RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Gm11938Q9D3H4 131 aa6.34□□□□□ -1.39
Sqstm1-202ENSMUST00000102774 Sprr2gO70558 76 aa6.18□□□□□ -1.42
Sqstm1-202ENSMUST00000102774 Sprr2iO70560 76 aa6.16□□□□□ -1.42
Sqstm1-202ENSMUST00000102774 A0A1Y7VJH8 109 aa6.15□□□□□ -1.43
Sqstm1-202ENSMUST00000102774 Lce1kJ3QP15 125 aa6.14□□□□□ -1.43
Sqstm1-202ENSMUST00000102774 Ndufaf8A2AMZ4 74 aa6.13□□□□□ -1.43
Sqstm1-202ENSMUST00000102774 Sprr2dO70555 85 aa6.11□□□□□ -1.43
Sqstm1-202ENSMUST00000102774 Krtap20-2E9Q0A8 60 aa6.08□□□□□ -1.44
Sqstm1-202ENSMUST00000102774 Krtap5-2Q9D5Z7 189 aa6.01□□□□□ -1.45
Sqstm1-202ENSMUST00000102774 Lce1eQ9D139 143 aa6□□□□□ -1.45
Sqstm1-202ENSMUST00000102774 Lce1a1Q9CQH5 143 aa5.97□□□□□ -1.45
Sqstm1-202ENSMUST00000102774 Lce1fB9EJP6 147 aa5.96□□□□□ -1.46
Sqstm1-202ENSMUST00000102774 Lce1cQ9D1C5 147 aa5.96□□□□□ -1.46
Sqstm1-202ENSMUST00000102774 Krtap19-4Q925H7 84 aa5.95□□□□□ -1.46
Sqstm1-202ENSMUST00000102774 Lce3cQ91V05 98 aa5.94□□□□□ -1.46
Sqstm1-202ENSMUST00000102774 Gm11568A2A4M2 211 aa5.93□□□□□ -1.46
Sqstm1-202ENSMUST00000102774 Krtap9-1Q64526 186 aa5.93□□□□□ -1.46
Sqstm1-202ENSMUST00000102774 Mt1P02802 61 aaKnown RBP5.87□□□□□ -1.47
Sqstm1-202ENSMUST00000102774 Lce3dE9Q8V1 98 aa5.84□□□□□ -1.48
Sqstm1-202ENSMUST00000102774 Lce3eF8VQJ0 98 aa5.8□□□□□ -1.48
Sqstm1-202ENSMUST00000102774 Lce3fQ6PAI4 98 aa5.8□□□□□ -1.48
Sqstm1-202ENSMUST00000102774 4933428G20RikQ9D3X4 101 aa5.75□□□□□ -1.49
Sqstm1-202ENSMUST00000102774 Gm11559Q9D3H7 191 aa5.66□□□□□ -1.5
Sqstm1-202ENSMUST00000102774 Gm10100J3QK64 120 aa5.64□□□□□ -1.51
Sqstm1-202ENSMUST00000102774 ObscnA2AAJ9 8891 aaKnown RBP5.63□□□□□ -1.51
Sqstm1-202ENSMUST00000102774 Gm9112A2AI92 75 aa5.62□□□□□ -1.51
Sqstm1-202ENSMUST00000102774 Gm4553A0A1B0GSA9 284 aa5.61□□□□□ -1.51
Sqstm1-202ENSMUST00000102774 Gm10153A0A1B0GRL1 320 aa5.58□□□□□ -1.52
Sqstm1-202ENSMUST00000102774 Macf1Q9QXZ0 7354 aaKnown RBP5.56□□□□□ -1.52
Sqstm1-202ENSMUST00000102774 Lce3aQ497I5 98 aa5.55□□□□□ -1.52
Sqstm1-202ENSMUST00000102774 Gm45337A0A1B0GS71 263 aa5.49□□□□□ -1.53
Sqstm1-202ENSMUST00000102774 Gm11554B1AQB2 190 aa5.49□□□□□ -1.53
Sqstm1-202ENSMUST00000102774 Gm10142J3KMP7 120 aa5.48□□□□□ -1.53
Sqstm1-202ENSMUST00000102774 Gm2431E9Q8S1 172 aa5.43□□□□□ -1.54
Sqstm1-202ENSMUST00000102774 Hmcn1D3YXG0 5634 aa5.34□□□□□ -1.55
Sqstm1-202ENSMUST00000102774 Kmt2dQ6PDK2 5588 aa5.32□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 Gm40460A0A1B0GR10 244 aa5.31□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 Gm7579A0A1B0GRJ4 243 aa5.31□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 Krtap5-5Q2TA51 241 aa5.31□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 Krtap5-4Q62220 223 aa5.31□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 Mt3P28184 68 aa5.31□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 Sprr2hO70559 108 aa5.3□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 A030005L19RikA0A1Y7VIU2 113 aa5.3□□□□□ -1.56
