RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Lce1iQ9D6P5 149 aa2.84□□□□□ -1.95
Bdnf-201ENSMUST00000053317 Sprr2a3Q4KL71 83 aa2.82□□□□□ -1.96
Bdnf-201ENSMUST00000053317 Sprr2a1Q9CQK8 83 aa2.82□□□□□ -1.96
Bdnf-201ENSMUST00000053317 Lce1a2Q9D1K4 149 aa2.8□□□□□ -1.96
Bdnf-201ENSMUST00000053317 Krtap4-13Q9D7P3 165 aa2.77□□□□□ -1.97
Bdnf-201ENSMUST00000053317 Gm45618A0A1B0GSA0 219 aa2.76□□□□□ -1.97
Bdnf-201ENSMUST00000053317 Krtap22-2J3QNX6 67 aa2.75□□□□□ -1.97
Bdnf-201ENSMUST00000053317 Sprr2gO70558 76 aa2.73□□□□□ -1.97
Bdnf-201ENSMUST00000053317 Krtap9-3Q3V2C1 136 aa2.7□□□□□ -1.98
Bdnf-201ENSMUST00000053317 2300003K06RikA2A4M0 262 aa2.68□□□□□ -1.98
Bdnf-201ENSMUST00000053317 Macf1Q9QXZ0 7354 aaKnown RBP2.68□□□□□ -1.98
Bdnf-201ENSMUST00000053317 Krtap19-9bQ99NG9 58 aa2.67□□□□□ -1.98
Bdnf-201ENSMUST00000053317 Gm39115A0A1B0GSH7 232 aa2.62□□□□□ -1.99
Bdnf-201ENSMUST00000053317 Syne1Q6ZWR6 8799 aa2.62□□□□□ -1.99
Bdnf-201ENSMUST00000053317 2310046K23RikA0A0A6YVW6 87 aa2.61□□□□□ -1.99
Bdnf-201ENSMUST00000053317 Krtap31-1Q9D644 177 aa2.57□□□□□ -2
Bdnf-201ENSMUST00000053317 Krtap6-3A0A087WQL6 57 aa2.54□□□□□ -2
Bdnf-201ENSMUST00000053317 Gm10272F7CZ33 110 aa2.51□□□□□ -2.01
Bdnf-201ENSMUST00000053317 Lce3bQ9CQM7 98 aa2.49□□□□□ -2.01
Bdnf-201ENSMUST00000053317 Lce1bQ9D149 137 aa2.48□□□□□ -2.01
Bdnf-201ENSMUST00000053317 Krtap31-2Q8CAY5 177 aa2.46□□□□□ -2.02
Bdnf-201ENSMUST00000053317 Sprr2iO70560 76 aa2.46□□□□□ -2.02
Bdnf-201ENSMUST00000053317 Gm10100J3QK64 120 aa2.44□□□□□ -2.02
Bdnf-201ENSMUST00000053317 Gm11554B1AQB2 190 aa2.44□□□□□ -2.02
Bdnf-201ENSMUST00000053317 Lce1kJ3QP15 125 aa2.41□□□□□ -2.02
Bdnf-201ENSMUST00000053317 Lce1hQ9D6R3 140 aa2.41□□□□□ -2.02
Bdnf-201ENSMUST00000053317 Gm29735A0A1B0GT06 219 aa2.4□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Krtap20-2E9Q0A8 60 aa2.4□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Mt3P28184 68 aa2.39□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Lce1cQ9D1C5 147 aa2.39□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Muc16A0A140LJ72 8478 aa2.39□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Lce1fB9EJP6 147 aa2.38□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Gm2431E9Q8S1 172 aa2.35□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Gm10142J3KMP7 120 aa2.35□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Gm11567Q9D141 195 aa2.35□□□□□ -2.03
Bdnf-201ENSMUST00000053317 Lce3cQ91V05 98 aa2.32□□□□□ -2.04
Bdnf-201ENSMUST00000053317 Hmcn1D3YXG0 5634 aa2.3□□□□□ -2.04
Bdnf-201ENSMUST00000053317 DstQ91ZU6 7393 aaKnown RBP2.29□□□□□ -2.04
Bdnf-201ENSMUST00000053317 Gm45337A0A1B0GS71 263 aa2.28□□□□□ -2.04
