RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Lce1a1Q9CQH5 143 aa7,71□□□□□ -1,17
Scn1b-201ENSMUST00000098548 A0A1Y7VJH8 109 aa7,7□□□□□ -1,18
Scn1b-201ENSMUST00000098548 Syne1Q6ZWR6 8799 aa7,67□□□□□ -1,18
Scn1b-201ENSMUST00000098548 Krtap20-2E9Q0A8 60 aa7,65□□□□□ -1,18
Scn1b-201ENSMUST00000098548 Lce3bQ9CQM7 98 aa7,6□□□□□ -1,19
Scn1b-201ENSMUST00000098548 Gm11938Q9D3H4 131 aa7,58□□□□□ -1,2
Scn1b-201ENSMUST00000098548 Lce1kJ3QP15 125 aa7,57□□□□□ -1,2
Scn1b-201ENSMUST00000098548 Sprr2iO70560 76 aa7,55□□□□□ -1,2
Scn1b-201ENSMUST00000098548 Sprr2dO70555 85 aa7,49□□□□□ -1,21
Scn1b-201ENSMUST00000098548 Krtap5-2Q9D5Z7 189 aa7,48□□□□□ -1,21
Scn1b-201ENSMUST00000098548 4933428G20RikQ9D3X4 101 aa7,4□□□□□ -1,22
Scn1b-201ENSMUST00000098548 Lce1eQ9D139 143 aa7,37□□□□□ -1,23
Scn1b-201ENSMUST00000098548 Gm11568A2A4M2 211 aa7,33□□□□□ -1,24
Scn1b-201ENSMUST00000098548 Krtap9-1Q64526 186 aa7,33□□□□□ -1,24
Scn1b-201ENSMUST00000098548 Krtap19-4Q925H7 84 aa7,24□□□□□ -1,25
Scn1b-201ENSMUST00000098548 Lce1fB9EJP6 147 aa7,2□□□□□ -1,26
Scn1b-201ENSMUST00000098548 Lce1cQ9D1C5 147 aa7,2□□□□□ -1,26
Scn1b-201ENSMUST00000098548 Gm11559Q9D3H7 191 aa7,2□□□□□ -1,26
Scn1b-201ENSMUST00000098548 Gm9112A2AI92 75 aa7,07□□□□□ -1,28
Scn1b-201ENSMUST00000098548 Gm4553A0A1B0GSA9 284 aa7,06□□□□□ -1,28
Scn1b-201ENSMUST00000098548 Gm11554B1AQB2 190 aa7,05□□□□□ -1,28
Scn1b-201ENSMUST00000098548 Mt1P02802 61 aaKnown RBP7,01□□□□□ -1,29
Scn1b-201ENSMUST00000098548 Macf1Q9QXZ0 7354 aaKnown RBP6,95□□□□□ -1,3
Scn1b-201ENSMUST00000098548 Lce3cQ91V05 98 aa6,95□□□□□ -1,3
Scn1b-201ENSMUST00000098548 Eppk1Q8R0W0 6548 aa6,9□□□□□ -1,3
Scn1b-201ENSMUST00000098548 Gm2431E9Q8S1 172 aa6,88□□□□□ -1,31
Scn1b-201ENSMUST00000098548 A030005L19RikA0A1Y7VIU2 113 aa6,86□□□□□ -1,31
Scn1b-201ENSMUST00000098548 Gm45337A0A1B0GS71 263 aa6,85□□□□□ -1,31
Scn1b-201ENSMUST00000098548 Lce3dE9Q8V1 98 aa6,85□□□□□ -1,31
Scn1b-201ENSMUST00000098548 Kmt2dQ6PDK2 5588 aa6,85□□□□□ -1,31
Scn1b-201ENSMUST00000098548 Gm10153A0A1B0GRL1 320 aa6,83□□□□□ -1,32
Scn1b-201ENSMUST00000098548 Gm10100J3QK64 120 aa6,83□□□□□ -1,32
Scn1b-201ENSMUST00000098548 Lce3eF8VQJ0 98 aa6,82□□□□□ -1,32
Scn1b-201ENSMUST00000098548 Lce3fQ6PAI4 98 aa6,82□□□□□ -1,32
Scn1b-201ENSMUST00000098548 Gm10142J3KMP7 120 aa6,68□□□□□ -1,34
Scn1b-201ENSMUST00000098548 ObscnA2AAJ9 8891 aaKnown RBP6,65□□□□□ -1,35
Scn1b-201ENSMUST00000098548 Hmcn1D3YXG0 5634 aa6,63□□□□□ -1,35
Scn1b-201ENSMUST00000098548 Gm40460A0A1B0GR10 244 aa6,61□□□□□ -1,35
Scn1b-201ENSMUST00000098548 Gm7579A0A1B0GRJ4 243 aa6,61□□□□□ -1,35
Scn1b-201ENSMUST00000098548 Krtap5-5Q2TA51 241 aa6,61□□□□□ -1,35
Scn1b-201ENSMUST00000098548 Krtap5-4Q62220 223 aa6,61□□□□□ -1,35
