RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 2310046K23RikA0A0A6YVW6 87 aa7.48□□□□□ -1.21
Snrnp40-201ENSMUST00000105994 Gm10272F7CZ33 110 aa7.35□□□□□ -1.23
Snrnp40-201ENSMUST00000105994 Krtap5-2Q9D5Z7 189 aa7.32□□□□□ -1.24
Snrnp40-201ENSMUST00000105994 Sprr2iO70560 76 aa7.25□□□□□ -1.25
Snrnp40-201ENSMUST00000105994 Syne1Q6ZWR6 8799 aa7.25□□□□□ -1.25
Snrnp40-201ENSMUST00000105994 Lce1kJ3QP15 125 aa7.25□□□□□ -1.25
Snrnp40-201ENSMUST00000105994 Gm11559Q9D3H7 191 aa7.16□□□□□ -1.26
Snrnp40-201ENSMUST00000105994 Eppk1Q8R0W0 6548 aa7.12□□□□□ -1.27
Snrnp40-201ENSMUST00000105994 Lce3bQ9CQM7 98 aa7.1□□□□□ -1.27
Snrnp40-201ENSMUST00000105994 Macf1Q9QXZ0 7354 aaKnown RBP7.05□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 Gm11568A2A4M2 211 aa7.03□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 Krtap9-1Q64526 186 aa7.03□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 Gm11938Q9D3H4 131 aa7.03□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 A030005L19RikA0A1Y7VIU2 113 aa7.02□□□□□ -1.29
Snrnp40-201ENSMUST00000105994 Gm11554B1AQB2 190 aa6.99□□□□□ -1.29
Snrnp40-201ENSMUST00000105994 Gm4553A0A1B0GSA9 284 aa6.98□□□□□ -1.29
Snrnp40-201ENSMUST00000105994 Gm20538F6Z9R1 75 aa6.92□□□□□ -1.3
Snrnp40-201ENSMUST00000105994 Kmt2dQ6PDK2 5588 aa6.9□□□□□ -1.3
Snrnp40-201ENSMUST00000105994 Lce1fB9EJP6 147 aa6.8□□□□□ -1.32
Snrnp40-201ENSMUST00000105994 Lce1cQ9D1C5 147 aa6.8□□□□□ -1.32
Snrnp40-201ENSMUST00000105994 Gm2431E9Q8S1 172 aa6.77□□□□□ -1.33
Snrnp40-201ENSMUST00000105994 Gm11639A0A1D5RLM8 5808 aa6.73□□□□□ -1.33
Snrnp40-201ENSMUST00000105994 Sprr2dO70555 85 aa6.71□□□□□ -1.34
Snrnp40-201ENSMUST00000105994 Gm45337A0A1B0GS71 263 aa6.7□□□□□ -1.34
Snrnp40-201ENSMUST00000105994 Ndufaf8A2AMZ4 74 aa6.69□□□□□ -1.34
Snrnp40-201ENSMUST00000105994 Muc19Q6PZE0 7524 aa6.6□□□□□ -1.35
Snrnp40-201ENSMUST00000105994 Krtap19-4Q925H7 84 aa6.57□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Gm10153A0A1B0GRL1 320 aa6.57□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Mt1P02802 61 aaKnown RBP6.56□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Hmcn1D3YXG0 5634 aa6.55□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Lce3cQ91V05 98 aa6.54□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Krtap28-10A0A1Y7VP58 119 aa6.52□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 A0A1Y7VLE6 161 aa6.49□□□□□ -1.37
Snrnp40-201ENSMUST00000105994 Lce3dE9Q8V1 98 aa6.46□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Krtap28-13A0A087WQP5 138 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Gm40460A0A1B0GR10 244 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Gm7579A0A1B0GRJ4 243 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Krtap5-5Q2TA51 241 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Krtap5-4Q62220 223 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 A030005K14RikA0A1Y7VNY1 