RNA–Protein interactions for RNA: ENSMUST00000114989.8

Cnot4-202, Transcript of CCR4-NOT transcription complex subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cnot4, Length 3,279 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot4-202ENSMUST00000114989 Sprr2a3Q4KL71 83 aa2.48□□□□□ -2.01
Cnot4-202ENSMUST00000114989 Sprr2a1Q9CQK8 83 aa2.48□□□□□ -2.01
Cnot4-202ENSMUST00000114989 Hmcn1D3YXG0 5634 aa2.44□□□□□ -2.02
Cnot4-202ENSMUST00000114989 Syne2Q6ZWQ0 6874 aaKnown RBP2.42□□□□□ -2.02
Cnot4-202ENSMUST00000114989 Gm11596B1AQB0 205 aa2.41□□□□□ -2.02
Cnot4-202ENSMUST00000114989 Krtap4-13Q9D7P3 165 aa2.35□□□□□ -2.03
Cnot4-202ENSMUST00000114989 Gm11564A2A4L9 201 aa2.35□□□□□ -2.03
Cnot4-202ENSMUST00000114989 Krtap6-3A0A087WQL6 57 aa2.34□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Krtap9-5A2A5X3 358 aa2.34□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Gm10153A0A1B0GRL1 320 aa2.33□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Krtap12-1Q9Z287 130 aa2.32□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Gm45337A0A1B0GS71 263 aa2.31□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Krtap19-9aF8WH65 55 aa2.3□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Krtap5-4Q62220 223 aa2.3□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Gm11639A0A1D5RLM8 5808 aa2.29□□□□□ -2.04
Cnot4-202ENSMUST00000114989 2300003K06RikA2A4M0 262 aa2.28□□□□□ -2.04
Cnot4-202ENSMUST00000114989 Tnp1P10856 55 aa2.27□□□□□ -2.05
Cnot4-202ENSMUST00000114989 Krtap19-2Q925I0 141 aa2.27□□□□□ -2.05
Cnot4-202ENSMUST00000114989 Gm10142J3KMP7 120 aa2.23□□□□□ -2.05
Cnot4-202ENSMUST00000114989 Krtap20-2E9Q0A8 60 aa2.22□□□□□ -2.05
Cnot4-202ENSMUST00000114989 2310046K23RikA0A0A6YVW6 87 aa2.21□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Krtap4-8B1AQA8 209 aa2.21□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Krtap9-3Q3V2C1 136 aa2.2□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Lce1iQ9D6P5 149 aa2.2□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Krtap4-6Q3V4B7 195 aa2.2□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Lce1a2Q9D1K4 149 aa2.19□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Gm6358A0A087WPH4 74 aa2.18□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Krtap8-1O08633 61 aa2.18□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Krtap5-2Q9D5Z7 189 aa2.17□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Krtap19-9bQ99NG9 58 aa2.16□□□□□ -2.06
Cnot4-202ENSMUST00000114989 Gm4553A0A1B0GSA9 284 aa2.09□□□□□ -2.07
Cnot4-202ENSMUST00000114989 Gm10272F7CZ33 110 aa2.08□□□□□ -2.08
Cnot4-202ENSMUST00000114989 Gm40460A0A1B0GR10 244 aa2.07□□□□□ -2.08
Cnot4-202ENSMUST00000114989 Gm7579A0A1B0GRJ4 243 aa2.07□□□□□ -2.08
Cnot4-202ENSMUST00000114989 Krtap5-5Q2TA51 241 aa2.07□□□□□ -2.08
Cnot4-202ENSMUST00000114989 Mt2P02798 61 aa2.06□□□□□ -2.08
