RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Krtap20-2E9Q0A8 60 aa8.9□□□□□ -0.98
Shf-201ENSMUST00000048635 Syne1Q6ZWR6 8799 aa8.88□□□□□ -0.99
Shf-201ENSMUST00000048635 Sprr2iO70560 76 aa8.87□□□□□ -0.99
Shf-201ENSMUST00000048635 Lce1a1Q9CQH5 143 aa8.87□□□□□ -0.99
Shf-201ENSMUST00000048635 Krtap5-2Q9D5Z7 189 aa8.8□□□□□ -1
Shf-201ENSMUST00000048635 Lce1kJ3QP15 125 aa8.76□□□□□ -1.01
Shf-201ENSMUST00000048635 Gm11938Q9D3H4 131 aa8.75□□□□□ -1.01
Shf-201ENSMUST00000048635 Lce1eQ9D139 143 aa8.52□□□□□ -1.05
Shf-201ENSMUST00000048635 Gm11568A2A4M2 211 aa8.5□□□□□ -1.05
Shf-201ENSMUST00000048635 Krtap9-1Q64526 186 aa8.5□□□□□ -1.05
Shf-201ENSMUST00000048635 Lce1fB9EJP6 147 aa8.45□□□□□ -1.06
Shf-201ENSMUST00000048635 Lce1cQ9D1C5 147 aa8.45□□□□□ -1.06
Shf-201ENSMUST00000048635 Gm11559Q9D3H7 191 aa8.37□□□□□ -1.07
Shf-201ENSMUST00000048635 Gm4553A0A1B0GSA9 284 aa8.3□□□□□ -1.08
Shf-201ENSMUST00000048635 Gm20538F6Z9R1 75 aa8.28□□□□□ -1.08
Shf-201ENSMUST00000048635 Mt1P02802 61 aaKnown RBP8.28□□□□□ -1.08
Shf-201ENSMUST00000048635 Lce3cQ91V05 98 aa8.23□□□□□ -1.09
Shf-201ENSMUST00000048635 Sprr2dO70555 85 aa8.21□□□□□ -1.09
Shf-201ENSMUST00000048635 Lce3dE9Q8V1 98 aa8.13□□□□□ -1.11
Shf-201ENSMUST00000048635 Krtap19-4Q925H7 84 aa8.13□□□□□ -1.11
Shf-201ENSMUST00000048635 A030005L19RikA0A1Y7VIU2 113 aa8.11□□□□□ -1.11
Shf-201ENSMUST00000048635 Gm45337A0A1B0GS71 263 aa8.08□□□□□ -1.12
Shf-201ENSMUST00000048635 Gm10153A0A1B0GRL1 320 aa8.03□□□□□ -1.12
Shf-201ENSMUST00000048635 Gm11554B1AQB2 190 aa8.02□□□□□ -1.13
Shf-201ENSMUST00000048635 Lce3eF8VQJ0 98 aa7.98□□□□□ -1.13
Shf-201ENSMUST00000048635 Lce3fQ6PAI4 98 aa7.98□□□□□ -1.13
Shf-201ENSMUST00000048635 Gm2431E9Q8S1 172 aa7.97□□□□□ -1.13
Shf-201ENSMUST00000048635 Macf1Q9QXZ0 7354 aaKnown RBP7.92□□□□□ -1.14
Shf-201ENSMUST00000048635 Kmt2dQ6PDK2 5588 aa7.84□□□□□ -1.15
Shf-201ENSMUST00000048635 Gm40460A0A1B0GR10 244 aa7.82□□□□□ -1.16
Shf-201ENSMUST00000048635 Gm7579A0A1B0GRJ4 243 aa7.82□□□□□ -1.16
Shf-201ENSMUST00000048635 Krtap5-5Q2TA51 241 aa7.82□□□□□ -1.16
Shf-201ENSMUST00000048635 Krtap5-4Q62220 223 aa7.82□□□□□ -1.16
Shf-201ENSMUST00000048635 ObscnA2AAJ9 8891 aaKnown RBP7.81□□□□□ -1.16
Shf-201ENSMUST00000048635 4933428G20RikQ9D3X4 101 aa7.8□□□□□ -1.16
Shf-201ENSMUST00000048635 Eppk1Q8R0W0 6548 aa7.72□□□□□ -1.17
Shf-201ENSMUST00000048635 Lce3aQ497I5 98 aa7.64□□□□□ -1.19
Shf-201ENSMUST00000048635 Mt3P28184 68 aa7.61□□□□□ -1.19
Shf-201ENSMUST00000048635 Hmcn1D3YXG0 5634 aa7.57□□□□□ -1.2
Shf-201ENSMUST00000048635 Gm39115A0A1B0GSH7 232 aa7.52□□□□□ -1.2
Shf-201ENSMUST00000048635 Gm10100J3QK64 120 aa7.52□□□□□ -1.21
