RNA–Protein interactions for RNA: ENSMUST00000112354.2

Scn9a-203, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 6,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-203ENSMUST00000112354 Lce1lQ9D1G7 135 aa2.24□□□□□ -2.05
Scn9a-203ENSMUST00000112354 Lce1dQ9D731 133 aa2.24□□□□□ -2.05
Scn9a-203ENSMUST00000112354 Krtap9-3Q3V2C1 136 aa2.23□□□□□ -2.05
Scn9a-203ENSMUST00000112354 SspoQ8CG65 4998 aa2.23□□□□□ -2.05
Scn9a-203ENSMUST00000112354 Lce1bQ9D149 137 aa2.21□□□□□ -2.06
Scn9a-203ENSMUST00000112354 Syne1Q6ZWR6 8799 aa2.21□□□□□ -2.06
Scn9a-203ENSMUST00000112354 A030014E15RikA0A1Y7VJV2 120 aa2.2□□□□□ -2.06
Scn9a-203ENSMUST00000112354 Lce1eQ9D139 143 aa2.18□□□□□ -2.06
Scn9a-203ENSMUST00000112354 Krtap4-2B1AQ85 167 aa2.14□□□□□ -2.07
Scn9a-203ENSMUST00000112354 Krtap31-1Q9D644 177 aa2.13□□□□□ -2.07
Scn9a-203ENSMUST00000112354 Muc5bE9Q5I3 4800 aa2.09□□□□□ -2.07
Scn9a-203ENSMUST00000112354 Krtap17-1A2A5X6 109 aa2.09□□□□□ -2.07
Scn9a-203ENSMUST00000112354 Mt4P47945 62 aa2.09□□□□□ -2.07
Scn9a-203ENSMUST00000112354 Krtap4-6Q3V4B7 195 aa2.07□□□□□ -2.08
Scn9a-203ENSMUST00000112354 Sprr2dO70555 85 aa2.05□□□□□ -2.08
Scn9a-203ENSMUST00000112354 Krtap31-2Q8CAY5 177 aa2.05□□□□□ -2.08
Scn9a-203ENSMUST00000112354 Lce1a2Q9D1K4 149 aa2.04□□□□□ -2.08
Scn9a-203ENSMUST00000112354 Krtap4-1Q3UUY3 169 aa2.03□□□□□ -2.08
Scn9a-203ENSMUST00000112354 Mdn1A2ANY6 5589 aaKnown RBP2.03□□□□□ -2.08
Scn9a-203ENSMUST00000112354 Sprr2hO70559 108 aa2.03□□□□□ -2.08
Scn9a-203ENSMUST00000112354 Gm11596B1AQB0 205 aa2.01□□□□□ -2.09
Scn9a-203ENSMUST00000112354 Gm11938Q9D3H4 131 aa2.01□□□□□ -2.09
Scn9a-203ENSMUST00000112354 Gm11562A0PK51 136 aa1.99□□□□□ -2.09
Scn9a-203ENSMUST00000112354 Gm11564A2A4L9 201 aa1.98□□□□□ -2.09
Scn9a-203ENSMUST00000112354 Gm11563B1AQ90 168 aa1.98□□□□□ -2.09
Scn9a-203ENSMUST00000112354 Gm11595B1AQA7 289 aa1.98□□□□□ -2.09
Scn9a-203ENSMUST00000112354 Krtap4-8B1AQA8 209 aa1.98□□□□□ -2.09
Scn9a-203ENSMUST00000112354 Krtap4-9B1AQA9 244 aa1.96□□□□□ -2.1
Scn9a-203ENSMUST00000112354 2300003K06RikA2A4M0 262 aa1.95□□□□□ -2.1
Scn9a-203ENSMUST00000112354 Krtap4-7Q9D732 168 aa1.95□□□□□ -2.1
Scn9a-203ENSMUST00000112354 Mt3P28184 68 aa1.93□□□□□ -2.1
Scn9a-203ENSMUST00000112354 Krtap6-3A0A087WQL6 57 aa1.89□□□□□ -2.11
Scn9a-203ENSMUST00000112354 Lce1kJ3QP15 125 aa1.89□□□□□ -2.11
Scn9a-203ENSMUST00000112354 Krtap4-13Q9D7P3 165 aa1.88□□□□□ -2.11
Scn9a-203ENSMUST00000112354 Lce1a1Q9CQH5 143 aa1.85□□□□□ -2.11
Scn9a-203ENSMUST00000112354 Mt1P02802 61 aaKnown RBP1.84□□□□□ -2.11
Scn9a-203ENSMUST00000112354 Sprr2bO70554 98 aa1.84□□□□□ -2.12
Scn9a-203ENSMUST00000112354 A0A286YCP9 139 aa1.82□□□□□ -2.12
Scn9a-203ENSMUST00000112354 Gm11555B1AQ89 175 aa1.82□□□□□ -2.12
Scn9a-203ENSMUST00000112354 ObscnA2AAJ9 8891 aaKnown RBP1.81□□□□□ -2.12