Cnot4-202ENSMUST00000114989 Mt3P28184 68 aa2.04□□□□□ -2.08
Cnot4-202ENSMUST00000114989 Krtap5-1Q64507 230 aa2.03□□□□□ -2.08
Cnot4-202ENSMUST00000114989 Mdn1A2ANY6 5589 aaKnown RBP2.02□□□□□ -2.09
Cnot4-202ENSMUST00000114989 4933428G20RikQ9D3X4 101 aa1.98□□□□□ -2.09
Cnot4-202ENSMUST00000114989 Fsip2A2ARZ3 6995 aa1.98□□□□□ -2.09
Cnot4-202ENSMUST00000114989 Muc16A0A140LJ72 8478 aa1.97□□□□□ -2.09
Cnot4-202ENSMUST00000114989 Krtap9-1Q64526 186 aa1.95□□□□□ -2.1
Cnot4-202ENSMUST00000114989 Syne1Q6ZWR6 8799 aa1.94□□□□□ -2.1
Cnot4-202ENSMUST00000114989 Sprr2gO70558 76 aa1.94□□□□□ -2.1
Cnot4-202ENSMUST00000114989 Krtap22-2J3QNX6 67 aa1.93□□□□□ -2.1
Cnot4-202ENSMUST00000114989 Gm4559A4IF42 199 aa1.92□□□□□ -2.1
Cnot4-202ENSMUST00000114989 Gm11938Q9D3H4 131 aa1.92□□□□□ -2.1
Cnot4-202ENSMUST00000114989 Mt4P47945 62 aa1.9□□□□□ -2.1
Cnot4-202ENSMUST00000114989 Sprr2iO70560 76 aa1.9□□□□□ -2.11
Cnot4-202ENSMUST00000114989 Gm11568A2A4M2 211 aa1.89□□□□□ -2.11
Cnot4-202ENSMUST00000114989 Sprr2dO70555 85 aa1.88□□□□□ -2.11
Cnot4-202ENSMUST00000114989 Kmt2dQ6PDK2 5588 aa1.86□□□□□ -2.11
Cnot4-202ENSMUST00000114989 DstQ91ZU6 7393 aaKnown RBP1.81□□□□□ -2.12
Cnot4-202ENSMUST00000114989 Sprr2fO70557 76 aa1.78□□□□□ -2.12
Cnot4-202ENSMUST00000114989 AhnakE9Q616 5656 aaKnown RBP1.78□□□□□ -2.12
Cnot4-202ENSMUST00000114989 Lce3bQ9CQM7 98 aa1.76□□□□□ -2.13
Cnot4-202ENSMUST00000114989 Krtap19-4Q925H7 84 aa1.72□□□□□ -2.13
Cnot4-202ENSMUST00000114989 Sprr2eO70556 76 aa1.72□□□□□ -2.13
Cnot4-202ENSMUST00000114989 Sprr2kO70562 68 aa1.71□□□□□ -2.14
Cnot4-202ENSMUST00000114989 Macf1Q9QXZ0 7354 aaKnown RBP1.71□□□□□ -2.14
Cnot4-202ENSMUST00000114989 Lce3cQ91V05 98 aa1.68□□□□□ -2.14
Cnot4-202ENSMUST00000114989 Krtap4-16Q91W93 202 aa1.68□□□□□ -2.14
Cnot4-202ENSMUST00000114989 Lce3dE9Q8V1 98 aa1.66□□□□□ -2.14
Cnot4-202ENSMUST00000114989 Lce3eF8VQJ0 98 aa1.66□□□□□ -2.14
Cnot4-202ENSMUST00000114989 Lce3fQ6PAI4 98 aa1.66□□□□□ -2.14
Cnot4-202ENSMUST00000114989 Sprr2hO70559 108 aa1.65□□□□□ -2.15
Cnot4-202ENSMUST00000114989 ObscnA2AAJ9 8891 aaKnown RBP1.62□□□□□ -2.15
Cnot4-202ENSMUST00000114989 Mt1P02802 61 aaKnown RBP1.61□□□□□ -2.15
Cnot4-202ENSMUST00000114989 Lce3aQ497I5 98 aa1.59□□□□□ -2.16
Cnot4-202ENSMUST00000114989 NebE9Q1W3 7152 aa1.57□□□□□ -2.16
Cnot4-202ENSMUST00000114989 Gm10024A0A0A0MQA4 119 aa1.5□□□□□ -2.17
Cnot4-202ENSMUST00000114989 Muc19Q6PZE0 7524 aa1.48□□□□□ -2.17
Cnot4-202ENSMUST00000114989 Sprr2bO70554 98 aa1.22□□□□□ -2.21
Cnot4-202ENSMUST00000114989 Krtap6-5Q925H3 78 aa1.22□□□□□ -2.21
Cnot4-202ENSMUST00000114989 Gm10229O08631 77 aa1.2□□□□□ -2.22
Cnot4-202ENSMUST00000114989 1110025L11RikO09048 78 aa1.18□□□□□ -2.22
Cnot4-202ENSMUST00000114989 Krtap21-1Q925H4 128 aa0.97□□□□□ -2.25
Cnot4-202ENSMUST00000114989 Krtap6-2O08884 159 aa0.96□□□□□ -2.26
Cnot4-202ENSMUST00000114989 Phgr1Q8K0G7 91 aa0.96□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 115.5 ms