RNA–Protein interactions for RNA: ENSMUST00000113696.7

Tpm1-212, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-212ENSMUST00000113696 A030005K14RikA0A1Y7VNY1 122 aa7.11□□□□□ -1.27
Tpm1-212ENSMUST00000113696 Mp68P56379 58 aa7.08□□□□□ -1.28
Tpm1-212ENSMUST00000113696 Sprr2gO70558 76 aa6.99□□□□□ -1.29
Tpm1-212ENSMUST00000113696 Lce1dQ9D731 133 aa6.98□□□□□ -1.29
Tpm1-212ENSMUST00000113696 2310046K23RikA0A0A6YVW6 87 aa6.96□□□□□ -1.3
Tpm1-212ENSMUST00000113696 Lce3bQ9CQM7 98 aa6.93□□□□□ -1.3
Tpm1-212ENSMUST00000113696 A030005L19RikA0A1Y7VIU2 113 aa6.9□□□□□ -1.31
Tpm1-212ENSMUST00000113696 Sprr2iO70560 76 aa6.81□□□□□ -1.32
Tpm1-212ENSMUST00000113696 Syne1Q6ZWR6 8799 aa6.79□□□□□ -1.32
Tpm1-212ENSMUST00000113696 Lce1a1Q9CQH5 143 aa6.78□□□□□ -1.32
Tpm1-212ENSMUST00000113696 Krtap20-2E9Q0A8 60 aa6.76□□□□□ -1.33
Tpm1-212ENSMUST00000113696 Lce1kJ3QP15 125 aa6.76□□□□□ -1.33
Tpm1-212ENSMUST00000113696 Gm11938Q9D3H4 131 aa6.7□□□□□ -1.34
Tpm1-212ENSMUST00000113696 Krtap5-2Q9D5Z7 189 aa6.67□□□□□ -1.34
Tpm1-212ENSMUST00000113696 Gm7544A0A1Y7VJ58 118 aa6.55□□□□□ -1.36
Tpm1-212ENSMUST00000113696 Gm11568A2A4M2 211 aa6.51□□□□□ -1.37
Tpm1-212ENSMUST00000113696 Krtap9-1Q64526 186 aa6.51□□□□□ -1.37
Tpm1-212ENSMUST00000113696 Lce1fB9EJP6 147 aa6.5□□□□□ -1.37
Tpm1-212ENSMUST00000113696 Lce1cQ9D1C5 147 aa6.5□□□□□ -1.37
Tpm1-212ENSMUST00000113696 Lce1eQ9D139 143 aa6.49□□□□□ -1.37
Tpm1-212ENSMUST00000113696 A0A1Y7VJ07 166 aa6.47□□□□□ -1.37
Tpm1-212ENSMUST00000113696 Gm20538F6Z9R1 75 aa6.38□□□□□ -1.39
Tpm1-212ENSMUST00000113696 Gm11559Q9D3H7 191 aa6.37□□□□□ -1.39
Tpm1-212ENSMUST00000113696 Lce3cQ91V05 98 aa6.36□□□□□ -1.39
Tpm1-212ENSMUST00000113696 Mt1P02802 61 aaKnown RBP6.34□□□□□ -1.39
Tpm1-212ENSMUST00000113696 Sprr2dO70555 85 aa6.31□□□□□ -1.4
Tpm1-212ENSMUST00000113696 Gm4553A0A1B0GSA9 284 aa6.28□□□□□ -1.4
Tpm1-212ENSMUST00000113696 Lce3dE9Q8V1 98 aa6.27□□□□□ -1.41
Tpm1-212ENSMUST00000113696 Krtap19-4Q925H7 84 aa6.25□□□□□ -1.41
Tpm1-212ENSMUST00000113696 A030014E15RikA0A1Y7VJV2 120 aa6.24□□□□□ -1.41
Tpm1-212ENSMUST00000113696 Gm11554B1AQB2 190 aa6.18□□□□□ -1.42
Tpm1-212ENSMUST00000113696 Lce3eF8VQJ0 98 aa6.16□□□□□ -1.42
Tpm1-212ENSMUST00000113696 Lce3fQ6PAI4 98 aa6.16□□□□□ -1.42
Tpm1-212ENSMUST00000113696 Macf1Q9QXZ0 7354 aaKnown RBP6.11□□□□□ -1.43
Tpm1-212ENSMUST00000113696 Gm10153A0A1B0GRL1 320 aa6.1□□□□□ -1.43
Tpm1-212ENSMUST00000113696 Gm45337A0A1B0GS71 263 aa6.09□□□□□ -1.43
Tpm1-212ENSMUST00000113696 Gm2431E9Q8S1 172 aa6.07□□□□□ -1.44
Tpm1-212ENSMUST00000113696 4933428G20RikQ9D3X4 101 aa6□□□□□ -1.45
Tpm1-212ENSMUST00000113696 Kmt2dQ6PDK2 5588 aa5.97□□□□□ -1.45
Tpm1-212ENSMUST00000113696 ObscnA2AAJ9 8891 aaKnown RBP5.95□□□□□ -1.46
