RNA–Protein interactions for RNA: ENSMUST00000072080.9

Lrrc40-201, Transcript of Leucine-rich repeat-containing protein 40, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lrrc40, Length 4,142 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40-201ENSMUST00000072080 Lce1bQ9D149 137 aa2.67□□□□□ -1.98
Lrrc40-201ENSMUST00000072080 4933428G20RikQ9D3X4 101 aa2.67□□□□□ -1.98
Lrrc40-201ENSMUST00000072080 Mt2P02798 61 aa2.66□□□□□ -1.98
Lrrc40-201ENSMUST00000072080 Lce1eQ9D139 143 aa2.64□□□□□ -1.99
Lrrc40-201ENSMUST00000072080 Gm10272F7CZ33 110 aa2.61□□□□□ -1.99
Lrrc40-201ENSMUST00000072080 Sprr2gO70558 76 aa2.6□□□□□ -1.99
Lrrc40-201ENSMUST00000072080 Gm11938Q9D3H4 131 aa2.59□□□□□ -1.99
Lrrc40-201ENSMUST00000072080 Syne1Q6ZWR6 8799 aa2.59□□□□□ -2
Lrrc40-201ENSMUST00000072080 Gm6358A0A087WPH4 74 aa2.59□□□□□ -2
Lrrc40-201ENSMUST00000072080 Mdn1A2ANY6 5589 aaKnown RBP2.58□□□□□ -2
Lrrc40-201ENSMUST00000072080 Gm11567Q9D141 195 aa2.57□□□□□ -2
Lrrc40-201ENSMUST00000072080 Muc5bE9Q5I3 4800 aa2.57□□□□□ -2
Lrrc40-201ENSMUST00000072080 Krtap31-2Q8CAY5 177 aa2.56□□□□□ -2
Lrrc40-201ENSMUST00000072080 Muc16A0A140LJ72 8478 aa2.51□□□□□ -2.01
Lrrc40-201ENSMUST00000072080 Gm10100J3QK64 120 aa2.5□□□□□ -2.01
Lrrc40-201ENSMUST00000072080 Lce1kJ3QP15 125 aa2.5□□□□□ -2.01
Lrrc40-201ENSMUST00000072080 Sprr2dO70555 85 aa2.49□□□□□ -2.01
Lrrc40-201ENSMUST00000072080 Gm10061D3Z714 54 aa2.48□□□□□ -2.01
Lrrc40-201ENSMUST00000072080 Gm45337A0A1B0GS71 263 aa2.48□□□□□ -2.01
Lrrc40-201ENSMUST00000072080 Krtap22-2J3QNX6 67 aa2.48□□□□□ -2.01
Lrrc40-201ENSMUST00000072080 Krtap4-13Q9D7P3 165 aa2.46□□□□□ -2.02
Lrrc40-201ENSMUST00000072080 Lce3bQ9CQM7 98 aa2.45□□□□□ -2.02
Lrrc40-201ENSMUST00000072080 Gm10142J3KMP7 120 aa2.43□□□□□ -2.02
Lrrc40-201ENSMUST00000072080 Krtap31-1Q9D644 177 aa2.43□□□□□ -2.02
Lrrc40-201ENSMUST00000072080 Gm11595B1AQA7 289 aa2.42□□□□□ -2.02
Lrrc40-201ENSMUST00000072080 Syne2Q6ZWQ0 6874 aaKnown RBP2.4□□□□□ -2.02
Lrrc40-201ENSMUST00000072080 Krtap4-8B1AQA8 209 aa2.39□□□□□ -2.03
Lrrc40-201ENSMUST00000072080 Gm10153A0A1B0GRL1 320 aa2.39□□□□□ -2.03
Lrrc40-201ENSMUST00000072080 Lce3cQ91V05 98 aa2.38□□□□□ -2.03
Lrrc40-201ENSMUST00000072080 Lce3dE9Q8V1 98 aa2.36□□□□□ -2.03
Lrrc40-201ENSMUST00000072080 Krtap19-4Q925H7 84 aa2.32□□□□□ -2.04
Lrrc40-201ENSMUST00000072080 Gm11596B1AQB0 205 aa2.32□□□□□ -2.04
Lrrc40-201ENSMUST00000072080 Sprr2iO70560 76 aa2.29□□□□□ -2.04
Lrrc40-201ENSMUST00000072080 Lce3eF8VQJ0 98 aa2.29□□□□□ -2.04
Lrrc40-201ENSMUST00000072080 Lce3fQ6PAI4 98 aa2.29□□□□□ -2.04
Lrrc40-201ENSMUST00000072080 Krtap5-4Q62220 223 aa2.27□□□□□ -2.05
Lrrc40-201ENSMUST00000072080 Lce3aQ497I5 98 aa2.26□□□□□ -2.05
Lrrc40-201ENSMUST00000072080 ObscnA2AAJ9 8891 aaKnown RBP2.25□□□□□ -2.05
Lrrc40-201ENSMUST00000072080 Sprr2hO70559 108 aa2.25□□□□□ -2.05
