RNA–Protein interactions for RNA: ENSMUST00000102843.9

Rtn4-205, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 4,618 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-205ENSMUST00000102843 Krtap4-2B1AQ85 167 aa4.29□□□□□ -1.72
Rtn4-205ENSMUST00000102843 Sprr2dO70555 85 aa4.26□□□□□ -1.73
Rtn4-205ENSMUST00000102843 Fsip2A2ARZ3 6995 aa4.26□□□□□ -1.73
Rtn4-205ENSMUST00000102843 Sprr2eO70556 76 aa4.24□□□□□ -1.73
Rtn4-205ENSMUST00000102843 Gm11938Q9D3H4 131 aa4.2□□□□□ -1.74
Rtn4-205ENSMUST00000102843 Muc5bE9Q5I3 4800 aa4.18□□□□□ -1.74
Rtn4-205ENSMUST00000102843 Krtap4-1Q3UUY3 169 aa4.14□□□□□ -1.75
Rtn4-205ENSMUST00000102843 Gm11562A0PK51 136 aa4.13□□□□□ -1.75
Rtn4-205ENSMUST00000102843 Sprr2hO70559 108 aa4.09□□□□□ -1.75
Rtn4-205ENSMUST00000102843 Krtap31-1Q9D644 177 aa4.04□□□□□ -1.76
Rtn4-205ENSMUST00000102843 Gm11564A2A4L9 201 aa4.04□□□□□ -1.76
Rtn4-205ENSMUST00000102843 Gm11563B1AQ90 168 aa4.04□□□□□ -1.76
Rtn4-205ENSMUST00000102843 Gm11595B1AQA7 289 aa4.04□□□□□ -1.76
Rtn4-205ENSMUST00000102843 Krtap4-8B1AQA8 209 aa4.04□□□□□ -1.76
Rtn4-205ENSMUST00000102843 Krtap4-9B1AQA9 244 aa4.04□□□□□ -1.76
Rtn4-205ENSMUST00000102843 Gm11596B1AQB0 205 aa4.03□□□□□ -1.76
Rtn4-205ENSMUST00000102843 2300003K06RikA2A4M0 262 aa4.02□□□□□ -1.77
Rtn4-205ENSMUST00000102843 Sprr2fO70557 76 aa4.02□□□□□ -1.77
Rtn4-205ENSMUST00000102843 Syne2Q6ZWQ0 6874 aaKnown RBP4.02□□□□□ -1.77
Rtn4-205ENSMUST00000102843 SspoQ8CG65 4998 aa4.01□□□□□ -1.77
Rtn4-205ENSMUST00000102843 Macf1Q9QXZ0 7354 aaKnown RBP3.98□□□□□ -1.77
Rtn4-205ENSMUST00000102843 ObscnA2AAJ9 8891 aaKnown RBP3.95□□□□□ -1.78
Rtn4-205ENSMUST00000102843 Krtap4-7Q9D732 168 aa3.94□□□□□ -1.78
Rtn4-205ENSMUST00000102843 Lce1kJ3QP15 125 aa3.94□□□□□ -1.78
Rtn4-205ENSMUST00000102843 Krtap4-13Q9D7P3 165 aa3.91□□□□□ -1.78
Rtn4-205ENSMUST00000102843 A0A1Y7VJH8 109 aa3.86□□□□□ -1.79
Rtn4-205ENSMUST00000102843 Krtap28-10A0A1Y7VP58 119 aa3.77□□□□□ -1.81
Rtn4-205ENSMUST00000102843 Mt3P28184 68 aa3.75□□□□□ -1.81
Rtn4-205ENSMUST00000102843 A0A1Y7VLE6 161 aa3.74□□□□□ -1.81
Rtn4-205ENSMUST00000102843 Krtap4-16Q91W93 202 aa3.74□□□□□ -1.81
Rtn4-205ENSMUST00000102843 Lce1a1Q9CQH5 143 aa3.74□□□□□ -1.81
Rtn4-205ENSMUST00000102843 Krtap28-13A0A087WQP5 138 aa3.65□□□□□ -1.83
Rtn4-205ENSMUST00000102843 Mt1P02802 61 aaKnown RBP3.62□□□□□ -1.83
Rtn4-205ENSMUST00000102843 Gm11555B1AQ89 175 aa3.61□□□□□ -1.83
Rtn4-205ENSMUST00000102843 DstQ91ZU6 7393 aaKnown RBP3.57□□□□□ -1.84
Rtn4-205ENSMUST00000102843 Muc19Q6PZE0 7524 aa3.53□□□□□ -1.84
Rtn4-205ENSMUST00000102843 Krtap6-3A0A087WQL6 57 aa3.53□□□□□ -1.84
Rtn4-205ENSMUST00000102843 A030005K14RikA0A1Y7VNY1 122 aa3.52□□□□□ -1.85
Rtn4-205ENSMUST00000102843 A030005L19RikA0A1Y7VIU2 113 aa3.49□□□□□ -1.85
