RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Mp68P56379 58 aa10.46□□□□□ -0.74
Ctdnep1-201ENSMUST00000108593 Syne1Q6ZWR6 8799 aa10.41□□□□□ -0.74
Ctdnep1-201ENSMUST00000108593 Lce3bQ9CQM7 98 aa10.41□□□□□ -0.74
Ctdnep1-201ENSMUST00000108593 Sprr2iO70560 76 aa10.38□□□□□ -0.75
Ctdnep1-201ENSMUST00000108593 Krtap5-2Q9D5Z7 189 aa10.38□□□□□ -0.75
Ctdnep1-201ENSMUST00000108593 Lce1kJ3QP15 125 aa10.35□□□□□ -0.75
Ctdnep1-201ENSMUST00000108593 2310046K23RikA0A0A6YVW6 87 aa10.32□□□□□ -0.76
Ctdnep1-201ENSMUST00000108593 Lce1eQ9D139 143 aa10.23□□□□□ -0.77
Ctdnep1-201ENSMUST00000108593 Gm11568A2A4M2 211 aa10.04□□□□□ -0.8
Ctdnep1-201ENSMUST00000108593 Krtap9-1Q64526 186 aa10.04□□□□□ -0.8
Ctdnep1-201ENSMUST00000108593 Gm11559Q9D3H7 191 aa9.97□□□□□ -0.81
Ctdnep1-201ENSMUST00000108593 Gm11938Q9D3H4 131 aa9.96□□□□□ -0.81
Ctdnep1-201ENSMUST00000108593 Krtap28-13A0A087WQP5 138 aa9.89□□□□□ -0.83
Ctdnep1-201ENSMUST00000108593 A030005K14RikA0A1Y7VNY1 122 aa9.88□□□□□ -0.83
Ctdnep1-201ENSMUST00000108593 A0A1Y7VLE6 161 aa9.87□□□□□ -0.83
Ctdnep1-201ENSMUST00000108593 Lce1fB9EJP6 147 aa9.85□□□□□ -0.83
Ctdnep1-201ENSMUST00000108593 Lce1cQ9D1C5 147 aa9.85□□□□□ -0.83
Ctdnep1-201ENSMUST00000108593 Gm4553A0A1B0GSA9 284 aa9.82□□□□□ -0.84
Ctdnep1-201ENSMUST00000108593 Krtap31-1Q9D644 177 aa9.67□□□□□ -0.86
Ctdnep1-201ENSMUST00000108593 A030005L19RikA0A1Y7VIU2 113 aa9.66□□□□□ -0.86
Ctdnep1-201ENSMUST00000108593 Gm11554B1AQB2 190 aa9.64□□□□□ -0.87
Ctdnep1-201ENSMUST00000108593 Mt1P02802 61 aaKnown RBP9.61□□□□□ -0.87
Ctdnep1-201ENSMUST00000108593 Macf1Q9QXZ0 7354 aaKnown RBP9.58□□□□□ -0.88
Ctdnep1-201ENSMUST00000108593 Krtap28-10A0A1Y7VP58 119 aa9.56□□□□□ -0.88
Ctdnep1-201ENSMUST00000108593 Gm45337A0A1B0GS71 263 aa9.51□□□□□ -0.89
Ctdnep1-201ENSMUST00000108593 Lce3cQ91V05 98 aa9.48□□□□□ -0.89
Ctdnep1-201ENSMUST00000108593 Gm2431E9Q8S1 172 aa9.47□□□□□ -0.89
Ctdnep1-201ENSMUST00000108593 Gm10153A0A1B0GRL1 320 aa9.43□□□□□ -0.9
Ctdnep1-201ENSMUST00000108593 Eppk1Q8R0W0 6548 aa9.4□□□□□ -0.9
Ctdnep1-201ENSMUST00000108593 Kmt2dQ6PDK2 5588 aa9.39□□□□□ -0.91
Ctdnep1-201ENSMUST00000108593 Lce3dE9Q8V1 98 aa9.34□□□□□ -0.91
Ctdnep1-201ENSMUST00000108593 Krtap19-4Q925H7 84 aa9.31□□□□□ -0.92
Ctdnep1-201ENSMUST00000108593 A030014E15RikA0A1Y7VJV2 120 aa9.22□□□□□ -0.93
Ctdnep1-201ENSMUST00000108593 Sprr2dO70555 85 aa9.21□□□□□ -0.93
Ctdnep1-201ENSMUST00000108593 Gm40460A0A1B0GR10 244 aa9.19□□□□□ -0.94
Ctdnep1-201ENSMUST00000108593 Gm7579A0A1B0GRJ4 243 aa9.19□□□□□ -0.94
Ctdnep1-201ENSMUST00000108593 Krtap5-5Q2TA51 241 aa9.19□□□□□ -0.94
Ctdnep1-201ENSMUST00000108593 Krtap5-4Q62220 223 aa9.19□□□□□ -0.94
Ctdnep1-201ENSMUST00000108593 Gm20538F6Z9R1 75 aa9.15□□□□□ -0.94
Ctdnep1-201ENSMUST00000108593 Lce3eF8VQJ0 98 aa9.15□□□□□ -0.94