122 aa6.38□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Lce3eF8VQJ0 98 aa6.37□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Lce3fQ6PAI4 98 aa6.37□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Gpr98Q8VHN7 6298 aaKnown RBP6.34□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Gm39115A0A1B0GSH7 232 aa6.34□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 4933428G20RikQ9D3X4 101 aa6.34□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 DstQ91ZU6 7393 aaKnown RBP6.31□□□□□ -1.4
Snrnp40-201ENSMUST00000105994 ObscnA2AAJ9 8891 aaKnown RBP6.21□□□□□ -1.41
Snrnp40-201ENSMUST00000105994 Gm10100J3QK64 120 aa6.12□□□□□ -1.43
Snrnp40-201ENSMUST00000105994 Lce3aQ497I5 98 aa6.1□□□□□ -1.43
Snrnp40-201ENSMUST00000105994 NebE9Q1W3 7152 aa6.06□□□□□ -1.44
Snrnp40-201ENSMUST00000105994 Mt3P28184 68 aa6.05□□□□□ -1.44
Snrnp40-201ENSMUST00000105994 Krtap4-16Q91W93 202 aa5.95□□□□□ -1.46
Snrnp40-201ENSMUST00000105994 Gm10142J3KMP7 120 aa5.93□□□□□ -1.46
Snrnp40-201ENSMUST00000105994 Gm45618A0A1B0GSA0 219 aa5.89□□□□□ -1.47
Snrnp40-201ENSMUST00000105994 Sprr2fO70557 76 aa5.89□□□□□ -1.47
Snrnp40-201ENSMUST00000105994 A0A1Y7VJ07 166 aa5.84□□□□□ -1.47
Snrnp40-201ENSMUST00000105994 AhnakE9Q616 5656 aaKnown RBP5.83□□□□□ -1.48
Snrnp40-201ENSMUST00000105994 Sprr2hO70559 108 aa5.79□□□□□ -1.48
Snrnp40-201ENSMUST00000105994 Gm7544A0A1Y7VJ58 118 aa5.76□□□□□ -1.49
Snrnp40-201ENSMUST00000105994 A030014E15RikA0A1Y7VJV2 120 aa5.74□□□□□ -1.49
Snrnp40-201ENSMUST00000105994 Gm9112A2AI92 75 aa5.64□□□□□ -1.51
Snrnp40-201ENSMUST00000105994 Sprr2eO70556 76 aa5.35□□□□□ -1.55
Snrnp40-201ENSMUST00000105994 Gm10024A0A0A0MQA4 119 aa5.23□□□□□ -1.57
Snrnp40-201ENSMUST00000105994 A030003K21RikA0A1Y7VIM3 128 aa4.96□□□□□ -1.62
Snrnp40-201ENSMUST00000105994 Krtap31-1Q9D644 177 aa4.94□□□□□ -1.62
Snrnp40-201ENSMUST00000105994 Muc16A0A140LJ72 8478 aa4.87□□□□□ -1.63
Snrnp40-201ENSMUST00000105994 1110025L11RikO09048 78 aa4.86□□□□□ -1.63
Snrnp40-201ENSMUST00000105994 Krtap6-5Q925H3 78 aa4.86□□□□□ -1.63
Snrnp40-201ENSMUST00000105994 Krtap31-2Q8CAY5 177 aa4.77□□□□□ -1.65
Snrnp40-201ENSMUST00000105994 Gm29735A0A1B0GT06 219 aa4.75□□□□□ -1.65
Snrnp40-201ENSMUST00000105994 Gm6217A0A1Y7VJK9 128 aa4.74□□□□□ -1.65
Snrnp40-201ENSMUST00000105994 A0A286YCP9 139 aa4.61□□□□□ -1.67
Snrnp40-201ENSMUST00000105994 Gm11567Q9D141 195 aa4.49□□□□□ -1.69
Snrnp40-201ENSMUST00000105994 Gm10229O08631 77 aa4.33□□□□□ -1.72
Snrnp40-201ENSMUST00000105994 Sprr2bO70554 98 aa4.13□□□□□ -1.75
Snrnp40-201ENSMUST00000105994 Krtap21-1Q925H4 128 aa3.95□□□□□ -1.78
Snrnp40-201ENSMUST00000105994 Krtap6-2O08884 159 aa3.76□□□□□ -1.81
Snrnp40-201ENSMUST00000105994 Krtap5-1Q64507 230 aa3.63□□□□□ -1.83
Snrnp40-201ENSMUST00000105994 Phgr1Q8K0G7 91 aa3.45□□□□□ -1.86
Snrnp40-201ENSMUST00000105994 Gm4559A4IF42 199 aa2.76□□□□□ -1.97
Retrieved 80 of 22,080 RNA–protein pairs in 11.4 ms