RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Lce1bQ9D149 137 aa5.94□□□□□ -1.46
Hoxc4-202ENSMUST00000165375 Sprr2dO70555 85 aa5.87□□□□□ -1.47
Hoxc4-202ENSMUST00000165375 Gm11938Q9D3H4 131 aa5.87□□□□□ -1.47
Hoxc4-202ENSMUST00000165375 Fsip2A2ARZ3 6995 aa5.86□□□□□ -1.47
Hoxc4-202ENSMUST00000165375 Gm38119A0A0A6YX29 146 aa5.83□□□□□ -1.48
Hoxc4-202ENSMUST00000165375 A0A286YCP9 139 aa5.81□□□□□ -1.48
Hoxc4-202ENSMUST00000165375 Krtap4-13Q9D7P3 165 aa5.81□□□□□ -1.48
Hoxc4-202ENSMUST00000165375 Lce1eQ9D139 143 aa5.8□□□□□ -1.48
Hoxc4-202ENSMUST00000165375 Gm10272F7CZ33 110 aa5.77□□□□□ -1.49
Hoxc4-202ENSMUST00000165375 A030003K21RikA0A1Y7VIM3 128 aa5.75□□□□□ -1.49
Hoxc4-202ENSMUST00000165375 Sprr2kO70562 68 aa5.74□□□□□ -1.49
Hoxc4-202ENSMUST00000165375 2300003K06RikA2A4M0 262 aa5.72□□□□□ -1.49
Hoxc4-202ENSMUST00000165375 Gm6217A0A1Y7VJK9 128 aa5.61□□□□□ -1.51
Hoxc4-202ENSMUST00000165375 Krtap6-3A0A087WQL6 57 aa5.59□□□□□ -1.52
Hoxc4-202ENSMUST00000165375 Lce3bQ9CQM7 98 aa5.51□□□□□ -1.53
Hoxc4-202ENSMUST00000165375 Sprr2iO70560 76 aa5.5□□□□□ -1.53
Hoxc4-202ENSMUST00000165375 Lce1lQ9D1G7 135 aa5.49□□□□□ -1.53
Hoxc4-202ENSMUST00000165375 A0A1Y7VJ07 166 aa5.48□□□□□ -1.53
Hoxc4-202ENSMUST00000165375 Syne1Q6ZWR6 8799 aa5.48□□□□□ -1.53
Hoxc4-202ENSMUST00000165375 Krtap31-2Q8CAY5 177 aa5.39□□□□□ -1.55
Hoxc4-202ENSMUST00000165375 Krtap19-4Q925H7 84 aa5.38□□□□□ -1.55
Hoxc4-202ENSMUST00000165375 Lce1cQ9D1C5 147 aa5.38□□□□□ -1.55
Hoxc4-202ENSMUST00000165375 Gm10100J3QK64 120 aa5.36□□□□□ -1.55
Hoxc4-202ENSMUST00000165375 Lce1kJ3QP15 125 aa5.31□□□□□ -1.56
Hoxc4-202ENSMUST00000165375 Gm10142J3KMP7 120 aa5.3□□□□□ -1.56
Hoxc4-202ENSMUST00000165375 Krtap20-2E9Q0A8 60 aa5.24□□□□□ -1.57
Hoxc4-202ENSMUST00000165375 Lce1fB9EJP6 147 aa5.21□□□□□ -1.58
Hoxc4-202ENSMUST00000165375 Sprr2fO70557 76 aa5.21□□□□□ -1.58
Hoxc4-202ENSMUST00000165375 Lce1a1Q9CQH5 143 aa5.21□□□□□ -1.58
Hoxc4-202ENSMUST00000165375 Krtap5-2Q9D5Z7 189 aa5.21□□□□□ -1.58
Hoxc4-202ENSMUST00000165375 Sprr2eO70556 76 aa5.19□□□□□ -1.58
Hoxc4-202ENSMUST00000165375 Sprr2hO70559 108 aa5.14□□□□□ -1.59
Hoxc4-202ENSMUST00000165375 Gm11568A2A4M2 211 aa5.12□□□□□ -1.59
Hoxc4-202ENSMUST00000165375 Krtap9-1Q64526 186 aa5.12□□□□□ -1.59
Hoxc4-202ENSMUST00000165375 Lce3cQ91V05 98 aa5.12□□□□□ -1.59
Hoxc4-202ENSMUST00000165375 Krtap31-1Q9D644 177 aa5.12□□□□□ -1.59
Hoxc4-202ENSMUST00000165375 Lce3dE9Q8V1 98 aa5.08□□□□□ -1.6
Hoxc4-202ENSMUST00000165375 A030014E15RikA0A1Y7VJV2 120 aa5.07□□□□□ -1.6
Hoxc4-202ENSMUST00000165375 Mt1P02802 61 aaKnown RBP5.07□□□□□ -1.6
Hoxc4-202ENSMUST00000165375 Lce3eF8VQJ0 98 aa5□□□□□ -1.61
Hoxc4-202ENSMUST00000165375 Lce3fQ6PAI4 98 aa5□□□□□ -1.61
