RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Gm11562A0PK51 136 aa5.37□□□□□ -1.55
Prpf40b-212ENSMUST00000145482 Lce3bQ9CQM7 98 aa5.36□□□□□ -1.55
Prpf40b-212ENSMUST00000145482 Krtap31-1Q9D644 177 aa5.36□□□□□ -1.55
Prpf40b-212ENSMUST00000145482 Gm10142J3KMP7 120 aa5.36□□□□□ -1.55
Prpf40b-212ENSMUST00000145482 Lce1fB9EJP6 147 aa5.35□□□□□ -1.55
Prpf40b-212ENSMUST00000145482 Lce1a1Q9CQH5 143 aa5.35□□□□□ -1.55
Prpf40b-212ENSMUST00000145482 Krtap4-13Q9D7P3 165 aa5.33□□□□□ -1.56
Prpf40b-212ENSMUST00000145482 Sprr2dO70555 85 aa5.33□□□□□ -1.56
Prpf40b-212ENSMUST00000145482 Sprr2kO70562 68 aa5.3□□□□□ -1.56
Prpf40b-212ENSMUST00000145482 Lce3cQ91V05 98 aa5.25□□□□□ -1.57
Prpf40b-212ENSMUST00000145482 2300003K06RikA2A4M0 262 aa5.21□□□□□ -1.58
Prpf40b-212ENSMUST00000145482 Lce3dE9Q8V1 98 aa5.2□□□□□ -1.58
Prpf40b-212ENSMUST00000145482 Lce1bQ9D149 137 aa5.14□□□□□ -1.59
Prpf40b-212ENSMUST00000145482 Krtap4-16Q91W93 202 aa5.08□□□□□ -1.6
Prpf40b-212ENSMUST00000145482 Krtap4-7Q9D732 168 aa5.06□□□□□ -1.6
Prpf40b-212ENSMUST00000145482 Sprr2iO70560 76 aa5.05□□□□□ -1.6
Prpf40b-212ENSMUST00000145482 Lce1lQ9D1G7 135 aa5.05□□□□□ -1.6
Prpf40b-212ENSMUST00000145482 Lce3eF8VQJ0 98 aa5.03□□□□□ -1.6
Prpf40b-212ENSMUST00000145482 Lce3fQ6PAI4 98 aa5.03□□□□□ -1.6
Prpf40b-212ENSMUST00000145482 ObscnA2AAJ9 8891 aaKnown RBP5□□□□□ -1.61
Prpf40b-212ENSMUST00000145482 Lce3aQ497I5 98 aa4.97□□□□□ -1.61
Prpf40b-212ENSMUST00000145482 Krtap19-4Q925H7 84 aa4.95□□□□□ -1.62
Prpf40b-212ENSMUST00000145482 Sprr2fO70557 76 aa4.87□□□□□ -1.63
Prpf40b-212ENSMUST00000145482 Sprr2hO70559 108 aa4.86□□□□□ -1.63
Prpf40b-212ENSMUST00000145482 Lce1kJ3QP15 125 aa4.85□□□□□ -1.63
Prpf40b-212ENSMUST00000145482 Krtap6-3A0A087WQL6 57 aa4.8□□□□□ -1.64
Prpf40b-212ENSMUST00000145482 Macf1Q9QXZ0 7354 aaKnown RBP4.8□□□□□ -1.64
Prpf40b-212ENSMUST00000145482 Krtap20-2E9Q0A8 60 aa4.76□□□□□ -1.65
Prpf40b-212ENSMUST00000145482 Sprr2eO70556 76 aa4.72□□□□□ -1.65
Prpf40b-212ENSMUST00000145482 Krtap31-2Q8CAY5 177 aa4.62□□□□□ -1.67
Prpf40b-212ENSMUST00000145482 A0A1Y7VJH8 109 aa4.56□□□□□ -1.68
Prpf40b-212ENSMUST00000145482 Gm11568A2A4M2 211 aa4.54□□□□□ -1.68
Prpf40b-212ENSMUST00000145482 Krtap9-1Q64526 186 aa4.54□□□□□ -1.68
Prpf40b-212ENSMUST00000145482 Mt1P02802 61 aaKnown RBP4.47□□□□□ -1.69
Prpf40b-212ENSMUST00000145482 Gm11554B1AQB2 190 aa4.41□□□□□ -1.7
Prpf40b-212ENSMUST00000145482 Krtap5-2Q9D5Z7 189 aa4.41□□□□□ -1.7
Prpf40b-212ENSMUST00000145482 Gm10024A0A0A0MQA4 119 aa4.3□□□□□ -1.72
Prpf40b-212ENSMUST00000145482 Kmt2dQ6PDK2 5588 aa4.25□□□□□ -1.73
Prpf40b-212ENSMUST00000145482 Muc19Q6PZE0 7524 aa4.25□□□□□ -1.73
Prpf40b-212ENSMUST00000145482 Gm11559Q9D3H7 191 aa4.24□□□□□ -1.73
Prpf40b-212ENSMUST00000145482 Hmcn1D3YXG0 5634 aa4.23□□□□□ -1.73