Lrrc40-201ENSMUST00000072080 Fsip2A2ARZ3 6995 aa2.24□□□□□ -2.05
Lrrc40-201ENSMUST00000072080 Krtap4-16Q91W93 202 aa2.23□□□□□ -2.05
Lrrc40-201ENSMUST00000072080 Sprr2fO70557 76 aa2.2□□□□□ -2.06
Lrrc40-201ENSMUST00000072080 Sprr2kO70562 68 aa2.2□□□□□ -2.06
Lrrc40-201ENSMUST00000072080 Krtap4-6Q3V4B7 195 aa2.2□□□□□ -2.06
Lrrc40-201ENSMUST00000072080 Sprr2eO70556 76 aa2.18□□□□□ -2.06
Lrrc40-201ENSMUST00000072080 2300003K06RikA2A4M0 262 aa2.15□□□□□ -2.07
Lrrc40-201ENSMUST00000072080 Gm11564A2A4L9 201 aa2.14□□□□□ -2.07
Lrrc40-201ENSMUST00000072080 Gm4553A0A1B0GSA9 284 aa2.09□□□□□ -2.07
Lrrc40-201ENSMUST00000072080 Krtap5-1Q64507 230 aa2.07□□□□□ -2.08
Lrrc40-201ENSMUST00000072080 Mt4P47945 62 aa2.07□□□□□ -2.08
Lrrc40-201ENSMUST00000072080 Krtap6-3A0A087WQL6 57 aa2.06□□□□□ -2.08
Lrrc40-201ENSMUST00000072080 Krtap5-2Q9D5Z7 189 aa2.04□□□□□ -2.08
Lrrc40-201ENSMUST00000072080 Macf1Q9QXZ0 7354 aaKnown RBP1.98□□□□□ -2.09
Lrrc40-201ENSMUST00000072080 Gm10024A0A0A0MQA4 119 aa1.97□□□□□ -2.09
Lrrc40-201ENSMUST00000072080 Mt1P02802 61 aaKnown RBP1.96□□□□□ -2.1
Lrrc40-201ENSMUST00000072080 Mt3P28184 68 aa1.94□□□□□ -2.1
Lrrc40-201ENSMUST00000072080 Gm4559A4IF42 199 aa1.93□□□□□ -2.1
Lrrc40-201ENSMUST00000072080 Krtap20-2E9Q0A8 60 aa1.91□□□□□ -2.1
Lrrc40-201ENSMUST00000072080 Gm11559Q9D3H7 191 aa1.87□□□□□ -2.11
Lrrc40-201ENSMUST00000072080 Muc19Q6PZE0 7524 aa1.85□□□□□ -2.11
Lrrc40-201ENSMUST00000072080 Krtap9-1Q64526 186 aa1.84□□□□□ -2.12
Lrrc40-201ENSMUST00000072080 Eppk1Q8R0W0 6548 aa1.82□□□□□ -2.12
Lrrc40-201ENSMUST00000072080 Krtap5-5Q2TA51 241 aa1.81□□□□□ -2.12
Lrrc40-201ENSMUST00000072080 Gm7579A0A1B0GRJ4 243 aa1.8□□□□□ -2.12
Lrrc40-201ENSMUST00000072080 Gm11568A2A4M2 211 aa1.8□□□□□ -2.12
Lrrc40-201ENSMUST00000072080 Gm11639A0A1D5RLM8 5808 aa1.78□□□□□ -2.12
Lrrc40-201ENSMUST00000072080 Hmcn1D3YXG0 5634 aa1.77□□□□□ -2.13
Lrrc40-201ENSMUST00000072080 DstQ91ZU6 7393 aaKnown RBP1.76□□□□□ -2.13
Lrrc40-201ENSMUST00000072080 Kmt2dQ6PDK2 5588 aa1.76□□□□□ -2.13
Lrrc40-201ENSMUST00000072080 NebE9Q1W3 7152 aa1.65□□□□□ -2.15
Lrrc40-201ENSMUST00000072080 Gm40460A0A1B0GR10 244 aa1.61□□□□□ -2.15
Lrrc40-201ENSMUST00000072080 Gpr98Q8VHN7 6298 aaKnown RBP1.59□□□□□ -2.15
Lrrc40-201ENSMUST00000072080 1110025L11RikO09048 78 aa1.54□□□□□ -2.16
Lrrc40-201ENSMUST00000072080 Krtap6-5Q925H3 78 aa1.54□□□□□ -2.16
Lrrc40-201ENSMUST00000072080 AhnakE9Q616 5656 aaKnown RBP1.48□□□□□ -2.17
Lrrc40-201ENSMUST00000072080 Sprr2bO70554 98 aa1.42□□□□□ -2.18
Lrrc40-201ENSMUST00000072080 Phgr1Q8K0G7 91 aa1.37□□□□□ -2.19
Lrrc40-201ENSMUST00000072080 Gm10229O08631 77 aa1.37□□□□□ -2.19
Lrrc40-201ENSMUST00000072080 Krtap21-1Q925H4 128 aa1.25□□□□□ -2.21
Lrrc40-201ENSMUST00000072080 Krtap6-2O08884 159 aa1.13□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 82.2 ms