RNA–Protein interactions for RNA: ENSMUST00000108275.1

Ift20-202, Transcript of Intraflagellar transport protein 20 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift20, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift20-202ENSMUST00000108275 Krtap19-9bQ99NG9 58 aa4.92□□□□□ -1.62
Ift20-202ENSMUST00000108275 Krtap4-9B1AQA9 244 aa4.89□□□□□ -1.63
Ift20-202ENSMUST00000108275 Gm6358A0A087WPH4 74 aa4.86□□□□□ -1.63
Ift20-202ENSMUST00000108275 Gm10100J3QK64 120 aa4.86□□□□□ -1.63
Ift20-202ENSMUST00000108275 Tnp1P10856 55 aa4.85□□□□□ -1.63
Ift20-202ENSMUST00000108275 Lce1kJ3QP15 125 aa4.84□□□□□ -1.63
Ift20-202ENSMUST00000108275 Mt2P02798 61 aa4.78□□□□□ -1.64
Ift20-202ENSMUST00000108275 Mt4P47945 62 aa4.77□□□□□ -1.65
Ift20-202ENSMUST00000108275 Krtap6-3A0A087WQL6 57 aa4.74□□□□□ -1.65
Ift20-202ENSMUST00000108275 Krtap4-13Q9D7P3 165 aa4.73□□□□□ -1.65
Ift20-202ENSMUST00000108275 Lce1cQ9D1C5 147 aa4.67□□□□□ -1.66
Ift20-202ENSMUST00000108275 Lce1fB9EJP6 147 aa4.63□□□□□ -1.67
Ift20-202ENSMUST00000108275 Gm20538F6Z9R1 75 aa4.62□□□□□ -1.67
Ift20-202ENSMUST00000108275 2310046K23RikA0A0A6YVW6 87 aa4.57□□□□□ -1.68
Ift20-202ENSMUST00000108275 Krtap22-2J3QNX6 67 aa4.56□□□□□ -1.68
Ift20-202ENSMUST00000108275 Sprr2kO70562 68 aa4.56□□□□□ -1.68
Ift20-202ENSMUST00000108275 Gm45618A0A1B0GSA0 219 aa4.52□□□□□ -1.69
Ift20-202ENSMUST00000108275 Krtap9-3Q3V2C1 136 aa4.5□□□□□ -1.69
Ift20-202ENSMUST00000108275 Gm2431E9Q8S1 172 aa4.49□□□□□ -1.69
Ift20-202ENSMUST00000108275 Gm11554B1AQB2 190 aa4.48□□□□□ -1.69
Ift20-202ENSMUST00000108275 2300003K06RikA2A4M0 262 aa4.46□□□□□ -1.7
Ift20-202ENSMUST00000108275 Gm39115A0A1B0GSH7 232 aa4.44□□□□□ -1.7
Ift20-202ENSMUST00000108275 Gm11567Q9D141 195 aa4.43□□□□□ -1.7
Ift20-202ENSMUST00000108275 Ndufaf8A2AMZ4 74 aa4.41□□□□□ -1.7
Ift20-202ENSMUST00000108275 Krtap20-2E9Q0A8 60 aa4.32□□□□□ -1.72
Ift20-202ENSMUST00000108275 Gm29735A0A1B0GT06 219 aa4.31□□□□□ -1.72
Ift20-202ENSMUST00000108275 Eppk1Q8R0W0 6548 aa4.26□□□□□ -1.73
Ift20-202ENSMUST00000108275 Sprr2gO70558 76 aa4.24□□□□□ -1.73
Ift20-202ENSMUST00000108275 Gm10272F7CZ33 110 aa4.21□□□□□ -1.74
Ift20-202ENSMUST00000108275 Gm11938Q9D3H4 131 aa4.12□□□□□ -1.75
Ift20-202ENSMUST00000108275 Gm11639A0A1D5RLM8 5808 aa4.08□□□□□ -1.76
Ift20-202ENSMUST00000108275 Sprr2dO70555 85 aa4.07□□□□□ -1.76
Ift20-202ENSMUST00000108275 Macf1Q9QXZ0 7354 aaKnown RBP4.04□□□□□ -1.76
Ift20-202ENSMUST00000108275 Gm10142J3KMP7 120 aa4.04□□□□□ -1.76
Ift20-202ENSMUST00000108275 4933428G20RikQ9D3X4 101 aa4□□□□□ -1.77
Ift20-202ENSMUST00000108275 Lce3bQ9CQM7 98 aa3.97□□□□□ -1.77
Ift20-202ENSMUST00000108275 Gpr98Q8VHN7 6298 aaKnown RBP3.97□□□□□ -1.77
Ift20-202ENSMUST00000108275 Krtap19-4Q925H7 84 aa3.93□□□□□ -1.78
