RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Krtap20-2E9Q0A8 60 aa8,9□□□□□ -0,98
Shf-201ENSMUST00000048635 Syne1Q6ZWR6 8799 aa8,88□□□□□ -0,99
Shf-201ENSMUST00000048635 Sprr2iO70560 76 aa8,87□□□□□ -0,99
Shf-201ENSMUST00000048635 Lce1a1Q9CQH5 143 aa8,87□□□□□ -0,99
Shf-201ENSMUST00000048635 Krtap5-2Q9D5Z7 189 aa8,8□□□□□ -1
Shf-201ENSMUST00000048635 Lce1kJ3QP15 125 aa8,76□□□□□ -1,01
Shf-201ENSMUST00000048635 Gm11938Q9D3H4 131 aa8,75□□□□□ -1,01
Shf-201ENSMUST00000048635 Lce1eQ9D139 143 aa8,52□□□□□ -1,05
Shf-201ENSMUST00000048635 Gm11568A2A4M2 211 aa8,5□□□□□ -1,05
Shf-201ENSMUST00000048635 Krtap9-1Q64526 186 aa8,5□□□□□ -1,05
Shf-201ENSMUST00000048635 Lce1fB9EJP6 147 aa8,45□□□□□ -1,06
Shf-201ENSMUST00000048635 Lce1cQ9D1C5 147 aa8,45□□□□□ -1,06
Shf-201ENSMUST00000048635 Gm11559Q9D3H7 191 aa8,37□□□□□ -1,07
Shf-201ENSMUST00000048635 Gm4553A0A1B0GSA9 284 aa8,3□□□□□ -1,08
Shf-201ENSMUST00000048635 Gm20538F6Z9R1 75 aa8,28□□□□□ -1,08
Shf-201ENSMUST00000048635 Mt1P02802 61 aaKnown RBP8,28□□□□□ -1,08
Shf-201ENSMUST00000048635 Lce3cQ91V05 98 aa8,23□□□□□ -1,09
Shf-201ENSMUST00000048635 Sprr2dO70555 85 aa8,21□□□□□ -1,09
Shf-201ENSMUST00000048635 Lce3dE9Q8V1 98 aa8,13□□□□□ -1,11
Shf-201ENSMUST00000048635 Krtap19-4Q925H7 84 aa8,13□□□□□ -1,11
Shf-201ENSMUST00000048635 A030005L19RikA0A1Y7VIU2 113 aa8,11□□□□□ -1,11
Shf-201ENSMUST00000048635 Gm45337A0A1B0GS71 263 aa8,08□□□□□ -1,12
Shf-201ENSMUST00000048635 Gm10153A0A1B0GRL1 320 aa8,03□□□□□ -1,12
Shf-201ENSMUST00000048635 Gm11554B1AQB2 190 aa8,02□□□□□ -1,13
Shf-201ENSMUST00000048635 Lce3eF8VQJ0 98 aa7,98□□□□□ -1,13
Shf-201ENSMUST00000048635 Lce3fQ6PAI4 98 aa7,98□□□□□ -1,13
Shf-201ENSMUST00000048635 Gm2431E9Q8S1 172 aa7,97□□□□□ -1,13
Shf-201ENSMUST00000048635 Macf1Q9QXZ0 7354 aaKnown RBP7,92□□□□□ -1,14
Shf-201ENSMUST00000048635 Kmt2dQ6PDK2 5588 aa7,84□□□□□ -1,15
Shf-201ENSMUST00000048635 Gm40460A0A1B0GR10 244 aa7,82□□□□□ -1,16
Shf-201ENSMUST00000048635 Gm7579A0A1B0GRJ4 243 aa7,82□□□□□ -1,16
Shf-201ENSMUST00000048635 Krtap5-5Q2TA51 241 aa7,82□□□□□ -1,16
Shf-201ENSMUST00000048635 Krtap5-4Q62220 223 aa7,82□□□□□ -1,16
