RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 Gm3880A0A1B0GSB3 72 aa4.64□□□□□ -1.67
Clrn1-203ENSMUST00000072551 Gm10100J3QK64 120 aa4.62□□□□□ -1.67
Clrn1-203ENSMUST00000072551 Krtap4-9B1AQA9 244 aa4.57□□□□□ -1.68
Clrn1-203ENSMUST00000072551 Krtap8-1O08633 61 aa4.57□□□□□ -1.68
Clrn1-203ENSMUST00000072551 Mt4P47945 62 aa4.52□□□□□ -1.69
Clrn1-203ENSMUST00000072551 Krtap22-2J3QNX6 67 aa4.49□□□□□ -1.69
Clrn1-203ENSMUST00000072551 Krtap9-3Q3V2C1 136 aa4.49□□□□□ -1.69
Clrn1-203ENSMUST00000072551 Fsip2A2ARZ3 6995 aa4.45□□□□□ -1.7
Clrn1-203ENSMUST00000072551 Krtap19-9bQ99NG9 58 aa4.45□□□□□ -1.7
Clrn1-203ENSMUST00000072551 Krtap4-13Q9D7P3 165 aa4.41□□□□□ -1.7
Clrn1-203ENSMUST00000072551 Lce1kJ3QP15 125 aa4.34□□□□□ -1.71
Clrn1-203ENSMUST00000072551 2300003K06RikA2A4M0 262 aa4.27□□□□□ -1.73
Clrn1-203ENSMUST00000072551 Krtap6-3A0A087WQL6 57 aa4.26□□□□□ -1.73
Clrn1-203ENSMUST00000072551 Sprr2kO70562 68 aa4.24□□□□□ -1.73
Clrn1-203ENSMUST00000072551 Krtap7-1Q9D3I6 87 aa4.19□□□□□ -1.74
Clrn1-203ENSMUST00000072551 Gm40193A0A1B0GT39 78 aa4.15□□□□□ -1.75
Clrn1-203ENSMUST00000072551 Lce1cQ9D1C5 147 aa4.1□□□□□ -1.75
Clrn1-203ENSMUST00000072551 Lce1fB9EJP6 147 aa4.08□□□□□ -1.76
Clrn1-203ENSMUST00000072551 Gm10272F7CZ33 110 aa3.98□□□□□ -1.77
Clrn1-203ENSMUST00000072551 Syne1Q6ZWR6 8799 aa3.97□□□□□ -1.77
Clrn1-203ENSMUST00000072551 Gm10142J3KMP7 120 aa3.94□□□□□ -1.78
Clrn1-203ENSMUST00000072551 Krtap20-2E9Q0A8 60 aa3.92□□□□□ -1.78
Clrn1-203ENSMUST00000072551 Sprr2gO70558 76 aa3.92□□□□□ -1.78
Clrn1-203ENSMUST00000072551 Tnp1P10856 55 aa3.9□□□□□ -1.79
Clrn1-203ENSMUST00000072551 Lce3bQ9CQM7 98 aa3.85□□□□□ -1.79
Clrn1-203ENSMUST00000072551 Gm11567Q9D141 195 aa3.85□□□□□ -1.79
Clrn1-203ENSMUST00000072551 Krtap5-2Q9D5Z7 189 aa3.85□□□□□ -1.79
Clrn1-203ENSMUST00000072551 Gm45618A0A1B0GSA0 219 aa3.83□□□□□ -1.8
Clrn1-203ENSMUST00000072551 Gm2431E9Q8S1 172 aa3.82□□□□□ -1.8
Clrn1-203ENSMUST00000072551 Sprr2iO70560 76 aa3.81□□□□□ -1.8
Clrn1-203ENSMUST00000072551 Gm11568A2A4M2 211 aa3.78□□□□□ -1.81
Clrn1-203ENSMUST00000072551 Krtap9-1Q64526 186 aa3.78□□□□□ -1.81
Clrn1-203ENSMUST00000072551 2310046K23RikA0A0A6YVW6 87 aa3.75□□□□□ -1.81
Clrn1-203ENSMUST00000072551 Gm11554B1AQB2 190 aa3.71□□□□□ -1.82
Clrn1-203ENSMUST00000072551 Gm11938Q9D3H4 131 aa3.71□□□□□ -1.82
Clrn1-203ENSMUST00000072551 Gm4553A0A1B0GSA9 284 aa3.63□□□□□ -1.83
Clrn1-203ENSMUST00000072551 Macf1Q9QXZ0 7354 aaKnown RBP3.61□□□□□ -1.83
Clrn1-203ENSMUST00000072551 Gm39115A0A1B0GSH7 232 aa3.6□□□□□ -1.83
Clrn1-203ENSMUST00000072551 Mt3P28184 68 aa3.6□□□□□ -1.83
Clrn1-203ENSMUST00000072551 Mt1P02802 61 aaKnown RBP3.58□□□□□ -1.84
Clrn1-203ENSMUST00000072551 Gm10153A0A1B0GRL1 320 aa3.53□□□□□ -1.84
