RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Gm11938Q9D3H4 131 aa2.65□□□□□ -1.98
Bdnf-204ENSMUST00000111044 Sprr2dO70555 85 aa2.63□□□□□ -1.99
Bdnf-204ENSMUST00000111044 Gm11596B1AQB0 205 aa2.6□□□□□ -1.99
Bdnf-204ENSMUST00000111044 Syne2Q6ZWQ0 6874 aaKnown RBP2.58□□□□□ -2
Bdnf-204ENSMUST00000111044 Gm6358A0A087WPH4 74 aa2.58□□□□□ -2
Bdnf-204ENSMUST00000111044 Mt2P02798 61 aa2.58□□□□□ -2
Bdnf-204ENSMUST00000111044 Gm11559Q9D3H7 191 aa2.57□□□□□ -2
Bdnf-204ENSMUST00000111044 Sprr2iO70560 76 aa2.56□□□□□ -2
Bdnf-204ENSMUST00000111044 Gm10272F7CZ33 110 aa2.56□□□□□ -2
Bdnf-204ENSMUST00000111044 Gm10100J3QK64 120 aa2.55□□□□□ -2
Bdnf-204ENSMUST00000111044 Muc5bE9Q5I3 4800 aa2.54□□□□□ -2
Bdnf-204ENSMUST00000111044 Krtap4-9B1AQA9 244 aa2.53□□□□□ -2
Bdnf-204ENSMUST00000111044 Lce1a1Q9CQH5 143 aa2.52□□□□□ -2.01
Bdnf-204ENSMUST00000111044 Gm10142J3KMP7 120 aa2.51□□□□□ -2.01
Bdnf-204ENSMUST00000111044 Mdn1A2ANY6 5589 aaKnown RBP2.5□□□□□ -2.01
Bdnf-204ENSMUST00000111044 Krtap4-6Q3V4B7 195 aa2.49□□□□□ -2.01
Bdnf-204ENSMUST00000111044 Sprr2kO70562 68 aa2.48□□□□□ -2.01
Bdnf-204ENSMUST00000111044 Lce3bQ9CQM7 98 aa2.46□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Krtap22-2J3QNX6 67 aa2.45□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Sprr2fO70557 76 aa2.45□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Krtap19-4Q925H7 84 aa2.45□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Lce1lQ9D1G7 135 aa2.44□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Gm11564A2A4L9 201 aa2.42□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Gm11595B1AQA7 289 aa2.42□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Krtap4-8B1AQA8 209 aa2.42□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Lce3cQ91V05 98 aa2.41□□□□□ -2.02
Bdnf-204ENSMUST00000111044 Lce3dE9Q8V1 98 aa2.4□□□□□ -2.03
Bdnf-204ENSMUST00000111044 Lce1cQ9D1C5 147 aa2.4□□□□□ -2.03
Bdnf-204ENSMUST00000111044 Sprr2eO70556 76 aa2.38□□□□□ -2.03
Bdnf-204ENSMUST00000111044 Krtap6-3A0A087WQL6 57 aa2.37□□□□□ -2.03
Bdnf-204ENSMUST00000111044 Lce3eF8VQJ0 98 aa2.36□□□□□ -2.03
Bdnf-204ENSMUST00000111044 Lce3fQ6PAI4 98 aa2.36□□□□□ -2.03
Bdnf-204ENSMUST00000111044 Lce3aQ497I5 98 aa2.33□□□□□ -2.04
Bdnf-204ENSMUST00000111044 Lce1fB9EJP6 147 aa2.32□□□□□ -2.04
Bdnf-204ENSMUST00000111044 Sprr2hO70559 108 aa2.32□□□□□ -2.04
Bdnf-204ENSMUST00000111044 Eppk1Q8R0W0 6548 aa2.31□□□□□ -2.04
Bdnf-204ENSMUST00000111044 Krtap5-1Q64507 230 aa2.31□□□□□ -2.04
Bdnf-204ENSMUST00000111044 Mt4P47945 62 aa2.3□□□□□ -2.04
Bdnf-204ENSMUST00000111044 Gm11554B1AQB2 190 aa2.26□□□□□ -2.05
Bdnf-204ENSMUST00000111044 Krtap4-13Q9D7P3 165 aa2.26□□□□□ -2.05
Bdnf-204ENSMUST00000111044 Gm29735A0A1B0GT06 219 aa2.25□□□□□ -2.05
