RNA–Protein interactions for RNA: ENSMUST00000110808.1

Ino80-202, Transcript of DNA helicase INO80, mousemouse

TSL 1 (best) BASIC

Gene Ino80, Length 3,928 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80-202ENSMUST00000110808 Lce3aQ497I5 98 aa4.5□□□□□ -1.69
Ino80-202ENSMUST00000110808 Lce1fB9EJP6 147 aa4.48□□□□□ -1.69
Ino80-202ENSMUST00000110808 Krtap19-4Q925H7 84 aa4.48□□□□□ -1.69
Ino80-202ENSMUST00000110808 Lce1cQ9D1C5 147 aa4.48□□□□□ -1.69
Ino80-202ENSMUST00000110808 Lce1lQ9D1G7 135 aa4.48□□□□□ -1.69
Ino80-202ENSMUST00000110808 Sprr2dO70555 85 aa4.47□□□□□ -1.69
Ino80-202ENSMUST00000110808 Gm11564A2A4L9 201 aa4.47□□□□□ -1.69
Ino80-202ENSMUST00000110808 Gm11563B1AQ90 168 aa4.47□□□□□ -1.69
Ino80-202ENSMUST00000110808 Gm11595B1AQA7 289 aa4.47□□□□□ -1.69
Ino80-202ENSMUST00000110808 Krtap4-8B1AQA8 209 aa4.47□□□□□ -1.69
Ino80-202ENSMUST00000110808 Krtap4-9B1AQA9 244 aa4.47□□□□□ -1.69
Ino80-202ENSMUST00000110808 Gm11596B1AQB0 205 aa4.47□□□□□ -1.69
Ino80-202ENSMUST00000110808 Lce1eQ9D139 143 aa4.46□□□□□ -1.7
Ino80-202ENSMUST00000110808 Sprr2iO70560 76 aa4.44□□□□□ -1.7
Ino80-202ENSMUST00000110808 Gm11562A0PK51 136 aa4.4□□□□□ -1.71
Ino80-202ENSMUST00000110808 A0A1Y7VLE6 161 aa4.37□□□□□ -1.71
Ino80-202ENSMUST00000110808 Krtap4-13Q9D7P3 165 aa4.35□□□□□ -1.71
Ino80-202ENSMUST00000110808 2300003K06RikA2A4M0 262 aa4.35□□□□□ -1.71
Ino80-202ENSMUST00000110808 Krtap28-10A0A1Y7VP58 119 aa4.31□□□□□ -1.72
Ino80-202ENSMUST00000110808 ObscnA2AAJ9 8891 aaKnown RBP4.29□□□□□ -1.72
Ino80-202ENSMUST00000110808 Gm7544A0A1Y7VJ58 118 aa4.29□□□□□ -1.72
Ino80-202ENSMUST00000110808 Macf1Q9QXZ0 7354 aaKnown RBP4.28□□□□□ -1.72
Ino80-202ENSMUST00000110808 Lce1a1Q9CQH5 143 aa4.26□□□□□ -1.73
Ino80-202ENSMUST00000110808 Krtap4-7Q9D732 168 aa4.24□□□□□ -1.73
Ino80-202ENSMUST00000110808 Lce1kJ3QP15 125 aa4.23□□□□□ -1.73
Ino80-202ENSMUST00000110808 Sprr2fO70557 76 aa4.15□□□□□ -1.74
Ino80-202ENSMUST00000110808 Krtap31-1Q9D644 177 aa4.13□□□□□ -1.75
Ino80-202ENSMUST00000110808 A030005L19RikA0A1Y7VIU2 113 aa4.12□□□□□ -1.75
Ino80-202ENSMUST00000110808 Gm11555B1AQ89 175 aa4.08□□□□□ -1.76
Ino80-202ENSMUST00000110808 Gm10024A0A0A0MQA4 119 aa4.07□□□□□ -1.76
Ino80-202ENSMUST00000110808 Sprr2hO70559 108 aa4.05□□□□□ -1.76
Ino80-202ENSMUST00000110808 A030005K14RikA0A1Y7VNY1 122 aa4□□□□□ -1.77
Ino80-202ENSMUST00000110808 Sprr2eO70556 76 aa3.99□□□□□ -1.77
Ino80-202ENSMUST00000110808 Krtap4-16Q91W93 202 aa3.97□□□□□ -1.77
Ino80-202ENSMUST00000110808 Krtap28-13A0A087WQP5 138 aa3.93□□□□□ -1.78
Ino80-202ENSMUST00000110808 Krtap20-2E9Q0A8 60 aa3.9□□□□□ -1.78
Ino80-202ENSMUST00000110808 Mt1P02802 61 aaKnown RBP3.88□□□□□ -1.79
Ino80-202ENSMUST00000110808 Muc19Q6PZE0 7524 aa3.86□□□□□ -1.79
Ino80-202ENSMUST00000110808 A030003K21RikA0A1Y7VIM3 128 aa3.79□□□□□ -1.8