Rtn4-205ENSMUST00000102843 Krtap20-2E9Q0A8 60 aa3.49□□□□□ -1.85
Rtn4-205ENSMUST00000102843 Gm11554B1AQB2 190 aa3.47□□□□□ -1.85
Rtn4-205ENSMUST00000102843 NebE9Q1W3 7152 aa3.44□□□□□ -1.86
Rtn4-205ENSMUST00000102843 A0A1Y7VJ07 166 aa3.36□□□□□ -1.87
Rtn4-205ENSMUST00000102843 A030003K21RikA0A1Y7VIM3 128 aa3.35□□□□□ -1.87
Rtn4-205ENSMUST00000102843 Gm7544A0A1Y7VJ58 118 aa3.31□□□□□ -1.88
Rtn4-205ENSMUST00000102843 Kmt2dQ6PDK2 5588 aa3.25□□□□□ -1.89
Rtn4-205ENSMUST00000102843 Sprr2bO70554 98 aa3.17□□□□□ -1.9
Rtn4-205ENSMUST00000102843 A030014E15RikA0A1Y7VJV2 120 aa3.15□□□□□ -1.91
Rtn4-205ENSMUST00000102843 Gm6217A0A1Y7VJK9 128 aa3.14□□□□□ -1.91
Rtn4-205ENSMUST00000102843 Eppk1Q8R0W0 6548 aa2.99□□□□□ -1.93
Rtn4-205ENSMUST00000102843 1110025L11RikO09048 78 aa2.96□□□□□ -1.94
Rtn4-205ENSMUST00000102843 Krtap6-5Q925H3 78 aa2.96□□□□□ -1.94
Rtn4-205ENSMUST00000102843 Gm11568A2A4M2 211 aa2.94□□□□□ -1.94
Rtn4-205ENSMUST00000102843 Krtap9-1Q64526 186 aa2.94□□□□□ -1.94
Rtn4-205ENSMUST00000102843 Gm11639A0A1D5RLM8 5808 aa2.87□□□□□ -1.95
Rtn4-205ENSMUST00000102843 Gm11559Q9D3H7 191 aa2.83□□□□□ -1.96
Rtn4-205ENSMUST00000102843 Gpr98Q8VHN7 6298 aaKnown RBP2.8□□□□□ -1.96
Rtn4-205ENSMUST00000102843 Krtap31-2Q8CAY5 177 aa2.79□□□□□ -1.96
Rtn4-205ENSMUST00000102843 Gm10229O08631 77 aa2.75□□□□□ -1.97
Rtn4-205ENSMUST00000102843 Hmcn1D3YXG0 5634 aa2.74□□□□□ -1.97
Rtn4-205ENSMUST00000102843 Krtap5-2Q9D5Z7 189 aa2.71□□□□□ -1.98
Rtn4-205ENSMUST00000102843 Gm4553A0A1B0GSA9 284 aa2.56□□□□□ -2
Rtn4-205ENSMUST00000102843 Phgr1Q8K0G7 91 aa2.56□□□□□ -2
Rtn4-205ENSMUST00000102843 A0A286YCP9 139 aa2.5□□□□□ -2.01
Rtn4-205ENSMUST00000102843 Gm2431E9Q8S1 172 aa2.49□□□□□ -2.01
Rtn4-205ENSMUST00000102843 Gm10153A0A1B0GRL1 320 aa2.39□□□□□ -2.03
Rtn4-205ENSMUST00000102843 AhnakE9Q616 5656 aaKnown RBP2.36□□□□□ -2.03
Rtn4-205ENSMUST00000102843 Gm45337A0A1B0GS71 263 aa2.36□□□□□ -2.03
Rtn4-205ENSMUST00000102843 Gm40460A0A1B0GR10 244 aa2.29□□□□□ -2.04
Rtn4-205ENSMUST00000102843 Gm7579A0A1B0GRJ4 243 aa2.29□□□□□ -2.04
Rtn4-205ENSMUST00000102843 Krtap5-5Q2TA51 241 aa2.29□□□□□ -2.04
Rtn4-205ENSMUST00000102843 Krtap5-4Q62220 223 aa2.29□□□□□ -2.04
Rtn4-205ENSMUST00000102843 Gm39115A0A1B0GSH7 232 aa2.26□□□□□ -2.05
Rtn4-205ENSMUST00000102843 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Rtn4-205ENSMUST00000102843 Krtap21-1Q925H4 128 aa2.18□□□□□ -2.06
Rtn4-205ENSMUST00000102843 Gm45618A0A1B0GSA0 219 aa2.15□□□□□ -2.06
Rtn4-205ENSMUST00000102843 Gm11567Q9D141 195 aa1.91□□□□□ -2.1
Rtn4-205ENSMUST00000102843 Gm29735A0A1B0GT06 219 aa1.69□□□□□ -2.14
Rtn4-205ENSMUST00000102843 Krtap5-1Q64507 230 aa1.35□□□□□ -2.19
Rtn4-205ENSMUST00000102843 Gm4559A4IF42 199 aa1.13□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 106.9 ms