Ift20-202ENSMUST00000108275 Syne1Q6ZWR6 8799 aa3.89□□□□□ -1.79
Ift20-202ENSMUST00000108275 Gm10153A0A1B0GRL1 320 aa3.87□□□□□ -1.79
Ift20-202ENSMUST00000108275 Muc19Q6PZE0 7524 aa3.83□□□□□ -1.8
Ift20-202ENSMUST00000108275 Gm9112A2AI92 75 aa3.83□□□□□ -1.8
Ift20-202ENSMUST00000108275 Kmt2dQ6PDK2 5588 aa3.8□□□□□ -1.8
Ift20-202ENSMUST00000108275 Krtap5-2Q9D5Z7 189 aa3.79□□□□□ -1.8
Ift20-202ENSMUST00000108275 Sprr2iO70560 76 aa3.76□□□□□ -1.81
Ift20-202ENSMUST00000108275 Lce3cQ91V05 98 aa3.74□□□□□ -1.81
Ift20-202ENSMUST00000108275 Lce3dE9Q8V1 98 aa3.7□□□□□ -1.82
Ift20-202ENSMUST00000108275 Krtap5-4Q62220 223 aa3.7□□□□□ -1.82
Ift20-202ENSMUST00000108275 Gm4553A0A1B0GSA9 284 aa3.68□□□□□ -1.82
Ift20-202ENSMUST00000108275 Lce3eF8VQJ0 98 aa3.68□□□□□ -1.82
Ift20-202ENSMUST00000108275 Lce3fQ6PAI4 98 aa3.68□□□□□ -1.82
Ift20-202ENSMUST00000108275 Gm45337A0A1B0GS71 263 aa3.67□□□□□ -1.82
Ift20-202ENSMUST00000108275 Mt1P02802 61 aaKnown RBP3.65□□□□□ -1.83
Ift20-202ENSMUST00000108275 Mt3P28184 68 aa3.65□□□□□ -1.83
Ift20-202ENSMUST00000108275 Gm11568A2A4M2 211 aa3.6□□□□□ -1.83
Ift20-202ENSMUST00000108275 Krtap9-1Q64526 186 aa3.6□□□□□ -1.83
Ift20-202ENSMUST00000108275 NebE9Q1W3 7152 aa3.58□□□□□ -1.84
Ift20-202ENSMUST00000108275 ObscnA2AAJ9 8891 aaKnown RBP3.57□□□□□ -1.84
Ift20-202ENSMUST00000108275 DstQ91ZU6 7393 aaKnown RBP3.57□□□□□ -1.84
Ift20-202ENSMUST00000108275 Lce3aQ497I5 98 aa3.53□□□□□ -1.84
Ift20-202ENSMUST00000108275 Sprr2hO70559 108 aa3.52□□□□□ -1.85
Ift20-202ENSMUST00000108275 Hmcn1D3YXG0 5634 aa3.45□□□□□ -1.86
Ift20-202ENSMUST00000108275 Krtap4-16Q91W93 202 aa3.4□□□□□ -1.87
Ift20-202ENSMUST00000108275 Sprr2eO70556 76 aa3.36□□□□□ -1.87
Ift20-202ENSMUST00000108275 Gm40460A0A1B0GR10 244 aa3.3□□□□□ -1.88
Ift20-202ENSMUST00000108275 Gm7579A0A1B0GRJ4 243 aa3.3□□□□□ -1.88
Ift20-202ENSMUST00000108275 Krtap5-5Q2TA51 241 aa3.3□□□□□ -1.88
Ift20-202ENSMUST00000108275 Sprr2fO70557 76 aa3.22□□□□□ -1.89
Ift20-202ENSMUST00000108275 AhnakE9Q616 5656 aaKnown RBP3.17□□□□□ -1.9
Ift20-202ENSMUST00000108275 Gm10024A0A0A0MQA4 119 aa3.05□□□□□ -1.92
Ift20-202ENSMUST00000108275 Krtap5-1Q64507 230 aa2.98□□□□□ -1.93
Ift20-202ENSMUST00000108275 Gm4559A4IF42 199 aa2.83□□□□□ -1.96
Ift20-202ENSMUST00000108275 1110025L11RikO09048 78 aa2.77□□□□□ -1.97
Ift20-202ENSMUST00000108275 Krtap6-5Q925H3 78 aa2.77□□□□□ -1.97
Ift20-202ENSMUST00000108275 Muc16A0A140LJ72 8478 aa2.57□□□□□ -2
Ift20-202ENSMUST00000108275 Sprr2bO70554 98 aa2.53□□□□□ -2
Ift20-202ENSMUST00000108275 Gm10229O08631 77 aa2.45□□□□□ -2.02
Ift20-202ENSMUST00000108275 Krtap21-1Q925H4 128 aa2.26□□□□□ -2.05
Ift20-202ENSMUST00000108275 Krtap6-2O08884 159 aa2.09□□□□□ -2.07
Ift20-202ENSMUST00000108275 Phgr1Q8K0G7 91 aa2.07□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 99.4 ms