RNA–Protein interactions for RNA: ENSMUST00000160629.7

Cpsf4-205, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-205ENSMUST00000160629 Lce1eQ9D139 143 aa7.95□□□□□ -1.14
Cpsf4-205ENSMUST00000160629 A0A1Y7VJH8 109 aa7.95□□□□□ -1.14
Cpsf4-205ENSMUST00000160629 Lce3bQ9CQM7 98 aa7.81□□□□□ -1.16
Cpsf4-205ENSMUST00000160629 Gm11938Q9D3H4 131 aa7.81□□□□□ -1.16
Cpsf4-205ENSMUST00000160629 Gm20538F6Z9R1 75 aa7.78□□□□□ -1.16
Cpsf4-205ENSMUST00000160629 Krtap5-2Q9D5Z7 189 aa7.76□□□□□ -1.17
Cpsf4-205ENSMUST00000160629 Sprr2iO70560 76 aa7.72□□□□□ -1.17
Cpsf4-205ENSMUST00000160629 Syne1Q6ZWR6 8799 aa7.7□□□□□ -1.18
Cpsf4-205ENSMUST00000160629 Lce1kJ3QP15 125 aa7.7□□□□□ -1.18
Cpsf4-205ENSMUST00000160629 Gm11559Q9D3H7 191 aa7.57□□□□□ -1.2
Cpsf4-205ENSMUST00000160629 Sprr2dO70555 85 aa7.52□□□□□ -1.21
Cpsf4-205ENSMUST00000160629 Eppk1Q8R0W0 6548 aa7.47□□□□□ -1.21
Cpsf4-205ENSMUST00000160629 Gm11568A2A4M2 211 aa7.47□□□□□ -1.21
Cpsf4-205ENSMUST00000160629 Krtap9-1Q64526 186 aa7.47□□□□□ -1.21
Cpsf4-205ENSMUST00000160629 Ndufaf8A2AMZ4 74 aa7.43□□□□□ -1.22
Cpsf4-205ENSMUST00000160629 A030005L19RikA0A1Y7VIU2 113 aa7.41□□□□□ -1.22
Cpsf4-205ENSMUST00000160629 Gm11554B1AQB2 190 aa7.4□□□□□ -1.23
Cpsf4-205ENSMUST00000160629 Gm4553A0A1B0GSA9 284 aa7.39□□□□□ -1.23
Cpsf4-205ENSMUST00000160629 Macf1Q9QXZ0 7354 aaKnown RBP7.38□□□□□ -1.23
Cpsf4-205ENSMUST00000160629 Krtap19-4Q925H7 84 aa7.34□□□□□ -1.23
Cpsf4-205ENSMUST00000160629 Lce1fB9EJP6 147 aa7.27□□□□□ -1.25
Cpsf4-205ENSMUST00000160629 Lce1cQ9D1C5 147 aa7.27□□□□□ -1.25
Cpsf4-205ENSMUST00000160629 Lce3cQ91V05 98 aa7.25□□□□□ -1.25
Cpsf4-205ENSMUST00000160629 Kmt2dQ6PDK2 5588 aa7.25□□□□□ -1.25
Cpsf4-205ENSMUST00000160629 Mt1P02802 61 aaKnown RBP7.18□□□□□ -1.26
Cpsf4-205ENSMUST00000160629 Gm2431E9Q8S1 172 aa7.16□□□□□ -1.26
Cpsf4-205ENSMUST00000160629 Lce3dE9Q8V1 98 aa7.15□□□□□ -1.26
Cpsf4-205ENSMUST00000160629 4933428G20RikQ9D3X4 101 aa7.15□□□□□ -1.26
Cpsf4-205ENSMUST00000160629 Gm45337A0A1B0GS71 263 aa7.1□□□□□ -1.27
Cpsf4-205ENSMUST00000160629 Lce3eF8VQJ0 98 aa7.07□□□□□ -1.28
Cpsf4-205ENSMUST00000160629 Lce3fQ6PAI4 98 aa7.07□□□□□ -1.28
Cpsf4-205ENSMUST00000160629 Gm11639A0A1D5RLM8 5808 aa7□□□□□ -1.29
Cpsf4-205ENSMUST00000160629 Gm10153A0A1B0GRL1 320 aa6.96□□□□□ -1.3
Cpsf4-205ENSMUST00000160629 Gm10100J3QK64 120 aa6.88□□□□□ -1.31
Cpsf4-205ENSMUST00000160629 Hmcn1D3YXG0 5634 aa6.88□□□□□ -1.31
Cpsf4-205ENSMUST00000160629 Muc19Q6PZE0 7524 aa6.85□□□□□ -1.31
Cpsf4-205ENSMUST00000160629 Gm40460A0A1B0GR10 244 aa6.85□□□□□ -1.31
Cpsf4-205ENSMUST00000160629 Gm7579A0A1B0GRJ4 243 aa6.85□□□□□ -1.31
Cpsf4-205ENSMUST00000160629 Krtap5-5Q2TA51 241 aa6.85□□□□□ -1.31
Cpsf4-205ENSMUST00000160629 Krtap5-4Q62220 223 aa6.85□□□□□ -1.31
