RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 Sprr2dO70555 85 aa5.1□□□□□ -1.59
Pdlim1-201ENSMUST00000068439 Syne1Q6ZWR6 8799 aa5.09□□□□□ -1.59
Pdlim1-201ENSMUST00000068439 Krtap4-7Q9D732 168 aa5.07□□□□□ -1.6
Pdlim1-201ENSMUST00000068439 Krtap6-3A0A087WQL6 57 aa5.01□□□□□ -1.61
Pdlim1-201ENSMUST00000068439 Lce1eQ9D139 143 aa4.99□□□□□ -1.61
Pdlim1-201ENSMUST00000068439 Lce1lQ9D1G7 135 aa4.94□□□□□ -1.62
Pdlim1-201ENSMUST00000068439 Krtap19-4Q925H7 84 aa4.92□□□□□ -1.62
Pdlim1-201ENSMUST00000068439 A0A1Y7VJH8 109 aa4.9□□□□□ -1.62
Pdlim1-201ENSMUST00000068439 Lce1cQ9D1C5 147 aa4.9□□□□□ -1.63
Pdlim1-201ENSMUST00000068439 Lce1kJ3QP15 125 aa4.88□□□□□ -1.63
Pdlim1-201ENSMUST00000068439 Sprr2iO70560 76 aa4.88□□□□□ -1.63
Pdlim1-201ENSMUST00000068439 4933428G20RikQ9D3X4 101 aa4.83□□□□□ -1.64
Pdlim1-201ENSMUST00000068439 Lce3cQ91V05 98 aa4.79□□□□□ -1.64
Pdlim1-201ENSMUST00000068439 Krtap20-2E9Q0A8 60 aa4.79□□□□□ -1.64
Pdlim1-201ENSMUST00000068439 Krtap5-2Q9D5Z7 189 aa4.78□□□□□ -1.64
Pdlim1-201ENSMUST00000068439 Lce1fB9EJP6 147 aa4.75□□□□□ -1.65
Pdlim1-201ENSMUST00000068439 Gm11568A2A4M2 211 aa4.73□□□□□ -1.65
Pdlim1-201ENSMUST00000068439 Mt1P02802 61 aaKnown RBP4.73□□□□□ -1.65
Pdlim1-201ENSMUST00000068439 Krtap9-1Q64526 186 aa4.73□□□□□ -1.65
Pdlim1-201ENSMUST00000068439 Lce3dE9Q8V1 98 aa4.72□□□□□ -1.65
Pdlim1-201ENSMUST00000068439 Lce3eF8VQJ0 98 aa4.7□□□□□ -1.66
Pdlim1-201ENSMUST00000068439 Lce3fQ6PAI4 98 aa4.7□□□□□ -1.66
Pdlim1-201ENSMUST00000068439 Lce1a1Q9CQH5 143 aa4.68□□□□□ -1.66
Pdlim1-201ENSMUST00000068439 Gm10100J3QK64 120 aa4.66□□□□□ -1.66
Pdlim1-201ENSMUST00000068439 ObscnA2AAJ9 8891 aaKnown RBP4.56□□□□□ -1.68
Pdlim1-201ENSMUST00000068439 Gm10142J3KMP7 120 aa4.54□□□□□ -1.68
Pdlim1-201ENSMUST00000068439 Lce3aQ497I5 98 aa4.51□□□□□ -1.69
Pdlim1-201ENSMUST00000068439 Gm10153A0A1B0GRL1 320 aa4.49□□□□□ -1.69
Pdlim1-201ENSMUST00000068439 Gm4553A0A1B0GSA9 284 aa4.45□□□□□ -1.7
Pdlim1-201ENSMUST00000068439 Gm11559Q9D3H7 191 aa4.45□□□□□ -1.7
Pdlim1-201ENSMUST00000068439 Sprr2hO70559 108 aa4.42□□□□□ -1.7
Pdlim1-201ENSMUST00000068439 Gm45337A0A1B0GS71 263 aa4.38□□□□□ -1.71
Pdlim1-201ENSMUST00000068439 Macf1Q9QXZ0 7354 aaKnown RBP4.35□□□□□ -1.71
Pdlim1-201ENSMUST00000068439 Krtap31-1Q9D644 177 aa4.33□□□□□ -1.72
Pdlim1-201ENSMUST00000068439 Gm2431E9Q8S1 172 aa4.3□□□□□ -1.72
Pdlim1-201ENSMUST00000068439 Gm11554B1AQB2 190 aa4.27□□□□□ -1.73
Pdlim1-201ENSMUST00000068439 Mt3P28184 68 aa4.26□□□□□ -1.73
Pdlim1-201ENSMUST00000068439 Gm40460A0A1B0GR10 244 aa4.25□□□□□ -1.73
Pdlim1-201ENSMUST00000068439 Gm7579A0A1B0GRJ4 243 aa4.25□□□□□ -1.73
Pdlim1-201ENSMUST00000068439 Krtap5-5Q2TA51 241 aa4.25□□□□□ -1.73
Pdlim1-201ENSMUST00000068439 Krtap5-4Q62220 223 aa4.25□□□□□ -1.73