Scn9a-203ENSMUST00000112354 Eppk1Q8R0W0 6548 aa1.81□□□□□ -2.12
Scn9a-203ENSMUST00000112354 Muc16A0A140LJ72 8478 aa1.79□□□□□ -2.12
Scn9a-203ENSMUST00000112354 Syne2Q6ZWQ0 6874 aaKnown RBP1.79□□□□□ -2.12
Scn9a-203ENSMUST00000112354 Fsip2A2ARZ3 6995 aa1.78□□□□□ -2.12
Scn9a-203ENSMUST00000112354 Krtap4-16Q91W93 202 aa1.77□□□□□ -2.13
Scn9a-203ENSMUST00000112354 Gm11554B1AQB2 190 aa1.67□□□□□ -2.14
Scn9a-203ENSMUST00000112354 Krtap20-2E9Q0A8 60 aa1.67□□□□□ -2.14
Scn9a-203ENSMUST00000112354 Macf1Q9QXZ0 7354 aaKnown RBP1.59□□□□□ -2.15
Scn9a-203ENSMUST00000112354 Kmt2dQ6PDK2 5588 aa1.56□□□□□ -2.16
Scn9a-203ENSMUST00000112354 Krtap5-2Q9D5Z7 189 aa1.51□□□□□ -2.17
Scn9a-203ENSMUST00000112354 Gpr98Q8VHN7 6298 aaKnown RBP1.5□□□□□ -2.17
Scn9a-203ENSMUST00000112354 1110025L11RikO09048 78 aa1.46□□□□□ -2.18
Scn9a-203ENSMUST00000112354 Krtap6-5Q925H3 78 aa1.46□□□□□ -2.18
Scn9a-203ENSMUST00000112354 DstQ91ZU6 7393 aaKnown RBP1.46□□□□□ -2.18
Scn9a-203ENSMUST00000112354 NebE9Q1W3 7152 aa1.45□□□□□ -2.18
Scn9a-203ENSMUST00000112354 Gm11568A2A4M2 211 aa1.44□□□□□ -2.18
Scn9a-203ENSMUST00000112354 Krtap9-1Q64526 186 aa1.44□□□□□ -2.18
Scn9a-203ENSMUST00000112354 Gm11559Q9D3H7 191 aa1.42□□□□□ -2.18
Scn9a-203ENSMUST00000112354 Gm10153A0A1B0GRL1 320 aa1.41□□□□□ -2.18
Scn9a-203ENSMUST00000112354 Gm4553A0A1B0GSA9 284 aa1.4□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Gm11639A0A1D5RLM8 5808 aa1.4□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Gm45337A0A1B0GS71 263 aa1.38□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Gm10229O08631 77 aa1.37□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Gm40460A0A1B0GR10 244 aa1.37□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Gm7579A0A1B0GRJ4 243 aa1.37□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Krtap5-5Q2TA51 241 aa1.37□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Krtap5-4Q62220 223 aa1.37□□□□□ -2.19
Scn9a-203ENSMUST00000112354 Hmcn1D3YXG0 5634 aa1.31□□□□□ -2.2
Scn9a-203ENSMUST00000112354 Gm2431E9Q8S1 172 aa1.3□□□□□ -2.2
Scn9a-203ENSMUST00000112354 Gm11567Q9D141 195 aa1.28□□□□□ -2.21
Scn9a-203ENSMUST00000112354 Muc19Q6PZE0 7524 aa1.27□□□□□ -2.21
Scn9a-203ENSMUST00000112354 Gm39115A0A1B0GSH7 232 aa1.25□□□□□ -2.21
Scn9a-203ENSMUST00000112354 Phgr1Q8K0G7 91 aa1.23□□□□□ -2.21
Scn9a-203ENSMUST00000112354 AhnakE9Q616 5656 aaKnown RBP1.23□□□□□ -2.21
Scn9a-203ENSMUST00000112354 Gm45618A0A1B0GSA0 219 aa1.18□□□□□ -2.22
Scn9a-203ENSMUST00000112354 Krtap6-2O08884 159 aa1.11□□□□□ -2.23
Scn9a-203ENSMUST00000112354 Gm29735A0A1B0GT06 219 aa1.09□□□□□ -2.24
Scn9a-203ENSMUST00000112354 Krtap21-1Q925H4 128 aa1.04□□□□□ -2.24
Scn9a-203ENSMUST00000112354 Krtap5-1Q64507 230 aa0.88□□□□□ -2.27
Scn9a-203ENSMUST00000112354 Gm4559A4IF42 199 aa0.69□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 54.5 ms