RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Lce1a1Q9CQH5 143 aa7.71□□□□□ -1.17
Scn1b-201ENSMUST00000098548 A0A1Y7VJH8 109 aa7.7□□□□□ -1.18
Scn1b-201ENSMUST00000098548 Syne1Q6ZWR6 8799 aa7.67□□□□□ -1.18
Scn1b-201ENSMUST00000098548 Krtap20-2E9Q0A8 60 aa7.65□□□□□ -1.18
Scn1b-201ENSMUST00000098548 Lce3bQ9CQM7 98 aa7.6□□□□□ -1.19
Scn1b-201ENSMUST00000098548 Gm11938Q9D3H4 131 aa7.58□□□□□ -1.2
Scn1b-201ENSMUST00000098548 Lce1kJ3QP15 125 aa7.57□□□□□ -1.2
Scn1b-201ENSMUST00000098548 Sprr2iO70560 76 aa7.55□□□□□ -1.2
Scn1b-201ENSMUST00000098548 Sprr2dO70555 85 aa7.49□□□□□ -1.21
Scn1b-201ENSMUST00000098548 Krtap5-2Q9D5Z7 189 aa7.48□□□□□ -1.21
Scn1b-201ENSMUST00000098548 4933428G20RikQ9D3X4 101 aa7.4□□□□□ -1.22
Scn1b-201ENSMUST00000098548 Lce1eQ9D139 143 aa7.37□□□□□ -1.23
Scn1b-201ENSMUST00000098548 Gm11568A2A4M2 211 aa7.33□□□□□ -1.24
Scn1b-201ENSMUST00000098548 Krtap9-1Q64526 186 aa7.33□□□□□ -1.24
Scn1b-201ENSMUST00000098548 Krtap19-4Q925H7 84 aa7.24□□□□□ -1.25
Scn1b-201ENSMUST00000098548 Lce1fB9EJP6 147 aa7.2□□□□□ -1.26
Scn1b-201ENSMUST00000098548 Lce1cQ9D1C5 147 aa7.2□□□□□ -1.26
Scn1b-201ENSMUST00000098548 Gm11559Q9D3H7 191 aa7.2□□□□□ -1.26
Scn1b-201ENSMUST00000098548 Gm9112A2AI92 75 aa7.07□□□□□ -1.28
Scn1b-201ENSMUST00000098548 Gm4553A0A1B0GSA9 284 aa7.06□□□□□ -1.28
Scn1b-201ENSMUST00000098548 Gm11554B1AQB2 190 aa7.05□□□□□ -1.28
Scn1b-201ENSMUST00000098548 Mt1P02802 61 aaKnown RBP7.01□□□□□ -1.29
Scn1b-201ENSMUST00000098548 Macf1Q9QXZ0 7354 aaKnown RBP6.95□□□□□ -1.3
Scn1b-201ENSMUST00000098548 Lce3cQ91V05 98 aa6.95□□□□□ -1.3
Scn1b-201ENSMUST00000098548 Eppk1Q8R0W0 6548 aa6.9□□□□□ -1.3
Scn1b-201ENSMUST00000098548 Gm2431E9Q8S1 172 aa6.88□□□□□ -1.31
Scn1b-201ENSMUST00000098548 A030005L19RikA0A1Y7VIU2 113 aa6.86□□□□□ -1.31
Scn1b-201ENSMUST00000098548 Gm45337A0A1B0GS71 263 aa6.85□□□□□ -1.31
Scn1b-201ENSMUST00000098548 Lce3dE9Q8V1 98 aa6.85□□□□□ -1.31
Scn1b-201ENSMUST00000098548 Kmt2dQ6PDK2 5588 aa6.85□□□□□ -1.31
Scn1b-201ENSMUST00000098548 Gm10153A0A1B0GRL1 320 aa6.83□□□□□ -1.32
Scn1b-201ENSMUST00000098548 Gm10100J3QK64 120 aa6.83□□□□□ -1.32
Scn1b-201ENSMUST00000098548 Lce3eF8VQJ0 98 aa6.82□□□□□ -1.32
Scn1b-201ENSMUST00000098548 Lce3fQ6PAI4 98 aa6.82□□□□□ -1.32
Scn1b-201ENSMUST00000098548 Gm10142J3KMP7 120 aa6.68□□□□□ -1.34
Scn1b-201ENSMUST00000098548 ObscnA2AAJ9 8891 aaKnown RBP6.65□□□□□ -1.35
Scn1b-201ENSMUST00000098548 Hmcn1D3YXG0 5634 aa6.63□□□□□ -1.35
Scn1b-201ENSMUST00000098548 Gm40460A0A1B0GR10 244 aa6.61□□□□□ -1.35
Scn1b-201ENSMUST00000098548 Gm7579A0A1B0GRJ4 243 aa6.61□□□□□ -1.35
Scn1b-201ENSMUST00000098548 Krtap5-5Q2TA51 241 aa6.61□□□□□ -1.35
Scn1b-201ENSMUST00000098548 Krtap5-4Q62220 223 aa6.61□□□□□ -1.35
