RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Gm11562A0PK51 136 aa3.85□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Lce1fB9EJP6 147 aa3.84□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Lce1cQ9D1C5 147 aa3.84□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Lce1dQ9D731 133 aa3.84□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Lce3eF8VQJ0 98 aa3.82□□□□□ -1.8
Col20a1-201ENSMUST00000108856 Lce3fQ6PAI4 98 aa3.82□□□□□ -1.8
Col20a1-201ENSMUST00000108856 Muc16A0A140LJ72 8478 aa3.81□□□□□ -1.8
Col20a1-201ENSMUST00000108856 Lce1hQ9D6R3 140 aa3.81□□□□□ -1.8
Col20a1-201ENSMUST00000108856 Sprr2fO70557 76 aa3.8□□□□□ -1.8
Col20a1-201ENSMUST00000108856 Lce3dE9Q8V1 98 aa3.79□□□□□ -1.8
Col20a1-201ENSMUST00000108856 Krtap4-13Q9D7P3 165 aa3.77□□□□□ -1.81
Col20a1-201ENSMUST00000108856 2300003K06RikA2A4M0 262 aa3.75□□□□□ -1.81
Col20a1-201ENSMUST00000108856 Krtap4-7Q9D732 168 aa3.74□□□□□ -1.81
Col20a1-201ENSMUST00000108856 Krtap19-4Q925H7 84 aa3.69□□□□□ -1.82
Col20a1-201ENSMUST00000108856 Lce3aQ497I5 98 aa3.68□□□□□ -1.82
Col20a1-201ENSMUST00000108856 Macf1Q9QXZ0 7354 aaKnown RBP3.65□□□□□ -1.82
Col20a1-201ENSMUST00000108856 Lce1eQ9D139 143 aa3.65□□□□□ -1.82
Col20a1-201ENSMUST00000108856 Sprr2eO70556 76 aa3.62□□□□□ -1.83
Col20a1-201ENSMUST00000108856 Krtap6-3A0A087WQL6 57 aa3.56□□□□□ -1.84
Col20a1-201ENSMUST00000108856 Lce1a1Q9CQH5 143 aa3.53□□□□□ -1.84
Col20a1-201ENSMUST00000108856 Krtap31-1Q9D644 177 aa3.48□□□□□ -1.85
Col20a1-201ENSMUST00000108856 Sprr2dO70555 85 aa3.48□□□□□ -1.85
Col20a1-201ENSMUST00000108856 Lce1kJ3QP15 125 aa3.46□□□□□ -1.85
Col20a1-201ENSMUST00000108856 Gm11938Q9D3H4 131 aa3.44□□□□□ -1.86
Col20a1-201ENSMUST00000108856 Gm10024A0A0A0MQA4 119 aa3.43□□□□□ -1.86
Col20a1-201ENSMUST00000108856 DstQ91ZU6 7393 aaKnown RBP3.4□□□□□ -1.87
Col20a1-201ENSMUST00000108856 Eppk1Q8R0W0 6548 aa3.35□□□□□ -1.87
Col20a1-201ENSMUST00000108856 Gm11554B1AQB2 190 aa3.35□□□□□ -1.87
Col20a1-201ENSMUST00000108856 ObscnA2AAJ9 8891 aaKnown RBP3.32□□□□□ -1.88
Col20a1-201ENSMUST00000108856 Gm11555B1AQ89 175 aa3.32□□□□□ -1.88
Col20a1-201ENSMUST00000108856 NebE9Q1W3 7152 aa3.28□□□□□ -1.89
Col20a1-201ENSMUST00000108856 Krtap20-2E9Q0A8 60 aa3.24□□□□□ -1.89
Col20a1-201ENSMUST00000108856 Sprr2hO70559 108 aa3.22□□□□□ -1.89
Col20a1-201ENSMUST00000108856 Mt3P28184 68 aa3.17□□□□□ -1.9
Col20a1-201ENSMUST00000108856 Krtap4-16Q91W93 202 aa3.11□□□□□ -1.91
Col20a1-201ENSMUST00000108856 Krtap31-2Q8CAY5 177 aa3.1□□□□□ -1.91
Col20a1-201ENSMUST00000108856 Kmt2dQ6PDK2 5588 aa3.03□□□□□ -1.92
Col20a1-201ENSMUST00000108856 Mt1P02802 61 aaKnown RBP2.98□□□□□ -1.93
Col20a1-201ENSMUST00000108856 Gpr98Q8VHN7 6298 aaKnown RBP2.97□□□□□ -1.93
Col20a1-201ENSMUST00000108856 Muc19Q6PZE0 7524 aa2.95□□□□□ -1.94
Col20a1-201ENSMUST00000108856 Gm11639A0A1D5RLM8 5808 aa2.87□□□□□ -1.95
