RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Lce3cQ91V05 98 aa2.34□□□□□ -2.03
Col6a6-201ENSMUST00000060896 Lce1dQ9D731 133 aa2.32□□□□□ -2.04
Col6a6-201ENSMUST00000060896 Gm11564A2A4L9 201 aa2.31□□□□□ -2.04
Col6a6-201ENSMUST00000060896 Gm11595B1AQA7 289 aa2.31□□□□□ -2.04
Col6a6-201ENSMUST00000060896 Krtap4-8B1AQA8 209 aa2.31□□□□□ -2.04
Col6a6-201ENSMUST00000060896 Lce3eF8VQJ0 98 aa2.28□□□□□ -2.04
Col6a6-201ENSMUST00000060896 Lce3fQ6PAI4 98 aa2.28□□□□□ -2.04
Col6a6-201ENSMUST00000060896 Gm10142J3KMP7 120 aa2.27□□□□□ -2.05
Col6a6-201ENSMUST00000060896 Sprr2gO70558 76 aa2.26□□□□□ -2.05
Col6a6-201ENSMUST00000060896 Krtap4-9B1AQA9 244 aa2.25□□□□□ -2.05
Col6a6-201ENSMUST00000060896 Krtap6-3A0A087WQL6 57 aa2.25□□□□□ -2.05
Col6a6-201ENSMUST00000060896 Macf1Q9QXZ0 7354 aaKnown RBP2.21□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Lce1fB9EJP6 147 aa2.21□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Lce3dE9Q8V1 98 aa2.21□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Lce1cQ9D1C5 147 aa2.21□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Lce1lQ9D1G7 135 aa2.21□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Krtap4-13Q9D7P3 165 aa2.21□□□□□ -2.06
Col6a6-201ENSMUST00000060896 2300003K06RikA2A4M0 262 aa2.18□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Lce3aQ497I5 98 aa2.18□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Sprr2iO70560 76 aa2.17□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Gm11938Q9D3H4 131 aa2.17□□□□□ -2.06
Col6a6-201ENSMUST00000060896 Krtap19-4Q925H7 84 aa2.11□□□□□ -2.07
Col6a6-201ENSMUST00000060896 ObscnA2AAJ9 8891 aaKnown RBP2.11□□□□□ -2.07
Col6a6-201ENSMUST00000060896 Lce1kJ3QP15 125 aa2.1□□□□□ -2.07
Col6a6-201ENSMUST00000060896 Sprr2dO70555 85 aa2.1□□□□□ -2.07
Col6a6-201ENSMUST00000060896 Lce1a1Q9CQH5 143 aa2.1□□□□□ -2.07
Col6a6-201ENSMUST00000060896 Krtap20-2E9Q0A8 60 aa2.05□□□□□ -2.08
Col6a6-201ENSMUST00000060896 A0A1Y7VJH8 109 aa2.04□□□□□ -2.08
Col6a6-201ENSMUST00000060896 Sprr2fO70557 76 aa2.03□□□□□ -2.08
Col6a6-201ENSMUST00000060896 Eppk1Q8R0W0 6548 aa2.01□□□□□ -2.09
Col6a6-201ENSMUST00000060896 Muc19Q6PZE0 7524 aa2□□□□□ -2.09
Col6a6-201ENSMUST00000060896 Krtap4-16Q91W93 202 aa2□□□□□ -2.09
Col6a6-201ENSMUST00000060896 Krtap9-1Q64526 186 aa1.99□□□□□ -2.09
Col6a6-201ENSMUST00000060896 Gm10024A0A0A0MQA4 119 aa1.96□□□□□ -2.1
Col6a6-201ENSMUST00000060896 Sprr2eO70556 76 aa1.95□□□□□ -2.1
Col6a6-201ENSMUST00000060896 DstQ91ZU6 7393 aaKnown RBP1.94□□□□□ -2.1
Col6a6-201ENSMUST00000060896 Sprr2hO70559 108 aa1.93□□□□□ -2.1
Col6a6-201ENSMUST00000060896 Gpr98Q8VHN7 6298 aaKnown RBP1.92□□□□□ -2.1
Col6a6-201ENSMUST00000060896 Gm11554B1AQB2 190 aa1.9□□□□□ -2.11
Col6a6-201ENSMUST00000060896 Mt1P02802 61 aaKnown RBP1.89□□□□□ -2.11
