RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 2310046K23RikA0A0A6YVW6 87 aa7,63□□□□□ -1,19
Ssbp4-201ENSMUST00000049908 Krtap5-2Q9D5Z7 189 aa7,49□□□□□ -1,21
Ssbp4-201ENSMUST00000049908 Sprr2iO70560 76 aa7,41□□□□□ -1,22
Ssbp4-201ENSMUST00000049908 Lce1kJ3QP15 125 aa7,39□□□□□ -1,23
Ssbp4-201ENSMUST00000049908 Tnp1P10856 55 aa7,39□□□□□ -1,23
Ssbp4-201ENSMUST00000049908 Syne1Q6ZWR6 8799 aa7,34□□□□□ -1,23
Ssbp4-201ENSMUST00000049908 Ndufaf8A2AMZ4 74 aa7,33□□□□□ -1,24
Ssbp4-201ENSMUST00000049908 Gm11559Q9D3H7 191 aa7,31□□□□□ -1,24
Ssbp4-201ENSMUST00000049908 Lce3bQ9CQM7 98 aa7,25□□□□□ -1,25
Ssbp4-201ENSMUST00000049908 Eppk1Q8R0W0 6548 aa7,23□□□□□ -1,25
Ssbp4-201ENSMUST00000049908 Gm10272F7CZ33 110 aa7,23□□□□□ -1,25
Ssbp4-201ENSMUST00000049908 A030005L19RikA0A1Y7VIU2 113 aa7,2□□□□□ -1,26
Ssbp4-201ENSMUST00000049908 Gm11568A2A4M2 211 aa7,17□□□□□ -1,26
Ssbp4-201ENSMUST00000049908 Krtap9-1Q64526 186 aa7,17□□□□□ -1,26
Ssbp4-201ENSMUST00000049908 Gm4553A0A1B0GSA9 284 aa7,15□□□□□ -1,27
Ssbp4-201ENSMUST00000049908 Gm11554B1AQB2 190 aa7,11□□□□□ -1,27
Ssbp4-201ENSMUST00000049908 Macf1Q9QXZ0 7354 aaKnown RBP7,06□□□□□ -1,28
Ssbp4-201ENSMUST00000049908 Kmt2dQ6PDK2 5588 aa6,99□□□□□ -1,29
Ssbp4-201ENSMUST00000049908 Lce1fB9EJP6 147 aa6,94□□□□□ -1,3
Ssbp4-201ENSMUST00000049908 Lce1cQ9D1C5 147 aa6,94□□□□□ -1,3
Ssbp4-201ENSMUST00000049908 Gm2431E9Q8S1 172 aa6,91□□□□□ -1,3
Ssbp4-201ENSMUST00000049908 Gm45337A0A1B0GS71 263 aa6,85□□□□□ -1,31
Ssbp4-201ENSMUST00000049908 Gm11938Q9D3H4 131 aa6,79□□□□□ -1,32
Ssbp4-201ENSMUST00000049908 Gm11639A0A1D5RLM8 5808 aa6,77□□□□□ -1,33
Ssbp4-201ENSMUST00000049908 Gm10153A0A1B0GRL1 320 aa6,71□□□□□ -1,34
Ssbp4-201ENSMUST00000049908 Mt1P02802 61 aaKnown RBP6,7□□□□□ -1,34
Ssbp4-201ENSMUST00000049908 Krtap19-4Q925H7 84 aa6,65□□□□□ -1,35
Ssbp4-201ENSMUST00000049908 Gm40460A0A1B0GR10 244 aa6,62□□□□□ -1,35
Ssbp4-201ENSMUST00000049908 Gm7579A0A1B0GRJ4 243 aa6,62□□□□□ -1,35
Ssbp4-201ENSMUST00000049908 Krtap5-5Q2TA51 241 aa6,62□□□□□ -1,35
Ssbp4-201ENSMUST00000049908 Krtap5-4Q62220 223 aa6,62□□□□□ -1,35
Ssbp4-201ENSMUST00000049908 Muc19Q6PZE0 7524 aa6,58□□□□□ -1,36
Ssbp4-201ENSMUST00000049908 Hmcn1D3YXG0 5634 aa6,57□□□□□ -1,36
Ssbp4-201ENSMUST00000049908 Gm9112A2AI92 75 aa6,53□□□□□ -1,36
Ssbp4-201ENSMUST00000049908 Gm39115A0A1B0GSH7 232 aa6,49□□□□□ -1,37
Ssbp4-201ENSMUST00000049908 Lce3cQ91V05 98 aa6,49□□□□□ -1,37
Ssbp4-201ENSMUST00000049908 Lce3dE9Q8V1 98 aa6,39□□□□□ -1,39
Ssbp4-201ENSMUST00000049908 Gpr98Q8VHN7 6298 aaKnown RBP6,38□□□□□ -1,39
Ssbp4-201ENSMUST00000049908 DstQ91ZU6 7393 aaKnown RBP6,33□□□□□ -1,4
Ssbp4-201ENSMUST00000049908 Sprr2dO70555 85 aa6,3□□□□□ -1,4
