RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Krtap31-1Q9D644 177 aa5.71□□□□□ -1.5
Upf1-201ENSMUST00000075666 Lce1bQ9D149 137 aa5.67□□□□□ -1.5
Upf1-201ENSMUST00000075666 Sprr2hO70559 108 aa5.66□□□□□ -1.5
Upf1-201ENSMUST00000075666 Krtap4-2B1AQ85 167 aa5.59□□□□□ -1.51
Upf1-201ENSMUST00000075666 Muc16A0A140LJ72 8478 aa5.56□□□□□ -1.52
Upf1-201ENSMUST00000075666 Krtap4-6Q3V4B7 195 aa5.5□□□□□ -1.53
Upf1-201ENSMUST00000075666 Muc5bE9Q5I3 4800 aa5.5□□□□□ -1.53
Upf1-201ENSMUST00000075666 Sprr2eO70556 76 aa5.46□□□□□ -1.54
Upf1-201ENSMUST00000075666 Mt4P47945 62 aa5.45□□□□□ -1.54
Upf1-201ENSMUST00000075666 Lce1a1Q9CQH5 143 aa5.41□□□□□ -1.54
Upf1-201ENSMUST00000075666 Krtap4-16Q91W93 202 aa5.4□□□□□ -1.54
Upf1-201ENSMUST00000075666 Krtap4-1Q3UUY3 169 aa5.28□□□□□ -1.56
Upf1-201ENSMUST00000075666 SspoQ8CG65 4998 aa5.26□□□□□ -1.57
Upf1-201ENSMUST00000075666 Gm11596B1AQB0 205 aa5.24□□□□□ -1.57
Upf1-201ENSMUST00000075666 Fsip2A2ARZ3 6995 aa5.18□□□□□ -1.58
Upf1-201ENSMUST00000075666 Gm11564A2A4L9 201 aa5.17□□□□□ -1.58
Upf1-201ENSMUST00000075666 Gm11563B1AQ90 168 aa5.17□□□□□ -1.58
Upf1-201ENSMUST00000075666 Gm11595B1AQA7 289 aa5.17□□□□□ -1.58
Upf1-201ENSMUST00000075666 Krtap4-8B1AQA8 209 aa5.17□□□□□ -1.58
Upf1-201ENSMUST00000075666 Krtap4-9B1AQA9 244 aa5.16□□□□□ -1.58
Upf1-201ENSMUST00000075666 ObscnA2AAJ9 8891 aaKnown RBP5.14□□□□□ -1.59
Upf1-201ENSMUST00000075666 Krtap31-2Q8CAY5 177 aa5.14□□□□□ -1.59
Upf1-201ENSMUST00000075666 Lce1kJ3QP15 125 aa5.06□□□□□ -1.6
Upf1-201ENSMUST00000075666 2300003K06RikA2A4M0 262 aa5.05□□□□□ -1.6
Upf1-201ENSMUST00000075666 Krtap4-13Q9D7P3 165 aa5□□□□□ -1.61
Upf1-201ENSMUST00000075666 Krtap4-7Q9D732 168 aa4.99□□□□□ -1.61
Upf1-201ENSMUST00000075666 Syne2Q6ZWQ0 6874 aaKnown RBP4.97□□□□□ -1.61
Upf1-201ENSMUST00000075666 Mt1P02802 61 aaKnown RBP4.83□□□□□ -1.64
Upf1-201ENSMUST00000075666 Mt3P28184 68 aa4.78□□□□□ -1.64
Upf1-201ENSMUST00000075666 Macf1Q9QXZ0 7354 aaKnown RBP4.63□□□□□ -1.67
Upf1-201ENSMUST00000075666 Krtap6-3A0A087WQL6 57 aa4.62□□□□□ -1.67
Upf1-201ENSMUST00000075666 Gm11555B1AQ89 175 aa4.6□□□□□ -1.67
Upf1-201ENSMUST00000075666 Gm11554B1AQB2 190 aa4.42□□□□□ -1.7
Upf1-201ENSMUST00000075666 Krtap20-2E9Q0A8 60 aa4.42□□□□□ -1.7
Upf1-201ENSMUST00000075666 DstQ91ZU6 7393 aaKnown RBP4.28□□□□□ -1.72
Upf1-201ENSMUST00000075666 Sprr2bO70554 98 aa4.19□□□□□ -1.74
Upf1-201ENSMUST00000075666 Muc19Q6PZE0 7524 aa4.17□□□□□ -1.74
Upf1-201ENSMUST00000075666 NebE9Q1W3 7152 aa4.14□□□□□ -1.75
Upf1-201ENSMUST00000075666 Eppk1Q8R0W0 6548 aa4.12□□□□□ -1.75
Upf1-201ENSMUST00000075666 Kmt2dQ6PDK2 5588 aa4.05□□□□□ -1.76
Upf1-201ENSMUST00000075666 1110025L11RikO09048 78 aa3.95□□□□□ -1.78