Sqstm1-202ENSMUST00000102774 Eppk1Q8R0W0 6548 aa5.15□□□□□ -1.59
Sqstm1-202ENSMUST00000102774 A0A1Y7VLE6 161 aa5.14□□□□□ -1.59
Sqstm1-202ENSMUST00000102774 Gm39115A0A1B0GSH7 232 aa5.05□□□□□ -1.6
Sqstm1-202ENSMUST00000102774 Sprr2eO70556 76 aa4.92□□□□□ -1.62
Sqstm1-202ENSMUST00000102774 Muc19Q6PZE0 7524 aa4.91□□□□□ -1.62
Sqstm1-202ENSMUST00000102774 DstQ91ZU6 7393 aaKnown RBP4.89□□□□□ -1.63
Sqstm1-202ENSMUST00000102774 Gm11639A0A1D5RLM8 5808 aa4.84□□□□□ -1.63
Sqstm1-202ENSMUST00000102774 Krtap31-2Q8CAY5 177 aa4.82□□□□□ -1.64
Sqstm1-202ENSMUST00000102774 Krtap28-10A0A1Y7VP58 119 aa4.8□□□□□ -1.64
Sqstm1-202ENSMUST00000102774 Krtap31-1Q9D644 177 aa4.72□□□□□ -1.65
Sqstm1-202ENSMUST00000102774 Gm10024A0A0A0MQA4 119 aa4.69□□□□□ -1.66
Sqstm1-202ENSMUST00000102774 Sprr2fO70557 76 aa4.66□□□□□ -1.66
Sqstm1-202ENSMUST00000102774 Gm7544A0A1Y7VJ58 118 aa4.61□□□□□ -1.67
Sqstm1-202ENSMUST00000102774 AhnakE9Q616 5656 aaKnown RBP4.58□□□□□ -1.68
Sqstm1-202ENSMUST00000102774 Gm45618A0A1B0GSA0 219 aa4.51□□□□□ -1.69
Sqstm1-202ENSMUST00000102774 NebE9Q1W3 7152 aa4.5□□□□□ -1.69
Sqstm1-202ENSMUST00000102774 Gpr98Q8VHN7 6298 aaKnown RBP4.49□□□□□ -1.69
Sqstm1-202ENSMUST00000102774 Krtap4-16Q91W93 202 aa4.46□□□□□ -1.69
Sqstm1-202ENSMUST00000102774 Krtap28-13A0A087WQP5 138 aa4.43□□□□□ -1.7
Sqstm1-202ENSMUST00000102774 A030005K14RikA0A1Y7VNY1 122 aa4.43□□□□□ -1.7
Sqstm1-202ENSMUST00000102774 1110025L11RikO09048 78 aa4.36□□□□□ -1.71
Sqstm1-202ENSMUST00000102774 Krtap6-5Q925H3 78 aa4.36□□□□□ -1.71
Sqstm1-202ENSMUST00000102774 Muc16A0A140LJ72 8478 aa4.22□□□□□ -1.73
Sqstm1-202ENSMUST00000102774 A0A1Y7VJ07 166 aa4.21□□□□□ -1.74
Sqstm1-202ENSMUST00000102774 A0A286YCP9 139 aa4.05□□□□□ -1.76
Sqstm1-202ENSMUST00000102774 A030003K21RikA0A1Y7VIM3 128 aa3.99□□□□□ -1.77
Sqstm1-202ENSMUST00000102774 Gm6217A0A1Y7VJK9 128 aa3.99□□□□□ -1.77
Sqstm1-202ENSMUST00000102774 Gm29735A0A1B0GT06 219 aa3.97□□□□□ -1.77
Sqstm1-202ENSMUST00000102774 Gm10229O08631 77 aa3.88□□□□□ -1.79
Sqstm1-202ENSMUST00000102774 Gm11567Q9D141 195 aa3.88□□□□□ -1.79
Sqstm1-202ENSMUST00000102774 Sprr2bO70554 98 aa3.7□□□□□ -1.82
Sqstm1-202ENSMUST00000102774 Krtap21-1Q925H4 128 aa3.55□□□□□ -1.84
Sqstm1-202ENSMUST00000102774 A030014E15RikA0A1Y7VJV2 120 aa3.49□□□□□ -1.85
Sqstm1-202ENSMUST00000102774 Krtap6-2O08884 159 aa3.36□□□□□ -1.87
Sqstm1-202ENSMUST00000102774 Phgr1Q8K0G7 91 aa3.16□□□□□ -1.9
Sqstm1-202ENSMUST00000102774 Krtap5-1Q64507 230 aa2.69□□□□□ -1.98
Sqstm1-202ENSMUST00000102774 Gm4559A4IF42 199 aa2.29□□□□□ -2.04
Retrieved 80 of 22,080 RNA–protein pairs in 10.4 ms