Clrn1-203ENSMUST00000072551 Gm45337A0A1B0GS71 263 aa3.52□□□□□ -1.85
Clrn1-203ENSMUST00000072551 Gm29735A0A1B0GT06 219 aa3.52□□□□□ -1.85
Clrn1-203ENSMUST00000072551 Kmt2dQ6PDK2 5588 aa3.52□□□□□ -1.85
Clrn1-203ENSMUST00000072551 Lce3cQ91V05 98 aa3.51□□□□□ -1.85
Clrn1-203ENSMUST00000072551 Eppk1Q8R0W0 6548 aa3.49□□□□□ -1.85
Clrn1-203ENSMUST00000072551 Lce3dE9Q8V1 98 aa3.46□□□□□ -1.86
Clrn1-203ENSMUST00000072551 ObscnA2AAJ9 8891 aaKnown RBP3.45□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Sprr2dO70555 85 aa3.44□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Hmcn1D3YXG0 5634 aa3.44□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Krtap19-4Q925H7 84 aa3.41□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Gm40460A0A1B0GR10 244 aa3.4□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Gm7579A0A1B0GRJ4 243 aa3.4□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Krtap5-5Q2TA51 241 aa3.4□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Krtap5-4Q62220 223 aa3.4□□□□□ -1.86
Clrn1-203ENSMUST00000072551 Lce3eF8VQJ0 98 aa3.39□□□□□ -1.87
Clrn1-203ENSMUST00000072551 Lce3fQ6PAI4 98 aa3.39□□□□□ -1.87
Clrn1-203ENSMUST00000072551 Muc19Q6PZE0 7524 aa3.31□□□□□ -1.88
Clrn1-203ENSMUST00000072551 Gm11639A0A1D5RLM8 5808 aa3.29□□□□□ -1.88
Clrn1-203ENSMUST00000072551 Lce3aQ497I5 98 aa3.24□□□□□ -1.89
Clrn1-203ENSMUST00000072551 4933428G20RikQ9D3X4 101 aa3.2□□□□□ -1.9
Clrn1-203ENSMUST00000072551 DstQ91ZU6 7393 aaKnown RBP3.17□□□□□ -1.9
Clrn1-203ENSMUST00000072551 Gpr98Q8VHN7 6298 aaKnown RBP3.05□□□□□ -1.92
Clrn1-203ENSMUST00000072551 Sprr2hO70559 108 aa2.99□□□□□ -1.93
Clrn1-203ENSMUST00000072551 AhnakE9Q616 5656 aaKnown RBP2.99□□□□□ -1.93
Clrn1-203ENSMUST00000072551 NebE9Q1W3 7152 aa2.99□□□□□ -1.93
Clrn1-203ENSMUST00000072551 Krtap4-16Q91W93 202 aa2.97□□□□□ -1.93
Clrn1-203ENSMUST00000072551 Sprr2fO70557 76 aa2.95□□□□□ -1.94
Clrn1-203ENSMUST00000072551 Sprr2eO70556 76 aa2.85□□□□□ -1.95
Clrn1-203ENSMUST00000072551 Gm10024A0A0A0MQA4 119 aa2.8□□□□□ -1.96
Clrn1-203ENSMUST00000072551 Muc16A0A140LJ72 8478 aa2.61□□□□□ -1.99
Clrn1-203ENSMUST00000072551 1110025L11RikO09048 78 aa2.6□□□□□ -1.99
Clrn1-203ENSMUST00000072551 Krtap6-5Q925H3 78 aa2.6□□□□□ -1.99
Clrn1-203ENSMUST00000072551 Krtap5-1Q64507 230 aa2.57□□□□□ -2
Clrn1-203ENSMUST00000072551 Gm4559A4IF42 199 aa2.52□□□□□ -2.01
Clrn1-203ENSMUST00000072551 Gm10229O08631 77 aa2.32□□□□□ -2.04
Clrn1-203ENSMUST00000072551 Krtap21-1Q925H4 128 aa2.12□□□□□ -2.07
Clrn1-203ENSMUST00000072551 Krtap6-2O08884 159 aa2.04□□□□□ -2.08
Clrn1-203ENSMUST00000072551 Sprr2bO70554 98 aa2.02□□□□□ -2.09
Clrn1-203ENSMUST00000072551 Phgr1Q8K0G7 91 aa1.79□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 31 ms