RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Lce1dQ9D731 133 aa4.38□□□□□ -1.71
Ccdc71-201ENSMUST00000061209 Krtap6-3A0A087WQL6 57 aa4.32□□□□□ -1.72
Ccdc71-201ENSMUST00000061209 Sprr2gO70558 76 aa4.26□□□□□ -1.73
Ccdc71-201ENSMUST00000061209 Gm11938Q9D3H4 131 aa4.24□□□□□ -1.73
Ccdc71-201ENSMUST00000061209 Lce1kJ3QP15 125 aa4.24□□□□□ -1.73
Ccdc71-201ENSMUST00000061209 Sprr2iO70560 76 aa4.2□□□□□ -1.74
Ccdc71-201ENSMUST00000061209 Krtap20-2E9Q0A8 60 aa4.18□□□□□ -1.74
Ccdc71-201ENSMUST00000061209 Lce1eQ9D139 143 aa4.13□□□□□ -1.75
Ccdc71-201ENSMUST00000061209 Lce1cQ9D1C5 147 aa4.12□□□□□ -1.75
Ccdc71-201ENSMUST00000061209 Lce1a1Q9CQH5 143 aa4.11□□□□□ -1.75
Ccdc71-201ENSMUST00000061209 Lce1fB9EJP6 147 aa4.1□□□□□ -1.75
Ccdc71-201ENSMUST00000061209 A0A1Y7VJH8 109 aa4.1□□□□□ -1.75
Ccdc71-201ENSMUST00000061209 Lce3cQ91V05 98 aa4.1□□□□□ -1.75
Ccdc71-201ENSMUST00000061209 Macf1Q9QXZ0 7354 aaKnown RBP4.09□□□□□ -1.75
Ccdc71-201ENSMUST00000061209 Sprr2dO70555 85 aa4.07□□□□□ -1.76
Ccdc71-201ENSMUST00000061209 Gm11568A2A4M2 211 aa4.02□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Krtap9-1Q64526 186 aa4.02□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Krtap31-2Q8CAY5 177 aa4□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Lce3eF8VQJ0 98 aa3.99□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Lce3fQ6PAI4 98 aa3.99□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Lce3dE9Q8V1 98 aa3.98□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Krtap5-2Q9D5Z7 189 aa3.98□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Krtap19-4Q925H7 84 aa3.98□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 ObscnA2AAJ9 8891 aaKnown RBP3.97□□□□□ -1.77
Ccdc71-201ENSMUST00000061209 Mt1P02802 61 aaKnown RBP3.96□□□□□ -1.78
Ccdc71-201ENSMUST00000061209 Krtap31-1Q9D644 177 aa3.94□□□□□ -1.78
Ccdc71-201ENSMUST00000061209 Gm10100J3QK64 120 aa3.9□□□□□ -1.79
Ccdc71-201ENSMUST00000061209 4933428G20RikQ9D3X4 101 aa3.89□□□□□ -1.79
Ccdc71-201ENSMUST00000061209 Gm11554B1AQB2 190 aa3.84□□□□□ -1.8
Ccdc71-201ENSMUST00000061209 Lce3aQ497I5 98 aa3.81□□□□□ -1.8
Ccdc71-201ENSMUST00000061209 Gm11559Q9D3H7 191 aa3.8□□□□□ -1.8
Ccdc71-201ENSMUST00000061209 Gm10142J3KMP7 120 aa3.76□□□□□ -1.81
Ccdc71-201ENSMUST00000061209 Hmcn1D3YXG0 5634 aa3.73□□□□□ -1.81
Ccdc71-201ENSMUST00000061209 Gm4553A0A1B0GSA9 284 aa3.72□□□□□ -1.81
Ccdc71-201ENSMUST00000061209 Gm10153A0A1B0GRL1 320 aa3.7□□□□□ -1.82
Ccdc71-201ENSMUST00000061209 Kmt2dQ6PDK2 5588 aa3.68□□□□□ -1.82
Ccdc71-201ENSMUST00000061209 Gm2431E9Q8S1 172 aa3.64□□□□□ -1.83
Ccdc71-201ENSMUST00000061209 Gm45337A0A1B0GS71 263 aa3.61□□□□□ -1.83
Ccdc71-201ENSMUST00000061209 Mt3P28184 68 aa3.58□□□□□ -1.84
Ccdc71-201ENSMUST00000061209 Sprr2hO70559 108 aa3.58□□□□□ -1.84
