RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Mp68P56379 58 aa10,46□□□□□ -0,74
Ctdnep1-201ENSMUST00000108593 Syne1Q6ZWR6 8799 aa10,41□□□□□ -0,74
Ctdnep1-201ENSMUST00000108593 Lce3bQ9CQM7 98 aa10,41□□□□□ -0,74
Ctdnep1-201ENSMUST00000108593 Sprr2iO70560 76 aa10,38□□□□□ -0,75
Ctdnep1-201ENSMUST00000108593 Krtap5-2Q9D5Z7 189 aa10,38□□□□□ -0,75
Ctdnep1-201ENSMUST00000108593 Lce1kJ3QP15 125 aa10,35□□□□□ -0,75
Ctdnep1-201ENSMUST00000108593 2310046K23RikA0A0A6YVW6 87 aa10,32□□□□□ -0,76
Ctdnep1-201ENSMUST00000108593 Lce1eQ9D139 143 aa10,23□□□□□ -0,77
Ctdnep1-201ENSMUST00000108593 Gm11568A2A4M2 211 aa10,04□□□□□ -0,8
Ctdnep1-201ENSMUST00000108593 Krtap9-1Q64526 186 aa10,04□□□□□ -0,8
Ctdnep1-201ENSMUST00000108593 Gm11559Q9D3H7 191 aa9,97□□□□□ -0,81
Ctdnep1-201ENSMUST00000108593 Gm11938Q9D3H4 131 aa9,96□□□□□ -0,81
Ctdnep1-201ENSMUST00000108593 Krtap28-13A0A087WQP5 138 aa9,89□□□□□ -0,83
Ctdnep1-201ENSMUST00000108593 A030005K14RikA0A1Y7VNY1 122 aa9,88□□□□□ -0,83
Ctdnep1-201ENSMUST00000108593 A0A1Y7VLE6 161 aa9,87□□□□□ -0,83
Ctdnep1-201ENSMUST00000108593 Lce1fB9EJP6 147 aa9,85□□□□□ -0,83
Ctdnep1-201ENSMUST00000108593 Lce1cQ9D1C5 147 aa9,85□□□□□ -0,83
Ctdnep1-201ENSMUST00000108593 Gm4553A0A1B0GSA9 284 aa9,82□□□□□ -0,84
Ctdnep1-201ENSMUST00000108593 Krtap31-1Q9D644 177 aa9,67□□□□□ -0,86
Ctdnep1-201ENSMUST00000108593 A030005L19RikA0A1Y7VIU2 113 aa9,66□□□□□ -0,86
Ctdnep1-201ENSMUST00000108593 Gm11554B1AQB2 190 aa9,64□□□□□ -0,87
Ctdnep1-201ENSMUST00000108593 Mt1P02802 61 aaKnown RBP9,61□□□□□ -0,87
Ctdnep1-201ENSMUST00000108593 Macf1Q9QXZ0 7354 aaKnown RBP9,58□□□□□ -0,88
Ctdnep1-201ENSMUST00000108593 Krtap28-10A0A1Y7VP58 119 aa9,56□□□□□ -0,88
Ctdnep1-201ENSMUST00000108593 Gm45337A0A1B0GS71 263 aa9,51□□□□□ -0,89
Ctdnep1-201ENSMUST00000108593 Lce3cQ91V05 98 aa9,48□□□□□ -0,89
Ctdnep1-201ENSMUST00000108593 Gm2431E9Q8S1 172 aa9,47□□□□□ -0,89
Ctdnep1-201ENSMUST00000108593 Gm10153A0A1B0GRL1 320 aa9,43□□□□□ -0,9
Ctdnep1-201ENSMUST00000108593 Eppk1Q8R0W0 6548 aa9,4□□□□□ -0,9
Ctdnep1-201ENSMUST00000108593 Kmt2dQ6PDK2 5588 aa9,39□□□□□ -0,91
Ctdnep1-201ENSMUST00000108593 Lce3dE9Q8V1 98 aa9,34□□□□□ -0,91
Ctdnep1-201ENSMUST00000108593 Krtap19-4Q925H7 84 aa9,31□□□□□ -0,92
Ctdnep1-201ENSMUST00000108593 A030014E15RikA0A1Y7VJV2 120 aa9,22□□□□□ -0,93
Ctdnep1-201ENSMUST00000108593 Sprr2dO70555 85 aa9,21□□□□□ -0,93
Ctdnep1-201ENSMUST00000108593 Gm40460A0A1B0GR10 244 aa9,19□□□□□ -0,94
Ctdnep1-201ENSMUST00000108593 Gm7579A0A1B0GRJ4 243 aa9,19□□□□□ -0,94
Ctdnep1-201ENSMUST00000108593 Krtap5-5Q2TA51 241 aa9,19□□□□□ -0,94
Ctdnep1-201ENSMUST00000108593 Krtap5-4Q62220 223 aa9,19□□□□□ -0,94
Ctdnep1-201ENSMUST00000108593 Gm20538F6Z9R1 75 aa9,15□□□□□ -0,94
Ctdnep1-201ENSMUST00000108593 Lce3eF8VQJ0 98 aa9,15□□□□□ -0,94