Pdlim1-201ENSMUST00000068439 Krtap31-2Q8CAY5 177 aa4.21□□□□□ -1.73
Pdlim1-201ENSMUST00000068439 Hmcn1D3YXG0 5634 aa4.19□□□□□ -1.74
Pdlim1-201ENSMUST00000068439 A0A1Y7VLE6 161 aa4.17□□□□□ -1.74
Pdlim1-201ENSMUST00000068439 Sprr2eO70556 76 aa4.16□□□□□ -1.74
Pdlim1-201ENSMUST00000068439 A030005L19RikA0A1Y7VIU2 113 aa4.14□□□□□ -1.75
Pdlim1-201ENSMUST00000068439 Kmt2dQ6PDK2 5588 aa4.11□□□□□ -1.75
Pdlim1-201ENSMUST00000068439 Gm39115A0A1B0GSH7 232 aa4.01□□□□□ -1.77
Pdlim1-201ENSMUST00000068439 Eppk1Q8R0W0 6548 aa3.89□□□□□ -1.79
Pdlim1-201ENSMUST00000068439 Krtap28-10A0A1Y7VP58 119 aa3.85□□□□□ -1.79
Pdlim1-201ENSMUST00000068439 Gm10024A0A0A0MQA4 119 aa3.84□□□□□ -1.79
Pdlim1-201ENSMUST00000068439 Sprr2fO70557 76 aa3.82□□□□□ -1.8
Pdlim1-201ENSMUST00000068439 Gm7544A0A1Y7VJ58 118 aa3.8□□□□□ -1.8
Pdlim1-201ENSMUST00000068439 DstQ91ZU6 7393 aaKnown RBP3.78□□□□□ -1.8
Pdlim1-201ENSMUST00000068439 Muc19Q6PZE0 7524 aa3.77□□□□□ -1.81
Pdlim1-201ENSMUST00000068439 Gm11639A0A1D5RLM8 5808 aa3.67□□□□□ -1.82
Pdlim1-201ENSMUST00000068439 Krtap28-13A0A087WQP5 138 aa3.61□□□□□ -1.83
Pdlim1-201ENSMUST00000068439 Krtap4-16Q91W93 202 aa3.55□□□□□ -1.84
Pdlim1-201ENSMUST00000068439 Gm45618A0A1B0GSA0 219 aa3.55□□□□□ -1.84
Pdlim1-201ENSMUST00000068439 1110025L11RikO09048 78 aa3.55□□□□□ -1.84
Pdlim1-201ENSMUST00000068439 Krtap6-5Q925H3 78 aa3.55□□□□□ -1.84
Pdlim1-201ENSMUST00000068439 A030005K14RikA0A1Y7VNY1 122 aa3.54□□□□□ -1.84
Pdlim1-201ENSMUST00000068439 A0A286YCP9 139 aa3.53□□□□□ -1.85
Pdlim1-201ENSMUST00000068439 AhnakE9Q616 5656 aaKnown RBP3.52□□□□□ -1.85
Pdlim1-201ENSMUST00000068439 NebE9Q1W3 7152 aa3.44□□□□□ -1.86
Pdlim1-201ENSMUST00000068439 Muc16A0A140LJ72 8478 aa3.41□□□□□ -1.86
Pdlim1-201ENSMUST00000068439 A0A1Y7VJ07 166 aa3.41□□□□□ -1.86
Pdlim1-201ENSMUST00000068439 A030003K21RikA0A1Y7VIM3 128 aa3.39□□□□□ -1.87
Pdlim1-201ENSMUST00000068439 Gm6217A0A1Y7VJK9 128 aa3.39□□□□□ -1.87
Pdlim1-201ENSMUST00000068439 Gpr98Q8VHN7 6298 aaKnown RBP3.39□□□□□ -1.87
Pdlim1-201ENSMUST00000068439 Gm29735A0A1B0GT06 219 aa3.19□□□□□ -1.9
Pdlim1-201ENSMUST00000068439 Gm10229O08631 77 aa3.15□□□□□ -1.91
Pdlim1-201ENSMUST00000068439 Gm11567Q9D141 195 aa3.11□□□□□ -1.91
Pdlim1-201ENSMUST00000068439 Sprr2bO70554 98 aa3.07□□□□□ -1.92
Pdlim1-201ENSMUST00000068439 A030014E15RikA0A1Y7VJV2 120 aa3.02□□□□□ -1.93
Pdlim1-201ENSMUST00000068439 Krtap21-1Q925H4 128 aa2.9□□□□□ -1.95
Pdlim1-201ENSMUST00000068439 Krtap6-2O08884 159 aa2.71□□□□□ -1.98
Pdlim1-201ENSMUST00000068439 Phgr1Q8K0G7 91 aa2.63□□□□□ -1.99
Pdlim1-201ENSMUST00000068439 Krtap5-1Q64507 230 aa2.08□□□□□ -2.08
Pdlim1-201ENSMUST00000068439 Gm4559A4IF42 199 aa1.83□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 223 ms