RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Krtap31-1Q9D644 177 aa5,71□□□□□ -1,5
Upf1-201ENSMUST00000075666 Lce1bQ9D149 137 aa5,67□□□□□ -1,5
Upf1-201ENSMUST00000075666 Sprr2hO70559 108 aa5,66□□□□□ -1,5
Upf1-201ENSMUST00000075666 Krtap4-2B1AQ85 167 aa5,59□□□□□ -1,51
Upf1-201ENSMUST00000075666 Muc16A0A140LJ72 8478 aa5,56□□□□□ -1,52
Upf1-201ENSMUST00000075666 Krtap4-6Q3V4B7 195 aa5,5□□□□□ -1,53
Upf1-201ENSMUST00000075666 Muc5bE9Q5I3 4800 aa5,5□□□□□ -1,53
Upf1-201ENSMUST00000075666 Sprr2eO70556 76 aa5,46□□□□□ -1,54
Upf1-201ENSMUST00000075666 Mt4P47945 62 aa5,45□□□□□ -1,54
Upf1-201ENSMUST00000075666 Lce1a1Q9CQH5 143 aa5,41□□□□□ -1,54
Upf1-201ENSMUST00000075666 Krtap4-16Q91W93 202 aa5,4□□□□□ -1,54
Upf1-201ENSMUST00000075666 Krtap4-1Q3UUY3 169 aa5,28□□□□□ -1,56
Upf1-201ENSMUST00000075666 SspoQ8CG65 4998 aa5,26□□□□□ -1,57
Upf1-201ENSMUST00000075666 Gm11596B1AQB0 205 aa5,24□□□□□ -1,57
Upf1-201ENSMUST00000075666 Fsip2A2ARZ3 6995 aa5,18□□□□□ -1,58
Upf1-201ENSMUST00000075666 Gm11564A2A4L9 201 aa5,17□□□□□ -1,58
Upf1-201ENSMUST00000075666 Gm11563B1AQ90 168 aa5,17□□□□□ -1,58
Upf1-201ENSMUST00000075666 Gm11595B1AQA7 289 aa5,17□□□□□ -1,58
Upf1-201ENSMUST00000075666 Krtap4-8B1AQA8 209 aa5,17□□□□□ -1,58
Upf1-201ENSMUST00000075666 Krtap4-9B1AQA9 244 aa5,16□□□□□ -1,58
Upf1-201ENSMUST00000075666 ObscnA2AAJ9 8891 aaKnown RBP5,14□□□□□ -1,59
Upf1-201ENSMUST00000075666 Krtap31-2Q8CAY5 177 aa5,14□□□□□ -1,59
Upf1-201ENSMUST00000075666 Lce1kJ3QP15 125 aa5,06□□□□□ -1,6
Upf1-201ENSMUST00000075666 2300003K06RikA2A4M0 262 aa5,05□□□□□ -1,6
Upf1-201ENSMUST00000075666 Krtap4-13Q9D7P3 165 aa5□□□□□ -1,61
Upf1-201ENSMUST00000075666 Krtap4-7Q9D732 168 aa4,99□□□□□ -1,61
Upf1-201ENSMUST00000075666 Syne2Q6ZWQ0 6874 aaKnown RBP4,97□□□□□ -1,61
Upf1-201ENSMUST00000075666 Mt1P02802 61 aaKnown RBP4,83□□□□□ -1,64
Upf1-201ENSMUST00000075666 Mt3P28184 68 aa4,78□□□□□ -1,64
Upf1-201ENSMUST00000075666 Macf1Q9QXZ0 7354 aaKnown RBP4,63□□□□□ -1,67
Upf1-201ENSMUST00000075666 Krtap6-3A0A087WQL6 57 aa4,62□□□□□ -1,67
Upf1-201ENSMUST00000075666 Gm11555B1AQ89 175 aa4,6□□□□□ -1,67
Upf1-201ENSMUST00000075666 Gm11554B1AQB2 190 aa4,42□□□□□ -1,7
Upf1-201ENSMUST00000075666 Krtap20-2E9Q0A8 60 aa4,42□□□□□ -1,7
Upf1-201ENSMUST00000075666 DstQ91ZU6 7393 aaKnown RBP4,28□□□□□ -1,72
Upf1-201ENSMUST00000075666 Sprr2bO70554 98 aa4,19□□□□□ -1,74
Upf1-201ENSMUST00000075666 Muc19Q6PZE0 7524 aa4,17□□□□□ -1,74
Upf1-201ENSMUST00000075666 NebE9Q1W3 7152 aa4,14□□□□□ -1,75
Upf1-201ENSMUST00000075666 Eppk1Q8R0W0 6548 aa4,12□□□□□ -1,75
Upf1-201ENSMUST00000075666 Kmt2dQ6PDK2 5588 aa4,05□□□□□ -1,76
Upf1-201ENSMUST00000075666 1110025L11RikO09048 78 aa3,95□□□□□ -1,78