Scn1b-201ENSMUST00000098548 Lce3aQ497I5 98 aa6.54□□□□□ -1.36
Scn1b-201ENSMUST00000098548 Sprr2hO70559 108 aa6.45□□□□□ -1.38
Scn1b-201ENSMUST00000098548 Gm11639A0A1D5RLM8 5808 aa6.45□□□□□ -1.38
Scn1b-201ENSMUST00000098548 Mt3P28184 68 aa6.4□□□□□ -1.39
Scn1b-201ENSMUST00000098548 Gm39115A0A1B0GSH7 232 aa6.38□□□□□ -1.39
Scn1b-201ENSMUST00000098548 Muc19Q6PZE0 7524 aa6.33□□□□□ -1.4
Scn1b-201ENSMUST00000098548 Sprr2eO70556 76 aa6.2□□□□□ -1.42
Scn1b-201ENSMUST00000098548 A0A1Y7VLE6 161 aa6.18□□□□□ -1.42
Scn1b-201ENSMUST00000098548 DstQ91ZU6 7393 aaKnown RBP6.17□□□□□ -1.42
Scn1b-201ENSMUST00000098548 Gpr98Q8VHN7 6298 aaKnown RBP6.09□□□□□ -1.43
Scn1b-201ENSMUST00000098548 Sprr2fO70557 76 aa5.89□□□□□ -1.47
Scn1b-201ENSMUST00000098548 AhnakE9Q616 5656 aaKnown RBP5.84□□□□□ -1.48
Scn1b-201ENSMUST00000098548 Krtap4-16Q91W93 202 aa5.83□□□□□ -1.48
Scn1b-201ENSMUST00000098548 NebE9Q1W3 7152 aa5.82□□□□□ -1.48
Scn1b-201ENSMUST00000098548 Gm45618A0A1B0GSA0 219 aa5.8□□□□□ -1.48
Scn1b-201ENSMUST00000098548 Krtap31-1Q9D644 177 aa5.69□□□□□ -1.5
Scn1b-201ENSMUST00000098548 Gm10024A0A0A0MQA4 119 aa5.66□□□□□ -1.5
Scn1b-201ENSMUST00000098548 A0A1Y7VJ07 166 aa5.16□□□□□ -1.58
Scn1b-201ENSMUST00000098548 1110025L11RikO09048 78 aa5.12□□□□□ -1.59
Scn1b-201ENSMUST00000098548 Krtap6-5Q925H3 78 aa5.12□□□□□ -1.59
Scn1b-201ENSMUST00000098548 Muc16A0A140LJ72 8478 aa4.94□□□□□ -1.62
Scn1b-201ENSMUST00000098548 Gm29735A0A1B0GT06 219 aa4.89□□□□□ -1.63
Scn1b-201ENSMUST00000098548 Gm11567Q9D141 195 aa4.75□□□□□ -1.65
Scn1b-201ENSMUST00000098548 Sprr2bO70554 98 aa4.7□□□□□ -1.66
Scn1b-201ENSMUST00000098548 Gm10229O08631 77 aa4.57□□□□□ -1.68
Scn1b-201ENSMUST00000098548 Krtap21-1Q925H4 128 aa4.16□□□□□ -1.74
Scn1b-201ENSMUST00000098548 Krtap6-2O08884 159 aa4.01□□□□□ -1.77
Scn1b-201ENSMUST00000098548 Krtap31-2Q8CAY5 177 aa3.91□□□□□ -1.78
Scn1b-201ENSMUST00000098548 Phgr1Q8K0G7 91 aa3.83□□□□□ -1.8
Scn1b-201ENSMUST00000098548 A030003K21RikA0A1Y7VIM3 128 aa3.72□□□□□ -1.81
Scn1b-201ENSMUST00000098548 A0A286YCP9 139 aa3.72□□□□□ -1.81
Scn1b-201ENSMUST00000098548 Krtap28-13A0A087WQP5 138 aa3.61□□□□□ -1.83
Scn1b-201ENSMUST00000098548 A030005K14RikA0A1Y7VNY1 122 aa3.59□□□□□ -1.84
Scn1b-201ENSMUST00000098548 Krtap28-10A0A1Y7VP58 119 aa3.59□□□□□ -1.84
Scn1b-201ENSMUST00000098548 Krtap5-1Q64507 230 aa3.55□□□□□ -1.84
Scn1b-201ENSMUST00000098548 Gm7544A0A1Y7VJ58 118 aa3.24□□□□□ -1.89
Scn1b-201ENSMUST00000098548 A030014E15RikA0A1Y7VJV2 120 aa3.21□□□□□ -1.9
Scn1b-201ENSMUST00000098548 Gm4559A4IF42 199 aa2.85□□□□□ -1.95
Scn1b-201ENSMUST00000098548 Gm6217A0A1Y7VJK9 128 aa2.77□□□□□ -1.97
Retrieved 80 of 22,080 RNA–protein pairs in 9.4 ms