Bdnf-201ENSMUST00000053317 NebE9Q1W3 7152 aa2.27□□□□□ -2.05
Bdnf-201ENSMUST00000053317 Lce1eQ9D139 143 aa2.25□□□□□ -2.05
Bdnf-201ENSMUST00000053317 Lce3dE9Q8V1 98 aa2.25□□□□□ -2.05
Bdnf-201ENSMUST00000053317 Krtap19-4Q925H7 84 aa2.23□□□□□ -2.05
Bdnf-201ENSMUST00000053317 Lce3eF8VQJ0 98 aa2.22□□□□□ -2.05
Bdnf-201ENSMUST00000053317 Lce3fQ6PAI4 98 aa2.22□□□□□ -2.05
Bdnf-201ENSMUST00000053317 Muc19Q6PZE0 7524 aa2.21□□□□□ -2.06
Bdnf-201ENSMUST00000053317 Lce3aQ497I5 98 aa2.19□□□□□ -2.06
Bdnf-201ENSMUST00000053317 Kmt2dQ6PDK2 5588 aa2.15□□□□□ -2.06
Bdnf-201ENSMUST00000053317 Eppk1Q8R0W0 6548 aa2.15□□□□□ -2.07
Bdnf-201ENSMUST00000053317 Gm11639A0A1D5RLM8 5808 aa2.14□□□□□ -2.07
Bdnf-201ENSMUST00000053317 ObscnA2AAJ9 8891 aaKnown RBP2.12□□□□□ -2.07
Bdnf-201ENSMUST00000053317 Sprr2fO70557 76 aa2.11□□□□□ -2.07
Bdnf-201ENSMUST00000053317 Gm11559Q9D3H7 191 aa2.11□□□□□ -2.07
Bdnf-201ENSMUST00000053317 Gm11568A2A4M2 211 aa2.11□□□□□ -2.07
Bdnf-201ENSMUST00000053317 Krtap9-1Q64526 186 aa2.11□□□□□ -2.07
Bdnf-201ENSMUST00000053317 Gm11938Q9D3H4 131 aa2.09□□□□□ -2.07
Bdnf-201ENSMUST00000053317 Gm10153A0A1B0GRL1 320 aa2.08□□□□□ -2.08
Bdnf-201ENSMUST00000053317 Gm10024A0A0A0MQA4 119 aa2.06□□□□□ -2.08
Bdnf-201ENSMUST00000053317 Gpr98Q8VHN7 6298 aaKnown RBP2.06□□□□□ -2.08
Bdnf-201ENSMUST00000053317 Mt1P02802 61 aaKnown RBP2.05□□□□□ -2.08
Bdnf-201ENSMUST00000053317 Krtap5-2Q9D5Z7 189 aa2.05□□□□□ -2.08
Bdnf-201ENSMUST00000053317 Sprr2eO70556 76 aa2.01□□□□□ -2.09
Bdnf-201ENSMUST00000053317 Krtap4-16Q91W93 202 aa2.01□□□□□ -2.09
Bdnf-201ENSMUST00000053317 Sprr2dO70555 85 aa2□□□□□ -2.09
Bdnf-201ENSMUST00000053317 Krtap5-4Q62220 223 aa1.97□□□□□ -2.09
Bdnf-201ENSMUST00000053317 Gm4553A0A1B0GSA9 284 aa1.95□□□□□ -2.1
Bdnf-201ENSMUST00000053317 Sprr2hO70559 108 aa1.92□□□□□ -2.1
Bdnf-201ENSMUST00000053317 Krtap5-1Q64507 230 aa1.91□□□□□ -2.1
Bdnf-201ENSMUST00000053317 AhnakE9Q616 5656 aaKnown RBP1.72□□□□□ -2.13
Bdnf-201ENSMUST00000053317 Gm40460A0A1B0GR10 244 aa1.72□□□□□ -2.13
Bdnf-201ENSMUST00000053317 Gm7579A0A1B0GRJ4 243 aa1.72□□□□□ -2.13
Bdnf-201ENSMUST00000053317 Krtap5-5Q2TA51 241 aa1.72□□□□□ -2.13
Bdnf-201ENSMUST00000053317 Gm4559A4IF42 199 aa1.71□□□□□ -2.14
Bdnf-201ENSMUST00000053317 1110025L11RikO09048 78 aa1.52□□□□□ -2.17
Bdnf-201ENSMUST00000053317 Krtap6-5Q925H3 78 aa1.52□□□□□ -2.17
Bdnf-201ENSMUST00000053317 Sprr2bO70554 98 aa1.51□□□□□ -2.17
Bdnf-201ENSMUST00000053317 Gm10229O08631 77 aa1.39□□□□□ -2.19
Bdnf-201ENSMUST00000053317 Phgr1Q8K0G7 91 aa1.28□□□□□ -2.2
Bdnf-201ENSMUST00000053317 Krtap6-2O08884 159 aa1.22□□□□□ -2.21
Bdnf-201ENSMUST00000053317 Krtap21-1Q925H4 128 aa1.18□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 102.8 ms