Ccdc71-201ENSMUST00000061209 Muc19Q6PZE0 7524 aa3.51□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 Eppk1Q8R0W0 6548 aa3.5□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 A030005L19RikA0A1Y7VIU2 113 aa3.48□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 Gm40460A0A1B0GR10 244 aa3.47□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 Gm7579A0A1B0GRJ4 243 aa3.47□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 Krtap5-5Q2TA51 241 aa3.47□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 Krtap5-4Q62220 223 aa3.47□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 DstQ91ZU6 7393 aaKnown RBP3.47□□□□□ -1.85
Ccdc71-201ENSMUST00000061209 A0A1Y7VLE6 161 aa3.42□□□□□ -1.86
Ccdc71-201ENSMUST00000061209 Muc16A0A140LJ72 8478 aa3.4□□□□□ -1.87
Ccdc71-201ENSMUST00000061209 Gm11639A0A1D5RLM8 5808 aa3.37□□□□□ -1.87
Ccdc71-201ENSMUST00000061209 Gm39115A0A1B0GSH7 232 aa3.3□□□□□ -1.88
Ccdc71-201ENSMUST00000061209 Sprr2eO70556 76 aa3.3□□□□□ -1.88
Ccdc71-201ENSMUST00000061209 NebE9Q1W3 7152 aa3.29□□□□□ -1.88
Ccdc71-201ENSMUST00000061209 Gm10024A0A0A0MQA4 119 aa3.22□□□□□ -1.89
Ccdc71-201ENSMUST00000061209 Sprr2fO70557 76 aa3.21□□□□□ -1.9
Ccdc71-201ENSMUST00000061209 Gpr98Q8VHN7 6298 aaKnown RBP3.1□□□□□ -1.91
Ccdc71-201ENSMUST00000061209 AhnakE9Q616 5656 aaKnown RBP3.07□□□□□ -1.92
Ccdc71-201ENSMUST00000061209 Krtap4-16Q91W93 202 aa3.01□□□□□ -1.93
Ccdc71-201ENSMUST00000061209 Gm45618A0A1B0GSA0 219 aa2.94□□□□□ -1.94
Ccdc71-201ENSMUST00000061209 1110025L11RikO09048 78 aa2.94□□□□□ -1.94
Ccdc71-201ENSMUST00000061209 Krtap6-5Q925H3 78 aa2.94□□□□□ -1.94
Ccdc71-201ENSMUST00000061209 A0A1Y7VJ07 166 aa2.77□□□□□ -1.97
Ccdc71-201ENSMUST00000061209 Krtap28-10A0A1Y7VP58 119 aa2.74□□□□□ -1.97
Ccdc71-201ENSMUST00000061209 Krtap28-13A0A087WQP5 138 aa2.64□□□□□ -1.99
Ccdc71-201ENSMUST00000061209 Gm11567Q9D141 195 aa2.63□□□□□ -1.99
Ccdc71-201ENSMUST00000061209 Gm10229O08631 77 aa2.62□□□□□ -1.99
Ccdc71-201ENSMUST00000061209 A030005K14RikA0A1Y7VNY1 122 aa2.6□□□□□ -1.99
Ccdc71-201ENSMUST00000061209 Gm29735A0A1B0GT06 219 aa2.58□□□□□ -2
Ccdc71-201ENSMUST00000061209 Gm7544A0A1Y7VJ58 118 aa2.46□□□□□ -2.02
Ccdc71-201ENSMUST00000061209 Sprr2bO70554 98 aa2.4□□□□□ -2.03
Ccdc71-201ENSMUST00000061209 Krtap21-1Q925H4 128 aa2.38□□□□□ -2.03
Ccdc71-201ENSMUST00000061209 Krtap6-2O08884 159 aa2.27□□□□□ -2.05
Ccdc71-201ENSMUST00000061209 A030003K21RikA0A1Y7VIM3 128 aa2.21□□□□□ -2.05
Ccdc71-201ENSMUST00000061209 Gm6217A0A1Y7VJK9 128 aa2.21□□□□□ -2.05
Ccdc71-201ENSMUST00000061209 A030014E15RikA0A1Y7VJV2 120 aa2.21□□□□□ -2.06
Ccdc71-201ENSMUST00000061209 A0A286YCP9 139 aa2.16□□□□□ -2.06
Ccdc71-201ENSMUST00000061209 Phgr1Q8K0G7 91 aa2.14□□□□□ -2.07
Ccdc71-201ENSMUST00000061209 Krtap5-1Q64507 230 aa1.82□□□□□ -2.12
Ccdc71-201ENSMUST00000061209 Gm4559A4IF42 199 aa1.5□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 83.8 ms