Scn1b-201ENSMUST00000098548 Lce3aQ497I5 98 aa6,54□□□□□ -1,36
Scn1b-201ENSMUST00000098548 Sprr2hO70559 108 aa6,45□□□□□ -1,38
Scn1b-201ENSMUST00000098548 Gm11639A0A1D5RLM8 5808 aa6,45□□□□□ -1,38
Scn1b-201ENSMUST00000098548 Mt3P28184 68 aa6,4□□□□□ -1,39
Scn1b-201ENSMUST00000098548 Gm39115A0A1B0GSH7 232 aa6,38□□□□□ -1,39
Scn1b-201ENSMUST00000098548 Muc19Q6PZE0 7524 aa6,33□□□□□ -1,4
Scn1b-201ENSMUST00000098548 Sprr2eO70556 76 aa6,2□□□□□ -1,42
Scn1b-201ENSMUST00000098548 A0A1Y7VLE6 161 aa6,18□□□□□ -1,42
Scn1b-201ENSMUST00000098548 DstQ91ZU6 7393 aaKnown RBP6,17□□□□□ -1,42
Scn1b-201ENSMUST00000098548 Gpr98Q8VHN7 6298 aaKnown RBP6,09□□□□□ -1,43
Scn1b-201ENSMUST00000098548 Sprr2fO70557 76 aa5,89□□□□□ -1,47
Scn1b-201ENSMUST00000098548 AhnakE9Q616 5656 aaKnown RBP5,84□□□□□ -1,48
Scn1b-201ENSMUST00000098548 Krtap4-16Q91W93 202 aa5,83□□□□□ -1,48
Scn1b-201ENSMUST00000098548 NebE9Q1W3 7152 aa5,82□□□□□ -1,48
Scn1b-201ENSMUST00000098548 Gm45618A0A1B0GSA0 219 aa5,8□□□□□ -1,48
Scn1b-201ENSMUST00000098548 Krtap31-1Q9D644 177 aa5,69□□□□□ -1,5
Scn1b-201ENSMUST00000098548 Gm10024A0A0A0MQA4 119 aa5,66□□□□□ -1,5
Scn1b-201ENSMUST00000098548 A0A1Y7VJ07 166 aa5,16□□□□□ -1,58
Scn1b-201ENSMUST00000098548 1110025L11RikO09048 78 aa5,12□□□□□ -1,59
Scn1b-201ENSMUST00000098548 Krtap6-5Q925H3 78 aa5,12□□□□□ -1,59
Scn1b-201ENSMUST00000098548 Muc16A0A140LJ72 8478 aa4,94□□□□□ -1,62
Scn1b-201ENSMUST00000098548 Gm29735A0A1B0GT06 219 aa4,89□□□□□ -1,63
Scn1b-201ENSMUST00000098548 Gm11567Q9D141 195 aa4,75□□□□□ -1,65
Scn1b-201ENSMUST00000098548 Sprr2bO70554 98 aa4,7□□□□□ -1,66
Scn1b-201ENSMUST00000098548 Gm10229O08631 77 aa4,57□□□□□ -1,68
Scn1b-201ENSMUST00000098548 Krtap21-1Q925H4 128 aa4,16□□□□□ -1,74
Scn1b-201ENSMUST00000098548 Krtap6-2O08884 159 aa4,01□□□□□ -1,77
Scn1b-201ENSMUST00000098548 Krtap31-2Q8CAY5 177 aa3,91□□□□□ -1,78
Scn1b-201ENSMUST00000098548 Phgr1Q8K0G7 91 aa3,83□□□□□ -1,8
Scn1b-201ENSMUST00000098548 A030003K21RikA0A1Y7VIM3 128 aa3,72□□□□□ -1,81
Scn1b-201ENSMUST00000098548 A0A286YCP9 139 aa3,72□□□□□ -1,81
Scn1b-201ENSMUST00000098548 Krtap28-13A0A087WQP5 138 aa3,61□□□□□ -1,83
Scn1b-201ENSMUST00000098548 A030005K14RikA0A1Y7VNY1 122 aa3,59□□□□□ -1,84
Scn1b-201ENSMUST00000098548 Krtap28-10A0A1Y7VP58 119 aa3,59□□□□□ -1,84
Scn1b-201ENSMUST00000098548 Krtap5-1Q64507 230 aa3,55□□□□□ -1,84
Scn1b-201ENSMUST00000098548 Gm7544A0A1Y7VJ58 118 aa3,24□□□□□ -1,89
Scn1b-201ENSMUST00000098548 A030014E15RikA0A1Y7VJV2 120 aa3,21□□□□□ -1,9
Scn1b-201ENSMUST00000098548 Gm4559A4IF42 199 aa2,85□□□□□ -1,95
Scn1b-201ENSMUST00000098548 Gm6217A0A1Y7VJK9 128 aa2,77□□□□□ -1,97
Retrieved 80 of 22,080 RNA–protein pairs in 44,8 ms