Tpm1-212ENSMUST00000113696 Eppk1Q8R0W0 6548 aa5.92□□□□□ -1.46
Tpm1-212ENSMUST00000113696 Lce3aQ497I5 98 aa5.91□□□□□ -1.46
Tpm1-212ENSMUST00000113696 Gm40460A0A1B0GR10 244 aa5.91□□□□□ -1.46
Tpm1-212ENSMUST00000113696 Gm7579A0A1B0GRJ4 243 aa5.91□□□□□ -1.46
Tpm1-212ENSMUST00000113696 Krtap5-5Q2TA51 241 aa5.91□□□□□ -1.46
Tpm1-212ENSMUST00000113696 Krtap5-4Q62220 223 aa5.91□□□□□ -1.46
Tpm1-212ENSMUST00000113696 A030003K21RikA0A1Y7VIM3 128 aa5.86□□□□□ -1.47
Tpm1-212ENSMUST00000113696 Gm10100J3QK64 120 aa5.83□□□□□ -1.48
Tpm1-212ENSMUST00000113696 Mt3P28184 68 aa5.82□□□□□ -1.48
Tpm1-212ENSMUST00000113696 Ndufaf8A2AMZ4 74 aa5.78□□□□□ -1.48
Tpm1-212ENSMUST00000113696 Hmcn1D3YXG0 5634 aa5.78□□□□□ -1.48
Tpm1-212ENSMUST00000113696 Gm39115A0A1B0GSH7 232 aa5.67□□□□□ -1.5
Tpm1-212ENSMUST00000113696 Gm10142J3KMP7 120 aa5.65□□□□□ -1.51
Tpm1-212ENSMUST00000113696 Gm6217A0A1Y7VJK9 128 aa5.56□□□□□ -1.52
Tpm1-212ENSMUST00000113696 Gm11639A0A1D5RLM8 5808 aa5.52□□□□□ -1.53
Tpm1-212ENSMUST00000113696 Sprr2hO70559 108 aa5.46□□□□□ -1.54
Tpm1-212ENSMUST00000113696 Muc19Q6PZE0 7524 aa5.45□□□□□ -1.54
Tpm1-212ENSMUST00000113696 DstQ91ZU6 7393 aaKnown RBP5.43□□□□□ -1.54
Tpm1-212ENSMUST00000113696 Sprr2fO70557 76 aa5.29□□□□□ -1.56
Tpm1-212ENSMUST00000113696 Sprr2eO70556 76 aa5.18□□□□□ -1.58
Tpm1-212ENSMUST00000113696 A0A286YCP9 139 aa5.16□□□□□ -1.58
Tpm1-212ENSMUST00000113696 Gm45618A0A1B0GSA0 219 aa5.14□□□□□ -1.59
Tpm1-212ENSMUST00000113696 Krtap4-16Q91W93 202 aa5.13□□□□□ -1.59
Tpm1-212ENSMUST00000113696 Gpr98Q8VHN7 6298 aaKnown RBP5.1□□□□□ -1.59
Tpm1-212ENSMUST00000113696 NebE9Q1W3 7152 aa5.06□□□□□ -1.6
Tpm1-212ENSMUST00000113696 AhnakE9Q616 5656 aaKnown RBP5.06□□□□□ -1.6
Tpm1-212ENSMUST00000113696 Gm10024A0A0A0MQA4 119 aa5.05□□□□□ -1.6
Tpm1-212ENSMUST00000113696 1110025L11RikO09048 78 aa4.68□□□□□ -1.66
Tpm1-212ENSMUST00000113696 Krtap6-5Q925H3 78 aa4.68□□□□□ -1.66
Tpm1-212ENSMUST00000113696 Gm9112A2AI92 75 aa4.65□□□□□ -1.67
Tpm1-212ENSMUST00000113696 Gm29735A0A1B0GT06 219 aa4.4□□□□□ -1.71
Tpm1-212ENSMUST00000113696 Muc16A0A140LJ72 8478 aa4.35□□□□□ -1.71
Tpm1-212ENSMUST00000113696 Gm11567Q9D141 195 aa4.22□□□□□ -1.73
Tpm1-212ENSMUST00000113696 Gm10229O08631 77 aa4.18□□□□□ -1.74
Tpm1-212ENSMUST00000113696 Sprr2bO70554 98 aa3.89□□□□□ -1.79
Tpm1-212ENSMUST00000113696 Krtap21-1Q925H4 128 aa3.79□□□□□ -1.8
Tpm1-212ENSMUST00000113696 Krtap6-2O08884 159 aa3.64□□□□□ -1.83
Tpm1-212ENSMUST00000113696 Phgr1Q8K0G7 91 aa3.27□□□□□ -1.89
Tpm1-212ENSMUST00000113696 Krtap5-1Q64507 230 aa3.09□□□□□ -1.91
Tpm1-212ENSMUST00000113696 Gm4559A4IF42 199 aa2.81□□□□□ -1.96
Retrieved 80 of 22,080 RNA–protein pairs in 78.6 ms