Ctdnep1-201ENSMUST00000108593 Lce3fQ6PAI4 98 aa9.15□□□□□ -0.94
Ctdnep1-201ENSMUST00000108593 A0A1Y7VJ07 166 aa9.14□□□□□ -0.95
Ctdnep1-201ENSMUST00000108593 ObscnA2AAJ9 8891 aaKnown RBP9.05□□□□□ -0.96
Ctdnep1-201ENSMUST00000108593 Hmcn1D3YXG0 5634 aa9.02□□□□□ -0.97
Ctdnep1-201ENSMUST00000108593 Ndufaf8A2AMZ4 74 aa9.01□□□□□ -0.97
Ctdnep1-201ENSMUST00000108593 Gm39115A0A1B0GSH7 232 aa8.91□□□□□ -0.98
Ctdnep1-201ENSMUST00000108593 4933428G20RikQ9D3X4 101 aa8.85□□□□□ -0.99
Ctdnep1-201ENSMUST00000108593 Mt3P28184 68 aa8.82□□□□□ -1
Ctdnep1-201ENSMUST00000108593 Gm11639A0A1D5RLM8 5808 aa8.79□□□□□ -1
Ctdnep1-201ENSMUST00000108593 Lce3aQ497I5 98 aa8.76□□□□□ -1.01
Ctdnep1-201ENSMUST00000108593 Gm7544A0A1Y7VJ58 118 aa8.75□□□□□ -1.01
Ctdnep1-201ENSMUST00000108593 Muc19Q6PZE0 7524 aa8.75□□□□□ -1.01
Ctdnep1-201ENSMUST00000108593 DstQ91ZU6 7393 aaKnown RBP8.51□□□□□ -1.05
Ctdnep1-201ENSMUST00000108593 Gm10100J3QK64 120 aa8.46□□□□□ -1.06
Ctdnep1-201ENSMUST00000108593 Sprr2fO70557 76 aa8.18□□□□□ -1.1
Ctdnep1-201ENSMUST00000108593 Gpr98Q8VHN7 6298 aaKnown RBP8.16□□□□□ -1.1
Ctdnep1-201ENSMUST00000108593 Gm45618A0A1B0GSA0 219 aa8.16□□□□□ -1.1
Ctdnep1-201ENSMUST00000108593 Gm10142J3KMP7 120 aa8.16□□□□□ -1.1
Ctdnep1-201ENSMUST00000108593 Krtap4-16Q91W93 202 aa8.12□□□□□ -1.11
Ctdnep1-201ENSMUST00000108593 NebE9Q1W3 7152 aa8.03□□□□□ -1.12
Ctdnep1-201ENSMUST00000108593 Sprr2hO70559 108 aa7.94□□□□□ -1.14
Ctdnep1-201ENSMUST00000108593 AhnakE9Q616 5656 aaKnown RBP7.92□□□□□ -1.14
Ctdnep1-201ENSMUST00000108593 Sprr2eO70556 76 aa7.79□□□□□ -1.16
Ctdnep1-201ENSMUST00000108593 Gm10024A0A0A0MQA4 119 aa7.64□□□□□ -1.19
Ctdnep1-201ENSMUST00000108593 Gm9112A2AI92 75 aa7.55□□□□□ -1.2
Ctdnep1-201ENSMUST00000108593 A0A286YCP9 139 aa7.53□□□□□ -1.2
Ctdnep1-201ENSMUST00000108593 1110025L11RikO09048 78 aa7.02□□□□□ -1.29
Ctdnep1-201ENSMUST00000108593 Krtap6-5Q925H3 78 aa7.02□□□□□ -1.29
Ctdnep1-201ENSMUST00000108593 Gm29735A0A1B0GT06 219 aa6.82□□□□□ -1.32
Ctdnep1-201ENSMUST00000108593 Muc16A0A140LJ72 8478 aa6.82□□□□□ -1.32
Ctdnep1-201ENSMUST00000108593 A030003K21RikA0A1Y7VIM3 128 aa6.74□□□□□ -1.33
Ctdnep1-201ENSMUST00000108593 Gm6217A0A1Y7VJK9 128 aa6.54□□□□□ -1.36
Ctdnep1-201ENSMUST00000108593 Gm11567Q9D141 195 aa6.47□□□□□ -1.37
Ctdnep1-201ENSMUST00000108593 Gm10229O08631 77 aa6.28□□□□□ -1.4
Ctdnep1-201ENSMUST00000108593 Krtap21-1Q925H4 128 aa5.69□□□□□ -1.5
Ctdnep1-201ENSMUST00000108593 Sprr2bO70554 98 aa5.66□□□□□ -1.5
Ctdnep1-201ENSMUST00000108593 Krtap6-2O08884 159 aa5.52□□□□□ -1.53
Ctdnep1-201ENSMUST00000108593 Krtap5-1Q64507 230 aa4.92□□□□□ -1.62
Ctdnep1-201ENSMUST00000108593 Phgr1Q8K0G7 91 aa4.77□□□□□ -1.65
Ctdnep1-201ENSMUST00000108593 Gm4559A4IF42 199 aa4.4□□□□□ -1.7
Retrieved 80 of 22,080 RNA–protein pairs in 2026.7 ms