Col20a1-201ENSMUST00000108856 Sprr2bO70554 98 aa2.82□□□□□ -1.96
Col20a1-201ENSMUST00000108856 Gm11559Q9D3H7 191 aa2.72□□□□□ -1.97
Col20a1-201ENSMUST00000108856 Gm11568A2A4M2 211 aa2.71□□□□□ -1.98
Col20a1-201ENSMUST00000108856 Krtap9-1Q64526 186 aa2.71□□□□□ -1.98
Col20a1-201ENSMUST00000108856 Hmcn1D3YXG0 5634 aa2.58□□□□□ -2
Col20a1-201ENSMUST00000108856 Krtap5-2Q9D5Z7 189 aa2.57□□□□□ -2
Col20a1-201ENSMUST00000108856 A0A1Y7VJH8 109 aa2.45□□□□□ -2.02
Col20a1-201ENSMUST00000108856 Gm10153A0A1B0GRL1 320 aa2.4□□□□□ -2.03
Col20a1-201ENSMUST00000108856 Gm4553A0A1B0GSA9 284 aa2.37□□□□□ -2.03
Col20a1-201ENSMUST00000108856 1110025L11RikO09048 78 aa2.35□□□□□ -2.03
Col20a1-201ENSMUST00000108856 Krtap6-5Q925H3 78 aa2.35□□□□□ -2.03
Col20a1-201ENSMUST00000108856 A030005L19RikA0A1Y7VIU2 113 aa2.32□□□□□ -2.04
Col20a1-201ENSMUST00000108856 Gm2431E9Q8S1 172 aa2.29□□□□□ -2.04
Col20a1-201ENSMUST00000108856 Gm45337A0A1B0GS71 263 aa2.27□□□□□ -2.05
Col20a1-201ENSMUST00000108856 AhnakE9Q616 5656 aaKnown RBP2.24□□□□□ -2.05
Col20a1-201ENSMUST00000108856 Gm40460A0A1B0GR10 244 aa2.21□□□□□ -2.06
Col20a1-201ENSMUST00000108856 Gm7579A0A1B0GRJ4 243 aa2.21□□□□□ -2.06
Col20a1-201ENSMUST00000108856 Krtap5-5Q2TA51 241 aa2.21□□□□□ -2.06
Col20a1-201ENSMUST00000108856 Krtap5-4Q62220 223 aa2.21□□□□□ -2.06
Col20a1-201ENSMUST00000108856 Gm10229O08631 77 aa2.21□□□□□ -2.06
Col20a1-201ENSMUST00000108856 A0A1Y7VLE6 161 aa2.16□□□□□ -2.06
Col20a1-201ENSMUST00000108856 Phgr1Q8K0G7 91 aa2.07□□□□□ -2.08
Col20a1-201ENSMUST00000108856 Gm39115A0A1B0GSH7 232 aa2.03□□□□□ -2.09
Col20a1-201ENSMUST00000108856 Krtap6-2O08884 159 aa1.86□□□□□ -2.11
Col20a1-201ENSMUST00000108856 Krtap21-1Q925H4 128 aa1.84□□□□□ -2.12
Col20a1-201ENSMUST00000108856 Gm11567Q9D141 195 aa1.79□□□□□ -2.12
Col20a1-201ENSMUST00000108856 Gm45618A0A1B0GSA0 219 aa1.76□□□□□ -2.13
Col20a1-201ENSMUST00000108856 Gm29735A0A1B0GT06 219 aa1.67□□□□□ -2.14
Col20a1-201ENSMUST00000108856 A0A1Y7VJ07 166 aa1.56□□□□□ -2.16
Col20a1-201ENSMUST00000108856 A0A286YCP9 139 aa1.36□□□□□ -2.19
Col20a1-201ENSMUST00000108856 Krtap5-1Q64507 230 aa1.29□□□□□ -2.2
Col20a1-201ENSMUST00000108856 Krtap28-10A0A1Y7VP58 119 aa1.01□□□□□ -2.25
Col20a1-201ENSMUST00000108856 A030003K21RikA0A1Y7VIM3 128 aa0.96□□□□□ -2.26
Col20a1-201ENSMUST00000108856 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Col20a1-201ENSMUST00000108856 Gm6217A0A1Y7VJK9 128 aa0.87□□□□□ -2.27
Col20a1-201ENSMUST00000108856 A030014E15RikA0A1Y7VJV2 120 aa0.87□□□□□ -2.27
Col20a1-201ENSMUST00000108856 A030005K14RikA0A1Y7VNY1 122 aa0.86□□□□□ -2.27
Col20a1-201ENSMUST00000108856 Krtap28-13A0A087WQP5 138 aa0.81□□□□□ -2.28
Col20a1-201ENSMUST00000108856 Gm7544A0A1Y7VJ58 118 aa0.78□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 147.5 ms