Bdnf-204ENSMUST00000111044 Krtap4-16Q91W93 202 aa2.21□□□□□ -2.06
Bdnf-204ENSMUST00000111044 Syne1Q6ZWR6 8799 aa2.21□□□□□ -2.06
Bdnf-204ENSMUST00000111044 Fsip2A2ARZ3 6995 aa2.2□□□□□ -2.06
Bdnf-204ENSMUST00000111044 2300003K06RikA2A4M0 262 aa2.19□□□□□ -2.06
Bdnf-204ENSMUST00000111044 Gm2431E9Q8S1 172 aa2.19□□□□□ -2.06
Bdnf-204ENSMUST00000111044 Gm45337A0A1B0GS71 263 aa2.15□□□□□ -2.07
Bdnf-204ENSMUST00000111044 Krtap20-2E9Q0A8 60 aa2.15□□□□□ -2.07
Bdnf-204ENSMUST00000111044 Gm4559A4IF42 199 aa2.14□□□□□ -2.07
Bdnf-204ENSMUST00000111044 Gm10024A0A0A0MQA4 119 aa2.06□□□□□ -2.08
Bdnf-204ENSMUST00000111044 ObscnA2AAJ9 8891 aaKnown RBP2.04□□□□□ -2.08
Bdnf-204ENSMUST00000111044 Gpr98Q8VHN7 6298 aaKnown RBP2.01□□□□□ -2.09
Bdnf-204ENSMUST00000111044 Krtap5-5Q2TA51 241 aa1.99□□□□□ -2.09
Bdnf-204ENSMUST00000111044 Lce1kJ3QP15 125 aa1.99□□□□□ -2.09
Bdnf-204ENSMUST00000111044 Gm11639A0A1D5RLM8 5808 aa1.95□□□□□ -2.1
Bdnf-204ENSMUST00000111044 Muc16A0A140LJ72 8478 aa1.93□□□□□ -2.1
Bdnf-204ENSMUST00000111044 Mt1P02802 61 aaKnown RBP1.92□□□□□ -2.1
Bdnf-204ENSMUST00000111044 Gm11567Q9D141 195 aa1.92□□□□□ -2.1
Bdnf-204ENSMUST00000111044 Mt3P28184 68 aa1.91□□□□□ -2.1
Bdnf-204ENSMUST00000111044 Gm40460A0A1B0GR10 244 aa1.9□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Gm4553A0A1B0GSA9 284 aa1.9□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Krtap5-4Q62220 223 aa1.89□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Gm10153A0A1B0GRL1 320 aa1.87□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Macf1Q9QXZ0 7354 aaKnown RBP1.86□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Gm11568A2A4M2 211 aa1.85□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Krtap9-1Q64526 186 aa1.85□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Kmt2dQ6PDK2 5588 aa1.85□□□□□ -2.11
Bdnf-204ENSMUST00000111044 Krtap5-2Q9D5Z7 189 aa1.77□□□□□ -2.13
Bdnf-204ENSMUST00000111044 DstQ91ZU6 7393 aaKnown RBP1.76□□□□□ -2.13
Bdnf-204ENSMUST00000111044 NebE9Q1W3 7152 aa1.71□□□□□ -2.14
Bdnf-204ENSMUST00000111044 Sprr2bO70554 98 aa1.62□□□□□ -2.15
Bdnf-204ENSMUST00000111044 Muc19Q6PZE0 7524 aa1.62□□□□□ -2.15
Bdnf-204ENSMUST00000111044 Gm7579A0A1B0GRJ4 243 aa1.54□□□□□ -2.16
Bdnf-204ENSMUST00000111044 1110025L11RikO09048 78 aa1.52□□□□□ -2.17
Bdnf-204ENSMUST00000111044 Krtap6-5Q925H3 78 aa1.52□□□□□ -2.17
Bdnf-204ENSMUST00000111044 AhnakE9Q616 5656 aaKnown RBP1.51□□□□□ -2.17
Bdnf-204ENSMUST00000111044 Phgr1Q8K0G7 91 aa1.4□□□□□ -2.18
Bdnf-204ENSMUST00000111044 Gm10229O08631 77 aa1.35□□□□□ -2.19
Bdnf-204ENSMUST00000111044 Krtap21-1Q925H4 128 aa1.23□□□□□ -2.21
Bdnf-204ENSMUST00000111044 Krtap6-2O08884 159 aa1.11□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 104.6 ms