RNA–Protein interactions for RNA: ENSMUST00000159910.7

Vcan-206, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 8,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-206ENSMUST00000159910 Krtap28-10A0A1Y7VP58 119 aa2.39□□□□□ -2.03
Vcan-206ENSMUST00000159910 Gm10061D3Z714 54 aa2.37□□□□□ -2.03
Vcan-206ENSMUST00000159910 Fat4Q2PZL6 4981 aa2.37□□□□□ -2.03
Vcan-206ENSMUST00000159910 Krtap1-3A2A588 173 aa2.36□□□□□ -2.03
Vcan-206ENSMUST00000159910 SspoQ8CG65 4998 aa2.35□□□□□ -2.03
Vcan-206ENSMUST00000159910 A0A1Y7VJH8 109 aa2.34□□□□□ -2.04
Vcan-206ENSMUST00000159910 Gm11569B1AQB1 180 aa2.31□□□□□ -2.04
Vcan-206ENSMUST00000159910 Gm7544A0A1Y7VJ58 118 aa2.27□□□□□ -2.05
Vcan-206ENSMUST00000159910 Gm11938Q9D3H4 131 aa2.26□□□□□ -2.05
Vcan-206ENSMUST00000159910 Mdn1A2ANY6 5589 aaKnown RBP2.25□□□□□ -2.05
Vcan-206ENSMUST00000159910 Mt4P47945 62 aa2.21□□□□□ -2.05
Vcan-206ENSMUST00000159910 Krtap4-2B1AQ85 167 aa2.21□□□□□ -2.06
Vcan-206ENSMUST00000159910 Gm11562A0PK51 136 aa2.19□□□□□ -2.06
Vcan-206ENSMUST00000159910 Muc5bE9Q5I3 4800 aa2.18□□□□□ -2.06
Vcan-206ENSMUST00000159910 Sprr2bO70554 98 aa2.16□□□□□ -2.06
Vcan-206ENSMUST00000159910 A030005L19RikA0A1Y7VIU2 113 aa2.15□□□□□ -2.07
Vcan-206ENSMUST00000159910 Krtap4-6Q3V4B7 195 aa2.13□□□□□ -2.07
Vcan-206ENSMUST00000159910 Syne1Q6ZWR6 8799 aa2.11□□□□□ -2.07
Vcan-206ENSMUST00000159910 Krtap4-16Q91W93 202 aa2.09□□□□□ -2.07
Vcan-206ENSMUST00000159910 Krtap28-13A0A087WQP5 138 aa2.09□□□□□ -2.08
Vcan-206ENSMUST00000159910 Krtap4-7Q9D732 168 aa2.08□□□□□ -2.08
Vcan-206ENSMUST00000159910 Krtap17-1A2A5X6 109 aa2.07□□□□□ -2.08
Vcan-206ENSMUST00000159910 Mt1P02802 61 aaKnown RBP2.06□□□□□ -2.08
Vcan-206ENSMUST00000159910 Gm11596B1AQB0 205 aa2.05□□□□□ -2.08
Vcan-206ENSMUST00000159910 2300003K06RikA2A4M0 262 aa2.05□□□□□ -2.08
Vcan-206ENSMUST00000159910 Krtap4-1Q3UUY3 169 aa2.03□□□□□ -2.08
Vcan-206ENSMUST00000159910 A0A1Y7VJ07 166 aa2.03□□□□□ -2.08
Vcan-206ENSMUST00000159910 Lce1a2Q9D1K4 149 aa2.03□□□□□ -2.08
Vcan-206ENSMUST00000159910 Gm11564A2A4L9 201 aa2.02□□□□□ -2.09
Vcan-206ENSMUST00000159910 Gm11563B1AQ90 168 aa2.02□□□□□ -2.09
Vcan-206ENSMUST00000159910 Gm11595B1AQA7 289 aa2.02□□□□□ -2.09
Vcan-206ENSMUST00000159910 Krtap4-8B1AQA8 209 aa2.02□□□□□ -2.09
Vcan-206ENSMUST00000159910 Krtap4-9B1AQA9 244 aa2.01□□□□□ -2.09
Vcan-206ENSMUST00000159910 Lce1kJ3QP15 125 aa2.01□□□□□ -2.09
Vcan-206ENSMUST00000159910 Krtap6-3A0A087WQL6 57 aa1.97□□□□□ -2.09
Vcan-206ENSMUST00000159910 ObscnA2AAJ9 8891 aaKnown RBP1.94□□□□□ -2.1
Vcan-206ENSMUST00000159910 Krtap4-13Q9D7P3 165 aa1.94□□□□□ -2.1
Vcan-206ENSMUST00000159910 Gm11555B1AQ89 175 aa1.93□□□□□ -2.1
Vcan-206ENSMUST00000159910 Lce1a1Q9CQH5 143 aa1.93□□□□□ -2.1