Upf1-201ENSMUST00000075666 Krtap6-5Q925H3 78 aa3,95□□□□□ -1,78
Upf1-201ENSMUST00000075666 Gm11568A2A4M2 211 aa3,92□□□□□ -1,78
Upf1-201ENSMUST00000075666 Krtap9-1Q64526 186 aa3,92□□□□□ -1,78
Upf1-201ENSMUST00000075666 Gpr98Q8VHN7 6298 aaKnown RBP3,65□□□□□ -1,83
Upf1-201ENSMUST00000075666 Gm11559Q9D3H7 191 aa3,64□□□□□ -1,83
Upf1-201ENSMUST00000075666 Krtap5-2Q9D5Z7 189 aa3,63□□□□□ -1,83
Upf1-201ENSMUST00000075666 Gm10229O08631 77 aa3,62□□□□□ -1,83
Upf1-201ENSMUST00000075666 Hmcn1D3YXG0 5634 aa3,58□□□□□ -1,84
Upf1-201ENSMUST00000075666 Gm11639A0A1D5RLM8 5808 aa3,57□□□□□ -1,84
Upf1-201ENSMUST00000075666 Phgr1Q8K0G7 91 aa3,56□□□□□ -1,84
Upf1-201ENSMUST00000075666 Gm4553A0A1B0GSA9 284 aa3,39□□□□□ -1,87
Upf1-201ENSMUST00000075666 A0A1Y7VJH8 109 aa3,35□□□□□ -1,87
Upf1-201ENSMUST00000075666 Gm10153A0A1B0GRL1 320 aa3,29□□□□□ -1,88
Upf1-201ENSMUST00000075666 Gm2431E9Q8S1 172 aa3,25□□□□□ -1,89
Upf1-201ENSMUST00000075666 Gm45337A0A1B0GS71 263 aa3,16□□□□□ -1,9
Upf1-201ENSMUST00000075666 A030005L19RikA0A1Y7VIU2 113 aa3,1□□□□□ -1,91
Upf1-201ENSMUST00000075666 Gm40460A0A1B0GR10 244 aa3,08□□□□□ -1,92
Upf1-201ENSMUST00000075666 Gm7579A0A1B0GRJ4 243 aa3,08□□□□□ -1,92
Upf1-201ENSMUST00000075666 Krtap5-5Q2TA51 241 aa3,08□□□□□ -1,92
Upf1-201ENSMUST00000075666 Krtap5-4Q62220 223 aa3,08□□□□□ -1,92
Upf1-201ENSMUST00000075666 Krtap21-1Q925H4 128 aa2,99□□□□□ -1,93
Upf1-201ENSMUST00000075666 AhnakE9Q616 5656 aaKnown RBP2,97□□□□□ -1,93
Upf1-201ENSMUST00000075666 Krtap6-2O08884 159 aa2,94□□□□□ -1,94
Upf1-201ENSMUST00000075666 Gm39115A0A1B0GSH7 232 aa2,88□□□□□ -1,95
Upf1-201ENSMUST00000075666 A0A1Y7VLE6 161 aa2,82□□□□□ -1,96
Upf1-201ENSMUST00000075666 Gm11567Q9D141 195 aa2,63□□□□□ -1,99
Upf1-201ENSMUST00000075666 Gm45618A0A1B0GSA0 219 aa2,5□□□□□ -2,01
Upf1-201ENSMUST00000075666 Gm29735A0A1B0GT06 219 aa2,31□□□□□ -2,04
Upf1-201ENSMUST00000075666 A0A1Y7VJ07 166 aa2,08□□□□□ -2,08
Upf1-201ENSMUST00000075666 A0A286YCP9 139 aa2□□□□□ -2,09
Upf1-201ENSMUST00000075666 Krtap28-13A0A087WQP5 138 aa1,96□□□□□ -2,1
Upf1-201ENSMUST00000075666 A030005K14RikA0A1Y7VNY1 122 aa1,79□□□□□ -2,12
Upf1-201ENSMUST00000075666 A030014E15RikA0A1Y7VJV2 120 aa1,69□□□□□ -2,14
Upf1-201ENSMUST00000075666 Krtap28-10A0A1Y7VP58 119 aa1,66□□□□□ -2,14
Upf1-201ENSMUST00000075666 Krtap5-1Q64507 230 aa1,65□□□□□ -2,15
Upf1-201ENSMUST00000075666 Gm7544A0A1Y7VJ58 118 aa1,59□□□□□ -2,15
Upf1-201ENSMUST00000075666 A030003K21RikA0A1Y7VIM3 128 aa1,29□□□□□ -2,2
Upf1-201ENSMUST00000075666 Gm4559A4IF42 199 aa1,27□□□□□ -2,21
Upf1-201ENSMUST00000075666 Gm6217A0A1Y7VJK9 128 aa1,14□□□□□ -2,23
Retrieved 80 of 22,080 RNA–protein pairs in 51,2 ms