Shf-201ENSMUST00000048635 Gm10142J3KMP7 120 aa7.28□□□□□ -1.24
Shf-201ENSMUST00000048635 Ndufaf8A2AMZ4 74 aa7.23□□□□□ -1.25
Shf-201ENSMUST00000048635 A0A1Y7VLE6 161 aa7.19□□□□□ -1.26
Shf-201ENSMUST00000048635 Muc19Q6PZE0 7524 aa7.16□□□□□ -1.26
Shf-201ENSMUST00000048635 Gm11639A0A1D5RLM8 5808 aa7.16□□□□□ -1.26
Shf-201ENSMUST00000048635 DstQ91ZU6 7393 aaKnown RBP7.08□□□□□ -1.28
Shf-201ENSMUST00000048635 Sprr2hO70559 108 aa7.06□□□□□ -1.28
Shf-201ENSMUST00000048635 Sprr2fO70557 76 aa6.93□□□□□ -1.3
Shf-201ENSMUST00000048635 Gm45618A0A1B0GSA0 219 aa6.87□□□□□ -1.31
Shf-201ENSMUST00000048635 Krtap4-16Q91W93 202 aa6.77□□□□□ -1.33
Shf-201ENSMUST00000048635 Sprr2eO70556 76 aa6.72□□□□□ -1.33
Shf-201ENSMUST00000048635 Gpr98Q8VHN7 6298 aaKnown RBP6.67□□□□□ -1.34
Shf-201ENSMUST00000048635 Gm10024A0A0A0MQA4 119 aa6.64□□□□□ -1.35
Shf-201ENSMUST00000048635 AhnakE9Q616 5656 aaKnown RBP6.61□□□□□ -1.35
Shf-201ENSMUST00000048635 NebE9Q1W3 7152 aa6.57□□□□□ -1.36
Shf-201ENSMUST00000048635 Krtap28-13A0A087WQP5 138 aa6.22□□□□□ -1.41
Shf-201ENSMUST00000048635 A030005K14RikA0A1Y7VNY1 122 aa6.16□□□□□ -1.42
Shf-201ENSMUST00000048635 Krtap28-10A0A1Y7VP58 119 aa6.13□□□□□ -1.43
Shf-201ENSMUST00000048635 1110025L11RikO09048 78 aa6.11□□□□□ -1.43
Shf-201ENSMUST00000048635 Krtap6-5Q925H3 78 aa6.11□□□□□ -1.43
Shf-201ENSMUST00000048635 A0A1Y7VJ07 166 aa5.95□□□□□ -1.46
Shf-201ENSMUST00000048635 Krtap31-1Q9D644 177 aa5.91□□□□□ -1.46
Shf-201ENSMUST00000048635 Gm29735A0A1B0GT06 219 aa5.83□□□□□ -1.48
Shf-201ENSMUST00000048635 Gm9112A2AI92 75 aa5.8□□□□□ -1.48
Shf-201ENSMUST00000048635 Muc16A0A140LJ72 8478 aa5.7□□□□□ -1.5
Shf-201ENSMUST00000048635 A030014E15RikA0A1Y7VJV2 120 aa5.65□□□□□ -1.5
Shf-201ENSMUST00000048635 Gm7544A0A1Y7VJ58 118 aa5.51□□□□□ -1.53
Shf-201ENSMUST00000048635 Gm11567Q9D141 195 aa5.48□□□□□ -1.53
Shf-201ENSMUST00000048635 Gm10229O08631 77 aa5.46□□□□□ -1.54
Shf-201ENSMUST00000048635 Krtap31-2Q8CAY5 177 aa5.42□□□□□ -1.54
Shf-201ENSMUST00000048635 Sprr2bO70554 98 aa5.14□□□□□ -1.59
Shf-201ENSMUST00000048635 Krtap21-1Q925H4 128 aa4.95□□□□□ -1.62
Shf-201ENSMUST00000048635 Krtap6-2O08884 159 aa4.77□□□□□ -1.65
Shf-201ENSMUST00000048635 A0A286YCP9 139 aa4.55□□□□□ -1.68
Shf-201ENSMUST00000048635 A030003K21RikA0A1Y7VIM3 128 aa4.43□□□□□ -1.7
Shf-201ENSMUST00000048635 Gm6217A0A1Y7VJK9 128 aa4.26□□□□□ -1.73
Shf-201ENSMUST00000048635 Phgr1Q8K0G7 91 aa4.23□□□□□ -1.73
Shf-201ENSMUST00000048635 Krtap5-1Q64507 230 aa4.08□□□□□ -1.76
Shf-201ENSMUST00000048635 Gm4559A4IF42 199 aa3.33□□□□□ -1.88
Retrieved 80 of 22,080 RNA–protein pairs in 10.9 ms