Vcan-206ENSMUST00000159910 Syne2Q6ZWQ0 6874 aaKnown RBP1.89□□□□□ -2.11
Vcan-206ENSMUST00000159910 Eppk1Q8R0W0 6548 aa1.8□□□□□ -2.12
Vcan-206ENSMUST00000159910 Muc16A0A140LJ72 8478 aa1.79□□□□□ -2.12
Vcan-206ENSMUST00000159910 Fsip2A2ARZ3 6995 aa1.79□□□□□ -2.12
Vcan-206ENSMUST00000159910 Gm11554B1AQB2 190 aa1.76□□□□□ -2.13
Vcan-206ENSMUST00000159910 Krtap20-2E9Q0A8 60 aa1.74□□□□□ -2.13
Vcan-206ENSMUST00000159910 A030014E15RikA0A1Y7VJV2 120 aa1.68□□□□□ -2.14
Vcan-206ENSMUST00000159910 Gm11639A0A1D5RLM8 5808 aa1.68□□□□□ -2.14
Vcan-206ENSMUST00000159910 A0A286YCP9 139 aa1.67□□□□□ -2.14
Vcan-206ENSMUST00000159910 Krtap5-2Q9D5Z7 189 aa1.63□□□□□ -2.15
Vcan-206ENSMUST00000159910 Kmt2dQ6PDK2 5588 aa1.62□□□□□ -2.15
Vcan-206ENSMUST00000159910 1110025L11RikO09048 78 aa1.61□□□□□ -2.15
Vcan-206ENSMUST00000159910 Krtap6-5Q925H3 78 aa1.61□□□□□ -2.15
Vcan-206ENSMUST00000159910 Gm11568A2A4M2 211 aa1.56□□□□□ -2.16
Vcan-206ENSMUST00000159910 DstQ91ZU6 7393 aaKnown RBP1.56□□□□□ -2.16
Vcan-206ENSMUST00000159910 Macf1Q9QXZ0 7354 aaKnown RBP1.55□□□□□ -2.16
Vcan-206ENSMUST00000159910 Gm10153A0A1B0GRL1 320 aa1.54□□□□□ -2.16
Vcan-206ENSMUST00000159910 Gm10229O08631 77 aa1.54□□□□□ -2.16
Vcan-206ENSMUST00000159910 Gpr98Q8VHN7 6298 aaKnown RBP1.54□□□□□ -2.16
Vcan-206ENSMUST00000159910 Gm45337A0A1B0GS71 263 aa1.53□□□□□ -2.16
Vcan-206ENSMUST00000159910 Gm4553A0A1B0GSA9 284 aa1.51□□□□□ -2.17
Vcan-206ENSMUST00000159910 Gm40460A0A1B0GR10 244 aa1.51□□□□□ -2.17
Vcan-206ENSMUST00000159910 Gm7579A0A1B0GRJ4 243 aa1.51□□□□□ -2.17
Vcan-206ENSMUST00000159910 Krtap5-5Q2TA51 241 aa1.51□□□□□ -2.17
Vcan-206ENSMUST00000159910 Krtap5-4Q62220 223 aa1.51□□□□□ -2.17
Vcan-206ENSMUST00000159910 Hmcn1D3YXG0 5634 aa1.5□□□□□ -2.17
Vcan-206ENSMUST00000159910 Krtap9-1Q64526 186 aa1.48□□□□□ -2.17
Vcan-206ENSMUST00000159910 Gm11567Q9D141 195 aa1.47□□□□□ -2.17
Vcan-206ENSMUST00000159910 Phgr1Q8K0G7 91 aa1.47□□□□□ -2.17
Vcan-206ENSMUST00000159910 NebE9Q1W3 7152 aa1.46□□□□□ -2.18
Vcan-206ENSMUST00000159910 AhnakE9Q616 5656 aaKnown RBP1.45□□□□□ -2.18
Vcan-206ENSMUST00000159910 Gm39115A0A1B0GSH7 232 aa1.41□□□□□ -2.18
Vcan-206ENSMUST00000159910 Gm2431E9Q8S1 172 aa1.41□□□□□ -2.18
Vcan-206ENSMUST00000159910 Gm11559Q9D3H7 191 aa1.41□□□□□ -2.18
Vcan-206ENSMUST00000159910 Muc19Q6PZE0 7524 aa1.33□□□□□ -2.2
Vcan-206ENSMUST00000159910 Gm45618A0A1B0GSA0 219 aa1.28□□□□□ -2.2
Vcan-206ENSMUST00000159910 Krtap6-2O08884 159 aa1.23□□□□□ -2.21
Vcan-206ENSMUST00000159910 Gm29735A0A1B0GT06 219 aa1.15□□□□□ -2.22
Vcan-206ENSMUST00000159910 Krtap21-1Q925H4 128 aa1.1□□□□□ -2.23
Vcan-206ENSMUST00000159910 Gm4559A4IF42 199 aa0.87□□□□□ -2.27
Vcan-206ENSMUST00000159910 Krtap5-1Q64507 230 aa0.82□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 231.2 ms