Prpf40b-212ENSMUST00000145482 Gm10153A0A1B0GRL1 320 aa4.11□□□□□ -1.75
Prpf40b-212ENSMUST00000145482 Gm4553A0A1B0GSA9 284 aa4.1□□□□□ -1.75
Prpf40b-212ENSMUST00000145482 Gm2431E9Q8S1 172 aa4.05□□□□□ -1.76
Prpf40b-212ENSMUST00000145482 Mt3P28184 68 aa4.05□□□□□ -1.76
Prpf40b-212ENSMUST00000145482 DstQ91ZU6 7393 aaKnown RBP4.02□□□□□ -1.77
Prpf40b-212ENSMUST00000145482 Gm45337A0A1B0GS71 263 aa3.96□□□□□ -1.77
Prpf40b-212ENSMUST00000145482 Eppk1Q8R0W0 6548 aa3.96□□□□□ -1.78
Prpf40b-212ENSMUST00000145482 NebE9Q1W3 7152 aa3.88□□□□□ -1.79
Prpf40b-212ENSMUST00000145482 Gm11639A0A1D5RLM8 5808 aa3.85□□□□□ -1.79
Prpf40b-212ENSMUST00000145482 A0A1Y7VLE6 161 aa3.85□□□□□ -1.79
Prpf40b-212ENSMUST00000145482 Gm40460A0A1B0GR10 244 aa3.81□□□□□ -1.8
Prpf40b-212ENSMUST00000145482 Gm7579A0A1B0GRJ4 243 aa3.81□□□□□ -1.8
Prpf40b-212ENSMUST00000145482 Krtap5-5Q2TA51 241 aa3.81□□□□□ -1.8
Prpf40b-212ENSMUST00000145482 Krtap5-4Q62220 223 aa3.81□□□□□ -1.8
Prpf40b-212ENSMUST00000145482 A030005L19RikA0A1Y7VIU2 113 aa3.78□□□□□ -1.8
Prpf40b-212ENSMUST00000145482 Gm39115A0A1B0GSH7 232 aa3.61□□□□□ -1.83
Prpf40b-212ENSMUST00000145482 Gpr98Q8VHN7 6298 aaKnown RBP3.56□□□□□ -1.84
Prpf40b-212ENSMUST00000145482 AhnakE9Q616 5656 aaKnown RBP3.46□□□□□ -1.86
Prpf40b-212ENSMUST00000145482 1110025L11RikO09048 78 aa3.33□□□□□ -1.88
Prpf40b-212ENSMUST00000145482 Krtap6-5Q925H3 78 aa3.33□□□□□ -1.88
Prpf40b-212ENSMUST00000145482 Gm45618A0A1B0GSA0 219 aa3.17□□□□□ -1.9
Prpf40b-212ENSMUST00000145482 Sprr2bO70554 98 aa3.1□□□□□ -1.91
Prpf40b-212ENSMUST00000145482 A0A1Y7VJ07 166 aa3.08□□□□□ -1.92
Prpf40b-212ENSMUST00000145482 Phgr1Q8K0G7 91 aa3.05□□□□□ -1.92
Prpf40b-212ENSMUST00000145482 Gm11567Q9D141 195 aa3□□□□□ -1.93
Prpf40b-212ENSMUST00000145482 Gm10229O08631 77 aa2.98□□□□□ -1.93
Prpf40b-212ENSMUST00000145482 Gm29735A0A1B0GT06 219 aa2.82□□□□□ -1.96
Prpf40b-212ENSMUST00000145482 A030005K14RikA0A1Y7VNY1 122 aa2.8□□□□□ -1.96
Prpf40b-212ENSMUST00000145482 Krtap28-13A0A087WQP5 138 aa2.78□□□□□ -1.97
Prpf40b-212ENSMUST00000145482 Krtap21-1Q925H4 128 aa2.7□□□□□ -1.98
Prpf40b-212ENSMUST00000145482 A030014E15RikA0A1Y7VJV2 120 aa2.67□□□□□ -1.98
Prpf40b-212ENSMUST00000145482 A0A286YCP9 139 aa2.65□□□□□ -1.98
Prpf40b-212ENSMUST00000145482 Krtap28-10A0A1Y7VP58 119 aa2.63□□□□□ -1.99
Prpf40b-212ENSMUST00000145482 Krtap6-2O08884 159 aa2.58□□□□□ -2
Prpf40b-212ENSMUST00000145482 Gm7544A0A1Y7VJ58 118 aa2.44□□□□□ -2.02
Prpf40b-212ENSMUST00000145482 A030003K21RikA0A1Y7VIM3 128 aa2.24□□□□□ -2.05
Prpf40b-212ENSMUST00000145482 Gm6217A0A1Y7VJK9 128 aa2.04□□□□□ -2.08
Prpf40b-212ENSMUST00000145482 Krtap5-1Q64507 230 aa2.02□□□□□ -2.09
Prpf40b-212ENSMUST00000145482 Gm4559A4IF42 199 aa1.66□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 355 ms