Col6a6-201ENSMUST00000060896 Krtap5-2Q9D5Z7 189 aa1.88□□□□□ -2.11
Col6a6-201ENSMUST00000060896 NebE9Q1W3 7152 aa1.88□□□□□ -2.11
Col6a6-201ENSMUST00000060896 A030005L19RikA0A1Y7VIU2 113 aa1.84□□□□□ -2.11
Col6a6-201ENSMUST00000060896 A0A1Y7VLE6 161 aa1.83□□□□□ -2.12
Col6a6-201ENSMUST00000060896 Gm11568A2A4M2 211 aa1.83□□□□□ -2.12
Col6a6-201ENSMUST00000060896 Gm4553A0A1B0GSA9 284 aa1.81□□□□□ -2.12
Col6a6-201ENSMUST00000060896 Mt3P28184 68 aa1.8□□□□□ -2.12
Col6a6-201ENSMUST00000060896 Gm11639A0A1D5RLM8 5808 aa1.8□□□□□ -2.12
Col6a6-201ENSMUST00000060896 Kmt2dQ6PDK2 5588 aa1.79□□□□□ -2.12
Col6a6-201ENSMUST00000060896 Gm10153A0A1B0GRL1 320 aa1.77□□□□□ -2.13
Col6a6-201ENSMUST00000060896 Gm45337A0A1B0GS71 263 aa1.72□□□□□ -2.13
Col6a6-201ENSMUST00000060896 Hmcn1D3YXG0 5634 aa1.72□□□□□ -2.13
Col6a6-201ENSMUST00000060896 Gm40460A0A1B0GR10 244 aa1.69□□□□□ -2.14
Col6a6-201ENSMUST00000060896 Gm7579A0A1B0GRJ4 243 aa1.69□□□□□ -2.14
Col6a6-201ENSMUST00000060896 Krtap5-5Q2TA51 241 aa1.69□□□□□ -2.14
Col6a6-201ENSMUST00000060896 Krtap5-4Q62220 223 aa1.69□□□□□ -2.14
Col6a6-201ENSMUST00000060896 Gm2431E9Q8S1 172 aa1.68□□□□□ -2.14
Col6a6-201ENSMUST00000060896 Krtap28-10A0A1Y7VP58 119 aa1.67□□□□□ -2.14
Col6a6-201ENSMUST00000060896 Gm39115A0A1B0GSH7 232 aa1.64□□□□□ -2.15
Col6a6-201ENSMUST00000060896 A0A1Y7VJ07 166 aa1.6□□□□□ -2.15
Col6a6-201ENSMUST00000060896 Gm45618A0A1B0GSA0 219 aa1.54□□□□□ -2.16
Col6a6-201ENSMUST00000060896 1110025L11RikO09048 78 aa1.47□□□□□ -2.17
Col6a6-201ENSMUST00000060896 Krtap6-5Q925H3 78 aa1.47□□□□□ -2.17
Col6a6-201ENSMUST00000060896 AhnakE9Q616 5656 aaKnown RBP1.43□□□□□ -2.18
Col6a6-201ENSMUST00000060896 A0A286YCP9 139 aa1.38□□□□□ -2.19
Col6a6-201ENSMUST00000060896 Sprr2bO70554 98 aa1.38□□□□□ -2.19
Col6a6-201ENSMUST00000060896 Gm11567Q9D141 195 aa1.38□□□□□ -2.19
Col6a6-201ENSMUST00000060896 A030014E15RikA0A1Y7VJV2 120 aa1.36□□□□□ -2.19
Col6a6-201ENSMUST00000060896 A030005K14RikA0A1Y7VNY1 122 aa1.35□□□□□ -2.19
Col6a6-201ENSMUST00000060896 Gm10229O08631 77 aa1.34□□□□□ -2.19
Col6a6-201ENSMUST00000060896 Gm29735A0A1B0GT06 219 aa1.26□□□□□ -2.21
Col6a6-201ENSMUST00000060896 Phgr1Q8K0G7 91 aa1.24□□□□□ -2.21
Col6a6-201ENSMUST00000060896 A030003K21RikA0A1Y7VIM3 128 aa1.18□□□□□ -2.22
Col6a6-201ENSMUST00000060896 Krtap28-13A0A087WQP5 138 aa1.17□□□□□ -2.22
Col6a6-201ENSMUST00000060896 Krtap21-1Q925H4 128 aa1.14□□□□□ -2.23
Col6a6-201ENSMUST00000060896 Krtap6-2O08884 159 aa1.13□□□□□ -2.23
Col6a6-201ENSMUST00000060896 Gm7544A0A1Y7VJ58 118 aa1.12□□□□□ -2.23
Col6a6-201ENSMUST00000060896 Gm4559A4IF42 199 aa1.07□□□□□ -2.24
Col6a6-201ENSMUST00000060896 Gm6217A0A1Y7VJK9 128 aa0.92□□□□□ -2.26
Col6a6-201ENSMUST00000060896 Krtap5-1Q64507 230 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 126.3 ms