Ctdnep1-201ENSMUST00000108593 Lce3fQ6PAI4 98 aa9,15□□□□□ -0,94
Ctdnep1-201ENSMUST00000108593 A0A1Y7VJ07 166 aa9,14□□□□□ -0,95
Ctdnep1-201ENSMUST00000108593 ObscnA2AAJ9 8891 aaKnown RBP9,05□□□□□ -0,96
Ctdnep1-201ENSMUST00000108593 Hmcn1D3YXG0 5634 aa9,02□□□□□ -0,97
Ctdnep1-201ENSMUST00000108593 Ndufaf8A2AMZ4 74 aa9,01□□□□□ -0,97
Ctdnep1-201ENSMUST00000108593 Gm39115A0A1B0GSH7 232 aa8,91□□□□□ -0,98
Ctdnep1-201ENSMUST00000108593 4933428G20RikQ9D3X4 101 aa8,85□□□□□ -0,99
Ctdnep1-201ENSMUST00000108593 Mt3P28184 68 aa8,82□□□□□ -1
Ctdnep1-201ENSMUST00000108593 Gm11639A0A1D5RLM8 5808 aa8,79□□□□□ -1
Ctdnep1-201ENSMUST00000108593 Lce3aQ497I5 98 aa8,76□□□□□ -1,01
Ctdnep1-201ENSMUST00000108593 Gm7544A0A1Y7VJ58 118 aa8,75□□□□□ -1,01
Ctdnep1-201ENSMUST00000108593 Muc19Q6PZE0 7524 aa8,75□□□□□ -1,01
Ctdnep1-201ENSMUST00000108593 DstQ91ZU6 7393 aaKnown RBP8,51□□□□□ -1,05
Ctdnep1-201ENSMUST00000108593 Gm10100J3QK64 120 aa8,46□□□□□ -1,06
Ctdnep1-201ENSMUST00000108593 Sprr2fO70557 76 aa8,18□□□□□ -1,1
Ctdnep1-201ENSMUST00000108593 Gpr98Q8VHN7 6298 aaKnown RBP8,16□□□□□ -1,1
Ctdnep1-201ENSMUST00000108593 Gm45618A0A1B0GSA0 219 aa8,16□□□□□ -1,1
Ctdnep1-201ENSMUST00000108593 Gm10142J3KMP7 120 aa8,16□□□□□ -1,1
Ctdnep1-201ENSMUST00000108593 Krtap4-16Q91W93 202 aa8,12□□□□□ -1,11
Ctdnep1-201ENSMUST00000108593 NebE9Q1W3 7152 aa8,03□□□□□ -1,12
Ctdnep1-201ENSMUST00000108593 Sprr2hO70559 108 aa7,94□□□□□ -1,14
Ctdnep1-201ENSMUST00000108593 AhnakE9Q616 5656 aaKnown RBP7,92□□□□□ -1,14
Ctdnep1-201ENSMUST00000108593 Sprr2eO70556 76 aa7,79□□□□□ -1,16
Ctdnep1-201ENSMUST00000108593 Gm10024A0A0A0MQA4 119 aa7,64□□□□□ -1,19
Ctdnep1-201ENSMUST00000108593 Gm9112A2AI92 75 aa7,55□□□□□ -1,2
Ctdnep1-201ENSMUST00000108593 A0A286YCP9 139 aa7,53□□□□□ -1,2
Ctdnep1-201ENSMUST00000108593 1110025L11RikO09048 78 aa7,02□□□□□ -1,29
Ctdnep1-201ENSMUST00000108593 Krtap6-5Q925H3 78 aa7,02□□□□□ -1,29
Ctdnep1-201ENSMUST00000108593 Gm29735A0A1B0GT06 219 aa6,82□□□□□ -1,32
Ctdnep1-201ENSMUST00000108593 Muc16A0A140LJ72 8478 aa6,82□□□□□ -1,32
Ctdnep1-201ENSMUST00000108593 A030003K21RikA0A1Y7VIM3 128 aa6,74□□□□□ -1,33
Ctdnep1-201ENSMUST00000108593 Gm6217A0A1Y7VJK9 128 aa6,54□□□□□ -1,36
Ctdnep1-201ENSMUST00000108593 Gm11567Q9D141 195 aa6,47□□□□□ -1,37
Ctdnep1-201ENSMUST00000108593 Gm10229O08631 77 aa6,28□□□□□ -1,4
Ctdnep1-201ENSMUST00000108593 Krtap21-1Q925H4 128 aa5,69□□□□□ -1,5
Ctdnep1-201ENSMUST00000108593 Sprr2bO70554 98 aa5,66□□□□□ -1,5
Ctdnep1-201ENSMUST00000108593 Krtap6-2O08884 159 aa5,52□□□□□ -1,53
Ctdnep1-201ENSMUST00000108593 Krtap5-1Q64507 230 aa4,92□□□□□ -1,62
Ctdnep1-201ENSMUST00000108593 Phgr1Q8K0G7 91 aa4,77□□□□□ -1,65
Ctdnep1-201ENSMUST00000108593 Gm4559A4IF42 199 aa4,4□□□□□ -1,7
Retrieved 80 of 22,080 RNA–protein pairs in 43,1 ms