RNA–Protein interactions for RNA: ENSMUST00000160629.7

Cpsf4-205, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-205ENSMUST00000160629 Lce1eQ9D139 143 aa7,95□□□□□ -1,14
Cpsf4-205ENSMUST00000160629 A0A1Y7VJH8 109 aa7,95□□□□□ -1,14
Cpsf4-205ENSMUST00000160629 Lce3bQ9CQM7 98 aa7,81□□□□□ -1,16
Cpsf4-205ENSMUST00000160629 Gm11938Q9D3H4 131 aa7,81□□□□□ -1,16
Cpsf4-205ENSMUST00000160629 Gm20538F6Z9R1 75 aa7,78□□□□□ -1,16
Cpsf4-205ENSMUST00000160629 Krtap5-2Q9D5Z7 189 aa7,76□□□□□ -1,17
Cpsf4-205ENSMUST00000160629 Sprr2iO70560 76 aa7,72□□□□□ -1,17
Cpsf4-205ENSMUST00000160629 Syne1Q6ZWR6 8799 aa7,7□□□□□ -1,18
Cpsf4-205ENSMUST00000160629 Lce1kJ3QP15 125 aa7,7□□□□□ -1,18
Cpsf4-205ENSMUST00000160629 Gm11559Q9D3H7 191 aa7,57□□□□□ -1,2
Cpsf4-205ENSMUST00000160629 Sprr2dO70555 85 aa7,52□□□□□ -1,21
Cpsf4-205ENSMUST00000160629 Eppk1Q8R0W0 6548 aa7,47□□□□□ -1,21
Cpsf4-205ENSMUST00000160629 Gm11568A2A4M2 211 aa7,47□□□□□ -1,21
Cpsf4-205ENSMUST00000160629 Krtap9-1Q64526 186 aa7,47□□□□□ -1,21
Cpsf4-205ENSMUST00000160629 Ndufaf8A2AMZ4 74 aa7,43□□□□□ -1,22
Cpsf4-205ENSMUST00000160629 A030005L19RikA0A1Y7VIU2 113 aa7,41□□□□□ -1,22
Cpsf4-205ENSMUST00000160629 Gm11554B1AQB2 190 aa7,4□□□□□ -1,23
Cpsf4-205ENSMUST00000160629 Gm4553A0A1B0GSA9 284 aa7,39□□□□□ -1,23
Cpsf4-205ENSMUST00000160629 Macf1Q9QXZ0 7354 aaKnown RBP7,38□□□□□ -1,23
Cpsf4-205ENSMUST00000160629 Krtap19-4Q925H7 84 aa7,34□□□□□ -1,23
Cpsf4-205ENSMUST00000160629 Lce1fB9EJP6 147 aa7,27□□□□□ -1,25
Cpsf4-205ENSMUST00000160629 Lce1cQ9D1C5 147 aa7,27□□□□□ -1,25
Cpsf4-205ENSMUST00000160629 Lce3cQ91V05 98 aa7,25□□□□□ -1,25
Cpsf4-205ENSMUST00000160629 Kmt2dQ6PDK2 5588 aa7,25□□□□□ -1,25
Cpsf4-205ENSMUST00000160629 Mt1P02802 61 aaKnown RBP7,18□□□□□ -1,26
Cpsf4-205ENSMUST00000160629 Gm2431E9Q8S1 172 aa7,16□□□□□ -1,26
Cpsf4-205ENSMUST00000160629 Lce3dE9Q8V1 98 aa7,15□□□□□ -1,26
Cpsf4-205ENSMUST00000160629 4933428G20RikQ9D3X4 101 aa7,15□□□□□ -1,26
Cpsf4-205ENSMUST00000160629 Gm45337A0A1B0GS71 263 aa7,1□□□□□ -1,27
Cpsf4-205ENSMUST00000160629 Lce3eF8VQJ0 98 aa7,07□□□□□ -1,28
Cpsf4-205ENSMUST00000160629 Lce3fQ6PAI4 98 aa7,07□□□□□ -1,28
Cpsf4-205ENSMUST00000160629 Gm11639A0A1D5RLM8 5808 aa7□□□□□ -1,29
Cpsf4-205ENSMUST00000160629 Gm10153A0A1B0GRL1 320 aa6,96□□□□□ -1,3
Cpsf4-205ENSMUST00000160629 Gm10100J3QK64 120 aa6,88□□□□□ -1,31
Cpsf4-205ENSMUST00000160629 Hmcn1D3YXG0 5634 aa6,88□□□□□ -1,31
Cpsf4-205ENSMUST00000160629 Muc19Q6PZE0 7524 aa6,85□□□□□ -1,31
Cpsf4-205ENSMUST00000160629 Gm40460A0A1B0GR10 244 aa6,85□□□□□ -1,31
Cpsf4-205ENSMUST00000160629 Gm7579A0A1B0GRJ4 243 aa6,85□□□□□ -1,31
Cpsf4-205ENSMUST00000160629 Krtap5-5Q2TA51 241 aa6,85□□□□□ -1,31
Cpsf4-205ENSMUST00000160629 Krtap5-4Q62220 223 aa6,85□□□□□ -1,31
