8R0W0 6548 aa2.83□□□□□ -1.96
Nup50-201ENSMUST00000165443 A0A286YCP9 139 aa2.75□□□□□ -1.97
Nup50-201ENSMUST00000165443 Gm11554B1AQB2 190 aa2.7□□□□□ -1.98
Nup50-201ENSMUST00000165443 NebE9Q1W3 7152 aa2.64□□□□□ -1.99
Nup50-201ENSMUST00000165443 Sprr2bO70554 98 aa2.63□□□□□ -1.99
Nup50-201ENSMUST00000165443 Krtap20-2E9Q0A8 60 aa2.6□□□□□ -1.99
Nup50-201ENSMUST00000165443 Gpr98Q8VHN7 6298 aaKnown RBP2.57□□□□□ -2
Nup50-201ENSMUST00000165443 Kmt2dQ6PDK2 5588 aa2.52□□□□□ -2.01
Nup50-201ENSMUST00000165443 Muc19Q6PZE0 7524 aa2.5□□□□□ -2.01
Nup50-201ENSMUST00000165443 Gm11568A2A4M2 211 aa2.45□□□□□ -2.02
Nup50-201ENSMUST00000165443 Krtap9-1Q64526 186 aa2.45□□□□□ -2.02
Nup50-201ENSMUST00000165443 Krtap5-2Q9D5Z7 189 aa2.43□□□□□ -2.02
Nup50-201ENSMUST00000165443 Gm11559Q9D3H7 191 aa2.34□□□□□ -2.03
Nup50-201ENSMUST00000165443 Gm4553A0A1B0GSA9 284 aa2.26□□□□□ -2.05
Nup50-201ENSMUST00000165443 1110025L11RikO09048 78 aa2.26□□□□□ -2.05
Nup50-201ENSMUST00000165443 Krtap6-5Q925H3 78 aa2.26□□□□□ -2.05
Nup50-201ENSMUST00000165443 Gm11639A0A1D5RLM8 5808 aa2.24□□□□□ -2.05
Nup50-201ENSMUST00000165443 Gm10153A0A1B0GRL1 320 aa2.24□□□□□ -2.05
Nup50-201ENSMUST00000165443 Gm45337A0A1B0GS71 263 aa2.18□□□□□ -2.06
Nup50-201ENSMUST00000165443 Gm2431E9Q8S1 172 aa2.16□□□□□ -2.06
Nup50-201ENSMUST00000165443 Hmcn1D3YXG0 5634 aa2.15□□□□□ -2.07
Nup50-201ENSMUST00000165443 Gm40460A0A1B0GR10 244 aa2.12□□□□□ -2.07
Nup50-201ENSMUST00000165443 Gm7579A0A1B0GRJ4 243 aa2.12□□□□□ -2.07
Nup50-201ENSMUST00000165443 Krtap5-5Q2TA51 241 aa2.12□□□□□ -2.07
Nup50-201ENSMUST00000165443 Krtap5-4Q62220 223 aa2.12□□□□□ -2.07
Nup50-201ENSMUST00000165443 Gm10229O08631 77 aa2.12□□□□□ -2.07
Nup50-201ENSMUST00000165443 Phgr1Q8K0G7 91 aa1.99□□□□□ -2.09
Nup50-201ENSMUST00000165443 Gm39115A0A1B0GSH7 232 aa1.98□□□□□ -2.09
Nup50-201ENSMUST00000165443 AhnakE9Q616 5656 aaKnown RBP1.84□□□□□ -2.12
Nup50-201ENSMUST00000165443 Gm45618A0A1B0GSA0 219 aa1.83□□□□□ -2.12
Nup50-201ENSMUST00000165443 Krtap6-2O08884 159 aa1.71□□□□□ -2.14
Nup50-201ENSMUST00000165443 Gm29735A0A1B0GT06 219 aa1.66□□□□□ -2.14
Nup50-201ENSMUST00000165443 Krtap21-1Q925H4 128 aa1.61□□□□□ -2.15
Nup50-201ENSMUST00000165443 Gm11567Q9D141 195 aa1.6□□□□□ -2.15
Nup50-201ENSMUST00000165443 Krtap5-1Q64507 230 aa1.22□□□□□ -2.21
Nup50-201ENSMUST00000165443 Gm4559A4IF42 199 aa1.11□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 73.3 ms