Hoxc4-202ENSMUST00000165375 Lce3aQ497I5 98 aa4.92□□□□□ -1.62
Hoxc4-202ENSMUST00000165375 Gm11559Q9D3H7 191 aa4.9□□□□□ -1.62
Hoxc4-202ENSMUST00000165375 ObscnA2AAJ9 8891 aaKnown RBP4.88□□□□□ -1.63
Hoxc4-202ENSMUST00000165375 Gm4553A0A1B0GSA9 284 aa4.87□□□□□ -1.63
Hoxc4-202ENSMUST00000165375 Gm10153A0A1B0GRL1 320 aa4.82□□□□□ -1.64
Hoxc4-202ENSMUST00000165375 Gm45337A0A1B0GS71 263 aa4.76□□□□□ -1.65
Hoxc4-202ENSMUST00000165375 Gm11554B1AQB2 190 aa4.73□□□□□ -1.65
Hoxc4-202ENSMUST00000165375 Macf1Q9QXZ0 7354 aaKnown RBP4.72□□□□□ -1.65
Hoxc4-202ENSMUST00000165375 Gm2431E9Q8S1 172 aa4.7□□□□□ -1.66
Hoxc4-202ENSMUST00000165375 Krtap4-16Q91W93 202 aa4.64□□□□□ -1.67
Hoxc4-202ENSMUST00000165375 Gm40460A0A1B0GR10 244 aa4.62□□□□□ -1.67
Hoxc4-202ENSMUST00000165375 Gm7579A0A1B0GRJ4 243 aa4.62□□□□□ -1.67
Hoxc4-202ENSMUST00000165375 Krtap5-5Q2TA51 241 aa4.62□□□□□ -1.67
Hoxc4-202ENSMUST00000165375 Krtap5-4Q62220 223 aa4.62□□□□□ -1.67
Hoxc4-202ENSMUST00000165375 Mt3P28184 68 aa4.61□□□□□ -1.67
Hoxc4-202ENSMUST00000165375 Kmt2dQ6PDK2 5588 aa4.59□□□□□ -1.67
Hoxc4-202ENSMUST00000165375 Hmcn1D3YXG0 5634 aa4.55□□□□□ -1.68
Hoxc4-202ENSMUST00000165375 Eppk1Q8R0W0 6548 aa4.4□□□□□ -1.71
Hoxc4-202ENSMUST00000165375 Gm39115A0A1B0GSH7 232 aa4.39□□□□□ -1.71
Hoxc4-202ENSMUST00000165375 Gm10024A0A0A0MQA4 119 aa4.22□□□□□ -1.73
Hoxc4-202ENSMUST00000165375 DstQ91ZU6 7393 aaKnown RBP4.16□□□□□ -1.74
Hoxc4-202ENSMUST00000165375 Muc19Q6PZE0 7524 aa4.15□□□□□ -1.74
Hoxc4-202ENSMUST00000165375 Gm11639A0A1D5RLM8 5808 aa4.14□□□□□ -1.75
Hoxc4-202ENSMUST00000165375 AhnakE9Q616 5656 aaKnown RBP3.93□□□□□ -1.78
Hoxc4-202ENSMUST00000165375 Gm45618A0A1B0GSA0 219 aa3.92□□□□□ -1.78
Hoxc4-202ENSMUST00000165375 NebE9Q1W3 7152 aa3.81□□□□□ -1.8
Hoxc4-202ENSMUST00000165375 Gpr98Q8VHN7 6298 aaKnown RBP3.81□□□□□ -1.8
Hoxc4-202ENSMUST00000165375 1110025L11RikO09048 78 aa3.77□□□□□ -1.81
Hoxc4-202ENSMUST00000165375 Krtap6-5Q925H3 78 aa3.77□□□□□ -1.81
Hoxc4-202ENSMUST00000165375 Muc16A0A140LJ72 8478 aa3.6□□□□□ -1.83
Hoxc4-202ENSMUST00000165375 Sprr2bO70554 98 aa3.49□□□□□ -1.85
Hoxc4-202ENSMUST00000165375 Gm29735A0A1B0GT06 219 aa3.46□□□□□ -1.86
Hoxc4-202ENSMUST00000165375 Gm10229O08631 77 aa3.36□□□□□ -1.87
Hoxc4-202ENSMUST00000165375 Gm11567Q9D141 195 aa3.35□□□□□ -1.87
Hoxc4-202ENSMUST00000165375 Krtap21-1Q925H4 128 aa3.07□□□□□ -1.92
Hoxc4-202ENSMUST00000165375 Phgr1Q8K0G7 91 aa2.99□□□□□ -1.93
Hoxc4-202ENSMUST00000165375 Krtap6-2O08884 159 aa2.9□□□□□ -1.94
Hoxc4-202ENSMUST00000165375 Krtap5-1Q64507 230 aa2.78□□□□□ -1.96
Hoxc4-202ENSMUST00000165375 Gm4559A4IF42 199 aa2.68□□□□□ -1.98
Retrieved 80 of 22,080 RNA–protein pairs in 135.5 ms