RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Lce3dE9Q8V1 98 aa4.07□□□□□ -1.76
Bdnf-205ENSMUST00000111045 Gm11938Q9D3H4 131 aa4□□□□□ -1.77
Bdnf-205ENSMUST00000111045 Lce1hQ9D6R3 140 aa3.97□□□□□ -1.77
Bdnf-205ENSMUST00000111045 Krtap22-2J3QNX6 67 aa3.95□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Lce3aQ497I5 98 aa3.95□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Lce3eF8VQJ0 98 aa3.95□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Sprr2iO70560 76 aa3.95□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Lce3fQ6PAI4 98 aa3.95□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Sprr2fO70557 76 aa3.92□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Fsip2A2ARZ3 6995 aa3.91□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Gm11569B1AQB1 180 aa3.91□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Gm10024A0A0A0MQA4 119 aa3.91□□□□□ -1.78
Bdnf-205ENSMUST00000111045 Krtap4-16Q91W93 202 aa3.88□□□□□ -1.79
Bdnf-205ENSMUST00000111045 Muc5bE9Q5I3 4800 aa3.86□□□□□ -1.79
Bdnf-205ENSMUST00000111045 Lce1eQ9D139 143 aa3.83□□□□□ -1.8
Bdnf-205ENSMUST00000111045 Sprr2dO70555 85 aa3.8□□□□□ -1.8
Bdnf-205ENSMUST00000111045 ObscnA2AAJ9 8891 aaKnown RBP3.77□□□□□ -1.81
Bdnf-205ENSMUST00000111045 Sprr2kO70562 68 aa3.75□□□□□ -1.81
Bdnf-205ENSMUST00000111045 Krtap19-4Q925H7 84 aa3.7□□□□□ -1.82
Bdnf-205ENSMUST00000111045 Gm38119A0A0A6YX29 146 aa3.68□□□□□ -1.82
Bdnf-205ENSMUST00000111045 Lce1cQ9D1C5 147 aa3.67□□□□□ -1.82
Bdnf-205ENSMUST00000111045 Krtap4-6Q3V4B7 195 aa3.67□□□□□ -1.82
Bdnf-205ENSMUST00000111045 Syne2Q6ZWQ0 6874 aaKnown RBP3.65□□□□□ -1.82
Bdnf-205ENSMUST00000111045 2300003K06RikA2A4M0 262 aa3.62□□□□□ -1.83
Bdnf-205ENSMUST00000111045 Sprr2hO70559 108 aa3.61□□□□□ -1.83
Bdnf-205ENSMUST00000111045 Macf1Q9QXZ0 7354 aaKnown RBP3.61□□□□□ -1.83
Bdnf-205ENSMUST00000111045 Lce1gQ9D195 139 aa3.6□□□□□ -1.83
Bdnf-205ENSMUST00000111045 Sprr2eO70556 76 aa3.56□□□□□ -1.84
Bdnf-205ENSMUST00000111045 Lce1fB9EJP6 147 aa3.55□□□□□ -1.84
Bdnf-205ENSMUST00000111045 Lce1a1Q9CQH5 143 aa3.55□□□□□ -1.84
Bdnf-205ENSMUST00000111045 Mt4P47945 62 aa3.54□□□□□ -1.84
Bdnf-205ENSMUST00000111045 Gm11562A0PK51 136 aa3.5□□□□□ -1.85
Bdnf-205ENSMUST00000111045 Gm11596B1AQB0 205 aa3.49□□□□□ -1.85
Bdnf-205ENSMUST00000111045 Gm11564A2A4L9 201 aa3.42□□□□□ -1.86
Bdnf-205ENSMUST00000111045 Gm11595B1AQA7 289 aa3.42□□□□□ -1.86
Bdnf-205ENSMUST00000111045 Krtap4-8B1AQA8 209 aa3.42□□□□□ -1.86
Bdnf-205ENSMUST00000111045 Krtap4-9B1AQA9 244 aa3.41□□□□□ -1.86
Bdnf-205ENSMUST00000111045 Lce1bQ9D149 137 aa3.41□□□□□ -1.86
Bdnf-205ENSMUST00000111045 Lce1lQ9D1G7 135 aa3.38□□□□□ -1.87
Bdnf-205ENSMUST00000111045 Krtap4-13Q9D7P3 165 aa3.34□□□□□ -1.87