Ino80-202ENSMUST00000110808 A0A286YCP9 139 aa3.79□□□□□ -1.8
Ino80-202ENSMUST00000110808 Gm6217A0A1Y7VJK9 128 aa3.77□□□□□ -1.81
Ino80-202ENSMUST00000110808 Krtap6-3A0A087WQL6 57 aa3.74□□□□□ -1.81
Ino80-202ENSMUST00000110808 Gm11554B1AQB2 190 aa3.72□□□□□ -1.81
Ino80-202ENSMUST00000110808 Mt3P28184 68 aa3.72□□□□□ -1.81
Ino80-202ENSMUST00000110808 DstQ91ZU6 7393 aaKnown RBP3.64□□□□□ -1.83
Ino80-202ENSMUST00000110808 NebE9Q1W3 7152 aa3.59□□□□□ -1.83
Ino80-202ENSMUST00000110808 Gm11568A2A4M2 211 aa3.53□□□□□ -1.84
Ino80-202ENSMUST00000110808 Krtap9-1Q64526 186 aa3.53□□□□□ -1.84
Ino80-202ENSMUST00000110808 Krtap31-2Q8CAY5 177 aa3.48□□□□□ -1.85
Ino80-202ENSMUST00000110808 Kmt2dQ6PDK2 5588 aa3.43□□□□□ -1.86
Ino80-202ENSMUST00000110808 Hmcn1D3YXG0 5634 aa3.38□□□□□ -1.87
Ino80-202ENSMUST00000110808 A0A1Y7VJ07 166 aa3.34□□□□□ -1.87
Ino80-202ENSMUST00000110808 Krtap5-2Q9D5Z7 189 aa3.24□□□□□ -1.89
Ino80-202ENSMUST00000110808 Gm11559Q9D3H7 191 aa3.21□□□□□ -1.9
Ino80-202ENSMUST00000110808 Gm11639A0A1D5RLM8 5808 aa3.09□□□□□ -1.91
Ino80-202ENSMUST00000110808 1110025L11RikO09048 78 aa3.07□□□□□ -1.92
Ino80-202ENSMUST00000110808 Krtap6-5Q925H3 78 aa3.07□□□□□ -1.92
Ino80-202ENSMUST00000110808 A030014E15RikA0A1Y7VJV2 120 aa3.02□□□□□ -1.93
Ino80-202ENSMUST00000110808 Gm10153A0A1B0GRL1 320 aa3.01□□□□□ -1.93
Ino80-202ENSMUST00000110808 Gpr98Q8VHN7 6298 aaKnown RBP3□□□□□ -1.93
Ino80-202ENSMUST00000110808 Gm4553A0A1B0GSA9 284 aa2.98□□□□□ -1.93
Ino80-202ENSMUST00000110808 Eppk1Q8R0W0 6548 aa2.93□□□□□ -1.94
Ino80-202ENSMUST00000110808 Gm2431E9Q8S1 172 aa2.92□□□□□ -1.94
Ino80-202ENSMUST00000110808 Sprr2bO70554 98 aa2.88□□□□□ -1.95
Ino80-202ENSMUST00000110808 Gm45337A0A1B0GS71 263 aa2.8□□□□□ -1.96
Ino80-202ENSMUST00000110808 Gm10229O08631 77 aa2.78□□□□□ -1.96
Ino80-202ENSMUST00000110808 AhnakE9Q616 5656 aaKnown RBP2.77□□□□□ -1.97
Ino80-202ENSMUST00000110808 Gm40460A0A1B0GR10 244 aa2.71□□□□□ -1.98
Ino80-202ENSMUST00000110808 Gm7579A0A1B0GRJ4 243 aa2.71□□□□□ -1.98
Ino80-202ENSMUST00000110808 Krtap5-5Q2TA51 241 aa2.71□□□□□ -1.98
Ino80-202ENSMUST00000110808 Krtap5-4Q62220 223 aa2.71□□□□□ -1.98
Ino80-202ENSMUST00000110808 Phgr1Q8K0G7 91 aa2.56□□□□□ -2
Ino80-202ENSMUST00000110808 Gm39115A0A1B0GSH7 232 aa2.49□□□□□ -2.01
Ino80-202ENSMUST00000110808 Krtap21-1Q925H4 128 aa2.37□□□□□ -2.03
Ino80-202ENSMUST00000110808 Gm45618A0A1B0GSA0 219 aa2.37□□□□□ -2.03
Ino80-202ENSMUST00000110808 Gm11567Q9D141 195 aa2.36□□□□□ -2.03
Ino80-202ENSMUST00000110808 Krtap6-2O08884 159 aa2.33□□□□□ -2.04
Ino80-202ENSMUST00000110808 Gm29735A0A1B0GT06 219 aa2.02□□□□□ -2.09
Ino80-202ENSMUST00000110808 Krtap5-1Q64507 230 aa1.77□□□□□ -2.13
Ino80-202ENSMUST00000110808 Gm4559A4IF42 199 aa1.67□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 82.9 ms