Ssbp4-201ENSMUST00000049908 ObscnA2AAJ9 8891 aaKnown RBP6,24□□□□□ -1,41
Ssbp4-201ENSMUST00000049908 Lce3eF8VQJ0 98 aa6,23□□□□□ -1,41
Ssbp4-201ENSMUST00000049908 Lce3fQ6PAI4 98 aa6,23□□□□□ -1,41
Ssbp4-201ENSMUST00000049908 Mt3P28184 68 aa6,2□□□□□ -1,42
Ssbp4-201ENSMUST00000049908 4933428G20RikQ9D3X4 101 aa6,18□□□□□ -1,42
Ssbp4-201ENSMUST00000049908 Krtap4-16Q91W93 202 aa6,09□□□□□ -1,44
Ssbp4-201ENSMUST00000049908 NebE9Q1W3 7152 aa6,07□□□□□ -1,44
Ssbp4-201ENSMUST00000049908 Gm45618A0A1B0GSA0 219 aa6,04□□□□□ -1,44
Ssbp4-201ENSMUST00000049908 Sprr2fO70557 76 aa6,01□□□□□ -1,45
Ssbp4-201ENSMUST00000049908 Lce3aQ497I5 98 aa5,96□□□□□ -1,45
Ssbp4-201ENSMUST00000049908 AhnakE9Q616 5656 aaKnown RBP5,89□□□□□ -1,47
Ssbp4-201ENSMUST00000049908 A0A1Y7VLE6 161 aa5,89□□□□□ -1,47
Ssbp4-201ENSMUST00000049908 Gm10100J3QK64 120 aa5,88□□□□□ -1,47
Ssbp4-201ENSMUST00000049908 Gm10142J3KMP7 120 aa5,58□□□□□ -1,52
Ssbp4-201ENSMUST00000049908 Sprr2eO70556 76 aa5,45□□□□□ -1,54
Ssbp4-201ENSMUST00000049908 Sprr2hO70559 108 aa5,44□□□□□ -1,54
Ssbp4-201ENSMUST00000049908 Gm10024A0A0A0MQA4 119 aa5,31□□□□□ -1,56
Ssbp4-201ENSMUST00000049908 A0A1Y7VJ07 166 aa4,97□□□□□ -1,61
Ssbp4-201ENSMUST00000049908 Muc16A0A140LJ72 8478 aa4,91□□□□□ -1,62
Ssbp4-201ENSMUST00000049908 Gm29735A0A1B0GT06 219 aa4,88□□□□□ -1,63
Ssbp4-201ENSMUST00000049908 Krtap31-1Q9D644 177 aa4,87□□□□□ -1,63
Ssbp4-201ENSMUST00000049908 1110025L11RikO09048 78 aa4,81□□□□□ -1,64
Ssbp4-201ENSMUST00000049908 Krtap6-5Q925H3 78 aa4,81□□□□□ -1,64
Ssbp4-201ENSMUST00000049908 Gm11567Q9D141 195 aa4,57□□□□□ -1,68
Ssbp4-201ENSMUST00000049908 Krtap31-2Q8CAY5 177 aa4,51□□□□□ -1,69
Ssbp4-201ENSMUST00000049908 Gm10229O08631 77 aa4,32□□□□□ -1,72
Ssbp4-201ENSMUST00000049908 A0A286YCP9 139 aa4,27□□□□□ -1,73
Ssbp4-201ENSMUST00000049908 Gm7544A0A1Y7VJ58 118 aa4,18□□□□□ -1,74
Ssbp4-201ENSMUST00000049908 Krtap28-13A0A087WQP5 138 aa4,1□□□□□ -1,75
Ssbp4-201ENSMUST00000049908 A030005K14RikA0A1Y7VNY1 122 aa3,96□□□□□ -1,78
Ssbp4-201ENSMUST00000049908 A030003K21RikA0A1Y7VIM3 128 aa3,91□□□□□ -1,78
Ssbp4-201ENSMUST00000049908 Gm6217A0A1Y7VJK9 128 aa3,91□□□□□ -1,78
Ssbp4-201ENSMUST00000049908 Krtap21-1Q925H4 128 aa3,88□□□□□ -1,79
Ssbp4-201ENSMUST00000049908 Krtap28-10A0A1Y7VP58 119 aa3,86□□□□□ -1,79
Ssbp4-201ENSMUST00000049908 Sprr2bO70554 98 aa3,86□□□□□ -1,79
Ssbp4-201ENSMUST00000049908 Krtap6-2O08884 159 aa3,86□□□□□ -1,79
Ssbp4-201ENSMUST00000049908 Krtap5-1Q64507 230 aa3,7□□□□□ -1,82
Ssbp4-201ENSMUST00000049908 A030014E15RikA0A1Y7VJV2 120 aa3,48□□□□□ -1,85
Ssbp4-201ENSMUST00000049908 Phgr1Q8K0G7 91 aa3,27□□□□□ -1,89
Ssbp4-201ENSMUST00000049908 Gm4559A4IF42 199 aa2,82□□□□□ -1,96
Retrieved 80 of 22,080 RNA–protein pairs in 9,7 ms