RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Camk2n1Q6QWF9 78 aa3.39□□□□□ -1.87
Prpf39-201ENSMUST00000120580 A030003K21RikA0A1Y7VIM3 128 aa3.37□□□□□ -1.87
Prpf39-201ENSMUST00000120580 Krtap4-13Q9D7P3 165 aa3.37□□□□□ -1.87
Prpf39-201ENSMUST00000120580 Syne1Q6ZWR6 8799 aa3.34□□□□□ -1.88
Prpf39-201ENSMUST00000120580 Lce1cQ9D1C5 147 aa3.3□□□□□ -1.88
Prpf39-201ENSMUST00000120580 Krtap5-2Q9D5Z7 189 aa3.29□□□□□ -1.88
Prpf39-201ENSMUST00000120580 Gm11938Q9D3H4 131 aa3.29□□□□□ -1.88
Prpf39-201ENSMUST00000120580 2300003K06RikA2A4M0 262 aa3.29□□□□□ -1.88
Prpf39-201ENSMUST00000120580 Gm38119A0A0A6YX29 146 aa3.27□□□□□ -1.89
Prpf39-201ENSMUST00000120580 Krtap6-3A0A087WQL6 57 aa3.24□□□□□ -1.89
Prpf39-201ENSMUST00000120580 Gm10272F7CZ33 110 aa3.22□□□□□ -1.89
Prpf39-201ENSMUST00000120580 Gm11568A2A4M2 211 aa3.2□□□□□ -1.9
Prpf39-201ENSMUST00000120580 Krtap9-1Q64526 186 aa3.2□□□□□ -1.9
Prpf39-201ENSMUST00000120580 Sprr2dO70555 85 aa3.19□□□□□ -1.9
Prpf39-201ENSMUST00000120580 Lce1fB9EJP6 147 aa3.18□□□□□ -1.9
Prpf39-201ENSMUST00000120580 Lce1a1Q9CQH5 143 aa3.18□□□□□ -1.9
Prpf39-201ENSMUST00000120580 Gm6217A0A1Y7VJK9 128 aa3.18□□□□□ -1.9
Prpf39-201ENSMUST00000120580 Sprr2gO70558 76 aa3.16□□□□□ -1.9
Prpf39-201ENSMUST00000120580 Gm10153A0A1B0GRL1 320 aa3.14□□□□□ -1.91
Prpf39-201ENSMUST00000120580 Lce1lQ9D1G7 135 aa3.13□□□□□ -1.91
Prpf39-201ENSMUST00000120580 Tnp1P10856 55 aa3.09□□□□□ -1.91
Prpf39-201ENSMUST00000120580 Krtap20-2E9Q0A8 60 aa3.08□□□□□ -1.92
Prpf39-201ENSMUST00000120580 Gm45337A0A1B0GS71 263 aa3.07□□□□□ -1.92
Prpf39-201ENSMUST00000120580 Gm4553A0A1B0GSA9 284 aa3.05□□□□□ -1.92
Prpf39-201ENSMUST00000120580 Lce1kJ3QP15 125 aa3.03□□□□□ -1.92
Prpf39-201ENSMUST00000120580 Mt1P02802 61 aaKnown RBP3.02□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Gm9112A2AI92 75 aa2.99□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Gm2431E9Q8S1 172 aa2.98□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Gm11559Q9D3H7 191 aa2.97□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Gm40460A0A1B0GR10 244 aa2.97□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Gm7579A0A1B0GRJ4 243 aa2.97□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Krtap5-5Q2TA51 241 aa2.97□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Krtap5-4Q62220 223 aa2.97□□□□□ -1.93
Prpf39-201ENSMUST00000120580 Krtap31-2Q8CAY5 177 aa2.96□□□□□ -1.94
Prpf39-201ENSMUST00000120580 Lce3bQ9CQM7 98 aa2.95□□□□□ -1.94
Prpf39-201ENSMUST00000120580 Sprr2kO70562 68 aa2.9□□□□□ -1.95
Prpf39-201ENSMUST00000120580 Krtap19-4Q925H7 84 aa2.9□□□□□ -1.95
Prpf39-201ENSMUST00000120580 Sprr2iO70560 76 aa2.85□□□□□ -1.95
Prpf39-201ENSMUST00000120580 Hmcn1D3YXG0 5634 aa2.84□□□□□ -1.96
Prpf39-201ENSMUST00000120580 ObscnA2AAJ9 8891 aaKnown RBP2.84□□□□□ -1.96