Bdnf-205ENSMUST00000111045 Lce1kJ3QP15 125 aa3.23□□□□□ -1.89
Bdnf-205ENSMUST00000111045 DstQ91ZU6 7393 aaKnown RBP3.12□□□□□ -1.91
Bdnf-205ENSMUST00000111045 NebE9Q1W3 7152 aa3.05□□□□□ -1.92
Bdnf-205ENSMUST00000111045 Muc19Q6PZE0 7524 aa3.05□□□□□ -1.92
Bdnf-205ENSMUST00000111045 Gm45618A0A1B0GSA0 219 aa3.01□□□□□ -1.93
Bdnf-205ENSMUST00000111045 Mt1P02802 61 aaKnown RBP3.01□□□□□ -1.93
Bdnf-205ENSMUST00000111045 Krtap20-2E9Q0A8 60 aa2.99□□□□□ -1.93
Bdnf-205ENSMUST00000111045 Gm11559Q9D3H7 191 aa2.91□□□□□ -1.94
Bdnf-205ENSMUST00000111045 Gm11554B1AQB2 190 aa2.9□□□□□ -1.94
Bdnf-205ENSMUST00000111045 Krtap6-3A0A087WQL6 57 aa2.88□□□□□ -1.95
Bdnf-205ENSMUST00000111045 Kmt2dQ6PDK2 5588 aa2.84□□□□□ -1.95
Bdnf-205ENSMUST00000111045 Mt3P28184 68 aa2.83□□□□□ -1.96
Bdnf-205ENSMUST00000111045 Gm11568A2A4M2 211 aa2.8□□□□□ -1.96
Bdnf-205ENSMUST00000111045 Krtap9-1Q64526 186 aa2.8□□□□□ -1.96
Bdnf-205ENSMUST00000111045 Hmcn1D3YXG0 5634 aa2.7□□□□□ -1.98
Bdnf-205ENSMUST00000111045 Gm39115A0A1B0GSH7 232 aa2.65□□□□□ -1.98
Bdnf-205ENSMUST00000111045 Gm11639A0A1D5RLM8 5808 aa2.62□□□□□ -1.99
Bdnf-205ENSMUST00000111045 Krtap5-2Q9D5Z7 189 aa2.57□□□□□ -2
Bdnf-205ENSMUST00000111045 Gpr98Q8VHN7 6298 aaKnown RBP2.51□□□□□ -2.01
Bdnf-205ENSMUST00000111045 Eppk1Q8R0W0 6548 aa2.5□□□□□ -2.01
Bdnf-205ENSMUST00000111045 Gm10153A0A1B0GRL1 320 aa2.49□□□□□ -2.01
Bdnf-205ENSMUST00000111045 Sprr2bO70554 98 aa2.44□□□□□ -2.02
Bdnf-205ENSMUST00000111045 Gm29735A0A1B0GT06 219 aa2.42□□□□□ -2.02
Bdnf-205ENSMUST00000111045 Phgr1Q8K0G7 91 aa2.38□□□□□ -2.03
Bdnf-205ENSMUST00000111045 Gm2431E9Q8S1 172 aa2.36□□□□□ -2.03
Bdnf-205ENSMUST00000111045 1110025L11RikO09048 78 aa2.36□□□□□ -2.03
Bdnf-205ENSMUST00000111045 Krtap6-5Q925H3 78 aa2.36□□□□□ -2.03
Bdnf-205ENSMUST00000111045 Gm4553A0A1B0GSA9 284 aa2.34□□□□□ -2.03
Bdnf-205ENSMUST00000111045 Gm45337A0A1B0GS71 263 aa2.28□□□□□ -2.04
Bdnf-205ENSMUST00000111045 Gm11567Q9D141 195 aa2.26□□□□□ -2.05
Bdnf-205ENSMUST00000111045 Krtap5-1Q64507 230 aa2.21□□□□□ -2.06
Bdnf-205ENSMUST00000111045 Gm40460A0A1B0GR10 244 aa2.18□□□□□ -2.06
Bdnf-205ENSMUST00000111045 Gm7579A0A1B0GRJ4 243 aa2.18□□□□□ -2.06
Bdnf-205ENSMUST00000111045 Krtap5-5Q2TA51 241 aa2.18□□□□□ -2.06
Bdnf-205ENSMUST00000111045 Krtap5-4Q62220 223 aa2.18□□□□□ -2.06
Bdnf-205ENSMUST00000111045 AhnakE9Q616 5656 aaKnown RBP2.14□□□□□ -2.07
Bdnf-205ENSMUST00000111045 Gm10229O08631 77 aa2.13□□□□□ -2.07
Bdnf-205ENSMUST00000111045 Gm4559A4IF42 199 aa2.08□□□□□ -2.08
Bdnf-205ENSMUST00000111045 Krtap21-1Q925H4 128 aa1.85□□□□□ -2.11
Bdnf-205ENSMUST00000111045 Krtap6-2O08884 159 aa1.78□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 131.9 ms