Cpsf4-205ENSMUST00000160629 ObscnA2AAJ9 8891 aaKnown RBP6,83□□□□□ -1,32
Cpsf4-205ENSMUST00000160629 Lce3aQ497I5 98 aa6,79□□□□□ -1,32
Cpsf4-205ENSMUST00000160629 Gm39115A0A1B0GSH7 232 aa6,71□□□□□ -1,34
Cpsf4-205ENSMUST00000160629 Gm10142J3KMP7 120 aa6,69□□□□□ -1,34
Cpsf4-205ENSMUST00000160629 Gpr98Q8VHN7 6298 aaKnown RBP6,62□□□□□ -1,35
Cpsf4-205ENSMUST00000160629 DstQ91ZU6 7393 aaKnown RBP6,59□□□□□ -1,35
Cpsf4-205ENSMUST00000160629 Mt3P28184 68 aa6,54□□□□□ -1,36
Cpsf4-205ENSMUST00000160629 Sprr2hO70559 108 aa6,49□□□□□ -1,37
Cpsf4-205ENSMUST00000160629 Gm9112A2AI92 75 aa6,47□□□□□ -1,37
Cpsf4-205ENSMUST00000160629 NebE9Q1W3 7152 aa6,32□□□□□ -1,4
Cpsf4-205ENSMUST00000160629 Krtap4-16Q91W93 202 aa6,3□□□□□ -1,4
Cpsf4-205ENSMUST00000160629 Sprr2fO70557 76 aa6,26□□□□□ -1,41
Cpsf4-205ENSMUST00000160629 A0A1Y7VLE6 161 aa6,25□□□□□ -1,41
Cpsf4-205ENSMUST00000160629 Gm45618A0A1B0GSA0 219 aa6,23□□□□□ -1,41
Cpsf4-205ENSMUST00000160629 Krtap31-2Q8CAY5 177 aa6,16□□□□□ -1,42
Cpsf4-205ENSMUST00000160629 AhnakE9Q616 5656 aaKnown RBP6,1□□□□□ -1,43
Cpsf4-205ENSMUST00000160629 Sprr2eO70556 76 aa6,06□□□□□ -1,44
Cpsf4-205ENSMUST00000160629 Krtap31-1Q9D644 177 aa5,77□□□□□ -1,49
Cpsf4-205ENSMUST00000160629 Gm10024A0A0A0MQA4 119 aa5,75□□□□□ -1,49
Cpsf4-205ENSMUST00000160629 1110025L11RikO09048 78 aa5,36□□□□□ -1,55
Cpsf4-205ENSMUST00000160629 Krtap6-5Q925H3 78 aa5,36□□□□□ -1,55
Cpsf4-205ENSMUST00000160629 Muc16A0A140LJ72 8478 aa5,17□□□□□ -1,58
Cpsf4-205ENSMUST00000160629 A0A1Y7VJ07 166 aa5,17□□□□□ -1,58
Cpsf4-205ENSMUST00000160629 Gm29735A0A1B0GT06 219 aa5,04□□□□□ -1,6
Cpsf4-205ENSMUST00000160629 A030005K14RikA0A1Y7VNY1 122 aa4,92□□□□□ -1,62
Cpsf4-205ENSMUST00000160629 Krtap28-13A0A087WQP5 138 aa4,9□□□□□ -1,62
Cpsf4-205ENSMUST00000160629 Gm10229O08631 77 aa4,77□□□□□ -1,65
Cpsf4-205ENSMUST00000160629 Gm11567Q9D141 195 aa4,77□□□□□ -1,65
Cpsf4-205ENSMUST00000160629 A030014E15RikA0A1Y7VJV2 120 aa4,69□□□□□ -1,66
Cpsf4-205ENSMUST00000160629 Krtap28-10A0A1Y7VP58 119 aa4,66□□□□□ -1,66
Cpsf4-205ENSMUST00000160629 Sprr2bO70554 98 aa4,65□□□□□ -1,67
Cpsf4-205ENSMUST00000160629 Krtap21-1Q925H4 128 aa4,35□□□□□ -1,71
Cpsf4-205ENSMUST00000160629 Gm7544A0A1Y7VJ58 118 aa4,3□□□□□ -1,72
Cpsf4-205ENSMUST00000160629 Krtap6-2O08884 159 aa4,12□□□□□ -1,75
Cpsf4-205ENSMUST00000160629 A030003K21RikA0A1Y7VIM3 128 aa3,9□□□□□ -1,78
Cpsf4-205ENSMUST00000160629 A0A286YCP9 139 aa3,88□□□□□ -1,79
Cpsf4-205ENSMUST00000160629 Phgr1Q8K0G7 91 aa3,87□□□□□ -1,79
Cpsf4-205ENSMUST00000160629 Krtap5-1Q64507 230 aa3,83□□□□□ -1,8
Cpsf4-205ENSMUST00000160629 Gm6217A0A1Y7VJK9 128 aa3,05□□□□□ -1,92
Cpsf4-205ENSMUST00000160629 Gm4559A4IF42 199 aa2,92□□□□□ -1,94
Retrieved 80 of 22,080 RNA–protein pairs in 42,8 ms