Upf1-201ENSMUST00000075666 Krtap6-5Q925H3 78 aa3.95□□□□□ -1.78
Upf1-201ENSMUST00000075666 Gm11568A2A4M2 211 aa3.92□□□□□ -1.78
Upf1-201ENSMUST00000075666 Krtap9-1Q64526 186 aa3.92□□□□□ -1.78
Upf1-201ENSMUST00000075666 Gpr98Q8VHN7 6298 aaKnown RBP3.65□□□□□ -1.83
Upf1-201ENSMUST00000075666 Gm11559Q9D3H7 191 aa3.64□□□□□ -1.83
Upf1-201ENSMUST00000075666 Krtap5-2Q9D5Z7 189 aa3.63□□□□□ -1.83
Upf1-201ENSMUST00000075666 Gm10229O08631 77 aa3.62□□□□□ -1.83
Upf1-201ENSMUST00000075666 Hmcn1D3YXG0 5634 aa3.58□□□□□ -1.84
Upf1-201ENSMUST00000075666 Gm11639A0A1D5RLM8 5808 aa3.57□□□□□ -1.84
Upf1-201ENSMUST00000075666 Phgr1Q8K0G7 91 aa3.56□□□□□ -1.84
Upf1-201ENSMUST00000075666 Gm4553A0A1B0GSA9 284 aa3.39□□□□□ -1.87
Upf1-201ENSMUST00000075666 A0A1Y7VJH8 109 aa3.35□□□□□ -1.87
Upf1-201ENSMUST00000075666 Gm10153A0A1B0GRL1 320 aa3.29□□□□□ -1.88
Upf1-201ENSMUST00000075666 Gm2431E9Q8S1 172 aa3.25□□□□□ -1.89
Upf1-201ENSMUST00000075666 Gm45337A0A1B0GS71 263 aa3.16□□□□□ -1.9
Upf1-201ENSMUST00000075666 A030005L19RikA0A1Y7VIU2 113 aa3.1□□□□□ -1.91
Upf1-201ENSMUST00000075666 Gm40460A0A1B0GR10 244 aa3.08□□□□□ -1.92
Upf1-201ENSMUST00000075666 Gm7579A0A1B0GRJ4 243 aa3.08□□□□□ -1.92
Upf1-201ENSMUST00000075666 Krtap5-5Q2TA51 241 aa3.08□□□□□ -1.92
Upf1-201ENSMUST00000075666 Krtap5-4Q62220 223 aa3.08□□□□□ -1.92
Upf1-201ENSMUST00000075666 Krtap21-1Q925H4 128 aa2.99□□□□□ -1.93
Upf1-201ENSMUST00000075666 AhnakE9Q616 5656 aaKnown RBP2.97□□□□□ -1.93
Upf1-201ENSMUST00000075666 Krtap6-2O08884 159 aa2.94□□□□□ -1.94
Upf1-201ENSMUST00000075666 Gm39115A0A1B0GSH7 232 aa2.88□□□□□ -1.95
Upf1-201ENSMUST00000075666 A0A1Y7VLE6 161 aa2.82□□□□□ -1.96
Upf1-201ENSMUST00000075666 Gm11567Q9D141 195 aa2.63□□□□□ -1.99
Upf1-201ENSMUST00000075666 Gm45618A0A1B0GSA0 219 aa2.5□□□□□ -2.01
Upf1-201ENSMUST00000075666 Gm29735A0A1B0GT06 219 aa2.31□□□□□ -2.04
Upf1-201ENSMUST00000075666 A0A1Y7VJ07 166 aa2.08□□□□□ -2.08
Upf1-201ENSMUST00000075666 A0A286YCP9 139 aa2□□□□□ -2.09
Upf1-201ENSMUST00000075666 Krtap28-13A0A087WQP5 138 aa1.96□□□□□ -2.1
Upf1-201ENSMUST00000075666 A030005K14RikA0A1Y7VNY1 122 aa1.79□□□□□ -2.12
Upf1-201ENSMUST00000075666 A030014E15RikA0A1Y7VJV2 120 aa1.69□□□□□ -2.14
Upf1-201ENSMUST00000075666 Krtap28-10A0A1Y7VP58 119 aa1.66□□□□□ -2.14
Upf1-201ENSMUST00000075666 Krtap5-1Q64507 230 aa1.65□□□□□ -2.15
Upf1-201ENSMUST00000075666 Gm7544A0A1Y7VJ58 118 aa1.59□□□□□ -2.15
Upf1-201ENSMUST00000075666 A030003K21RikA0A1Y7VIM3 128 aa1.29□□□□□ -2.2
Upf1-201ENSMUST00000075666 Gm4559A4IF42 199 aa1.27□□□□□ -2.21
Upf1-201ENSMUST00000075666 Gm6217A0A1Y7VJK9 128 aa1.14□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 60.4 ms