Prpf39-201ENSMUST00000120580 Gm39115A0A1B0GSH7 232 aa2.81□□□□□ -1.96
Prpf39-201ENSMUST00000120580 A0A286YCP9 139 aa2.8□□□□□ -1.96
Prpf39-201ENSMUST00000120580 Sprr2hO70559 108 aa2.79□□□□□ -1.96
Prpf39-201ENSMUST00000120580 Kmt2dQ6PDK2 5588 aa2.77□□□□□ -1.97
Prpf39-201ENSMUST00000120580 Lce3dE9Q8V1 98 aa2.68□□□□□ -1.98
Prpf39-201ENSMUST00000120580 Lce3cQ91V05 98 aa2.68□□□□□ -1.98
Prpf39-201ENSMUST00000120580 Krtap31-1Q9D644 177 aa2.68□□□□□ -1.98
Prpf39-201ENSMUST00000120580 Macf1Q9QXZ0 7354 aaKnown RBP2.67□□□□□ -1.98
Prpf39-201ENSMUST00000120580 Sprr2eO70556 76 aa2.65□□□□□ -1.98
Prpf39-201ENSMUST00000120580 Gm11554B1AQB2 190 aa2.65□□□□□ -1.99
Prpf39-201ENSMUST00000120580 Lce3eF8VQJ0 98 aa2.64□□□□□ -1.99
Prpf39-201ENSMUST00000120580 Lce3fQ6PAI4 98 aa2.64□□□□□ -1.99
Prpf39-201ENSMUST00000120580 Eppk1Q8R0W0 6548 aa2.63□□□□□ -1.99
Prpf39-201ENSMUST00000120580 Gm10100J3QK64 120 aa2.56□□□□□ -2
Prpf39-201ENSMUST00000120580 Muc19Q6PZE0 7524 aa2.55□□□□□ -2
Prpf39-201ENSMUST00000120580 Mt3P28184 68 aa2.55□□□□□ -2
Prpf39-201ENSMUST00000120580 Lce3aQ497I5 98 aa2.52□□□□□ -2.01
Prpf39-201ENSMUST00000120580 Gm45618A0A1B0GSA0 219 aa2.51□□□□□ -2.01
Prpf39-201ENSMUST00000120580 Gm10142J3KMP7 120 aa2.51□□□□□ -2.01
Prpf39-201ENSMUST00000120580 Gm11639A0A1D5RLM8 5808 aa2.48□□□□□ -2.01
Prpf39-201ENSMUST00000120580 Sprr2fO70557 76 aa2.46□□□□□ -2.02
Prpf39-201ENSMUST00000120580 Krtap4-16Q91W93 202 aa2.45□□□□□ -2.02
Prpf39-201ENSMUST00000120580 4933428G20RikQ9D3X4 101 aa2.37□□□□□ -2.03
Prpf39-201ENSMUST00000120580 AhnakE9Q616 5656 aaKnown RBP2.37□□□□□ -2.03
Prpf39-201ENSMUST00000120580 Gm10024A0A0A0MQA4 119 aa2.3□□□□□ -2.04
Prpf39-201ENSMUST00000120580 DstQ91ZU6 7393 aaKnown RBP2.29□□□□□ -2.04
Prpf39-201ENSMUST00000120580 Gm11567Q9D141 195 aa2.23□□□□□ -2.05
Prpf39-201ENSMUST00000120580 Gm29735A0A1B0GT06 219 aa2.22□□□□□ -2.05
Prpf39-201ENSMUST00000120580 1110025L11RikO09048 78 aa2.17□□□□□ -2.06
Prpf39-201ENSMUST00000120580 Krtap6-5Q925H3 78 aa2.17□□□□□ -2.06
Prpf39-201ENSMUST00000120580 NebE9Q1W3 7152 aa2.11□□□□□ -2.07
Prpf39-201ENSMUST00000120580 Gpr98Q8VHN7 6298 aaKnown RBP2.05□□□□□ -2.08
Prpf39-201ENSMUST00000120580 Muc16A0A140LJ72 8478 aa1.92□□□□□ -2.1
Prpf39-201ENSMUST00000120580 Gm10229O08631 77 aa1.9□□□□□ -2.11
Prpf39-201ENSMUST00000120580 Krtap21-1Q925H4 128 aa1.85□□□□□ -2.11
Prpf39-201ENSMUST00000120580 Sprr2bO70554 98 aa1.69□□□□□ -2.14
Prpf39-201ENSMUST00000120580 Krtap6-2O08884 159 aa1.66□□□□□ -2.14
Prpf39-201ENSMUST00000120580 Phgr1Q8K0G7 91 aa1.63□□□□□ -2.15
Prpf39-201ENSMUST00000120580 Krtap5-1Q64507 230 aa1.43□□□□□ -2.18
Prpf39-201ENSMUST00000120580 Gm4559A4IF42 199 aa1.31□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 73.5 ms