Cpsf4-205ENSMUST00000160629 ObscnA2AAJ9 8891 aaKnown RBP6.83□□□□□ -1.32
Cpsf4-205ENSMUST00000160629 Lce3aQ497I5 98 aa6.79□□□□□ -1.32
Cpsf4-205ENSMUST00000160629 Gm39115A0A1B0GSH7 232 aa6.71□□□□□ -1.34
Cpsf4-205ENSMUST00000160629 Gm10142J3KMP7 120 aa6.69□□□□□ -1.34
Cpsf4-205ENSMUST00000160629 Gpr98Q8VHN7 6298 aaKnown RBP6.62□□□□□ -1.35
Cpsf4-205ENSMUST00000160629 DstQ91ZU6 7393 aaKnown RBP6.59□□□□□ -1.35
Cpsf4-205ENSMUST00000160629 Mt3P28184 68 aa6.54□□□□□ -1.36
Cpsf4-205ENSMUST00000160629 Sprr2hO70559 108 aa6.49□□□□□ -1.37
Cpsf4-205ENSMUST00000160629 Gm9112A2AI92 75 aa6.47□□□□□ -1.37
Cpsf4-205ENSMUST00000160629 NebE9Q1W3 7152 aa6.32□□□□□ -1.4
Cpsf4-205ENSMUST00000160629 Krtap4-16Q91W93 202 aa6.3□□□□□ -1.4
Cpsf4-205ENSMUST00000160629 Sprr2fO70557 76 aa6.26□□□□□ -1.41
Cpsf4-205ENSMUST00000160629 A0A1Y7VLE6 161 aa6.25□□□□□ -1.41
Cpsf4-205ENSMUST00000160629 Gm45618A0A1B0GSA0 219 aa6.23□□□□□ -1.41
Cpsf4-205ENSMUST00000160629 Krtap31-2Q8CAY5 177 aa6.16□□□□□ -1.42
Cpsf4-205ENSMUST00000160629 AhnakE9Q616 5656 aaKnown RBP6.1□□□□□ -1.43
Cpsf4-205ENSMUST00000160629 Sprr2eO70556 76 aa6.06□□□□□ -1.44
Cpsf4-205ENSMUST00000160629 Krtap31-1Q9D644 177 aa5.77□□□□□ -1.49
Cpsf4-205ENSMUST00000160629 Gm10024A0A0A0MQA4 119 aa5.75□□□□□ -1.49
Cpsf4-205ENSMUST00000160629 1110025L11RikO09048 78 aa5.36□□□□□ -1.55
Cpsf4-205ENSMUST00000160629 Krtap6-5Q925H3 78 aa5.36□□□□□ -1.55
Cpsf4-205ENSMUST00000160629 Muc16A0A140LJ72 8478 aa5.17□□□□□ -1.58
Cpsf4-205ENSMUST00000160629 A0A1Y7VJ07 166 aa5.17□□□□□ -1.58
Cpsf4-205ENSMUST00000160629 Gm29735A0A1B0GT06 219 aa5.04□□□□□ -1.6
Cpsf4-205ENSMUST00000160629 A030005K14RikA0A1Y7VNY1 122 aa4.92□□□□□ -1.62
Cpsf4-205ENSMUST00000160629 Krtap28-13A0A087WQP5 138 aa4.9□□□□□ -1.62
Cpsf4-205ENSMUST00000160629 Gm10229O08631 77 aa4.77□□□□□ -1.65
Cpsf4-205ENSMUST00000160629 Gm11567Q9D141 195 aa4.77□□□□□ -1.65
Cpsf4-205ENSMUST00000160629 A030014E15RikA0A1Y7VJV2 120 aa4.69□□□□□ -1.66
Cpsf4-205ENSMUST00000160629 Krtap28-10A0A1Y7VP58 119 aa4.66□□□□□ -1.66
Cpsf4-205ENSMUST00000160629 Sprr2bO70554 98 aa4.65□□□□□ -1.67
Cpsf4-205ENSMUST00000160629 Krtap21-1Q925H4 128 aa4.35□□□□□ -1.71
Cpsf4-205ENSMUST00000160629 Gm7544A0A1Y7VJ58 118 aa4.3□□□□□ -1.72
Cpsf4-205ENSMUST00000160629 Krtap6-2O08884 159 aa4.12□□□□□ -1.75
Cpsf4-205ENSMUST00000160629 A030003K21RikA0A1Y7VIM3 128 aa3.9□□□□□ -1.78
Cpsf4-205ENSMUST00000160629 A0A286YCP9 139 aa3.88□□□□□ -1.79
Cpsf4-205ENSMUST00000160629 Phgr1Q8K0G7 91 aa3.87□□□□□ -1.79
Cpsf4-205ENSMUST00000160629 Krtap5-1Q64507 230 aa3.83□□□□□ -1.8
Cpsf4-205ENSMUST00000160629 Gm6217A0A1Y7VJK9 128 aa3.05□□□□□ -1.92
Cpsf4-205ENSMUST00000160629 Gm4559A4IF42 199 aa2.92□□□□□ -1.94
Retrieved 80 of 22,080 RNA–protein pairs in 45.8 ms