Shf-201ENSMUST00000048635 ObscnA2AAJ9 8891 aaKnown RBP7,81□□□□□ -1,16
Shf-201ENSMUST00000048635 4933428G20RikQ9D3X4 101 aa7,8□□□□□ -1,16
Shf-201ENSMUST00000048635 Eppk1Q8R0W0 6548 aa7,72□□□□□ -1,17
Shf-201ENSMUST00000048635 Lce3aQ497I5 98 aa7,64□□□□□ -1,19
Shf-201ENSMUST00000048635 Mt3P28184 68 aa7,61□□□□□ -1,19
Shf-201ENSMUST00000048635 Hmcn1D3YXG0 5634 aa7,57□□□□□ -1,2
Shf-201ENSMUST00000048635 Gm39115A0A1B0GSH7 232 aa7,52□□□□□ -1,2
Shf-201ENSMUST00000048635 Gm10100J3QK64 120 aa7,52□□□□□ -1,21
Shf-201ENSMUST00000048635 Gm10142J3KMP7 120 aa7,28□□□□□ -1,24
Shf-201ENSMUST00000048635 Ndufaf8A2AMZ4 74 aa7,23□□□□□ -1,25
Shf-201ENSMUST00000048635 A0A1Y7VLE6 161 aa7,19□□□□□ -1,26
Shf-201ENSMUST00000048635 Muc19Q6PZE0 7524 aa7,16□□□□□ -1,26
Shf-201ENSMUST00000048635 Gm11639A0A1D5RLM8 5808 aa7,16□□□□□ -1,26
Shf-201ENSMUST00000048635 DstQ91ZU6 7393 aaKnown RBP7,08□□□□□ -1,28
Shf-201ENSMUST00000048635 Sprr2hO70559 108 aa7,06□□□□□ -1,28
Shf-201ENSMUST00000048635 Sprr2fO70557 76 aa6,93□□□□□ -1,3
Shf-201ENSMUST00000048635 Gm45618A0A1B0GSA0 219 aa6,87□□□□□ -1,31
Shf-201ENSMUST00000048635 Krtap4-16Q91W93 202 aa6,77□□□□□ -1,33
Shf-201ENSMUST00000048635 Sprr2eO70556 76 aa6,72□□□□□ -1,33
Shf-201ENSMUST00000048635 Gpr98Q8VHN7 6298 aaKnown RBP6,67□□□□□ -1,34
Shf-201ENSMUST00000048635 Gm10024A0A0A0MQA4 119 aa6,64□□□□□ -1,35
Shf-201ENSMUST00000048635 AhnakE9Q616 5656 aaKnown RBP6,61□□□□□ -1,35
Shf-201ENSMUST00000048635 NebE9Q1W3 7152 aa6,57□□□□□ -1,36
Shf-201ENSMUST00000048635 Krtap28-13A0A087WQP5 138 aa6,22□□□□□ -1,41
Shf-201ENSMUST00000048635 A030005K14RikA0A1Y7VNY1 122 aa6,16□□□□□ -1,42
Shf-201ENSMUST00000048635 Krtap28-10A0A1Y7VP58 119 aa6,13□□□□□ -1,43
Shf-201ENSMUST00000048635 1110025L11RikO09048 78 aa6,11□□□□□ -1,43
Shf-201ENSMUST00000048635 Krtap6-5Q925H3 78 aa6,11□□□□□ -1,43
Shf-201ENSMUST00000048635 A0A1Y7VJ07 166 aa5,95□□□□□ -1,46
Shf-201ENSMUST00000048635 Krtap31-1Q9D644 177 aa5,91□□□□□ -1,46
Shf-201ENSMUST00000048635 Gm29735A0A1B0GT06 219 aa5,83□□□□□ -1,48
Shf-201ENSMUST00000048635 Gm9112A2AI92 75 aa5,8□□□□□ -1,48
Shf-201ENSMUST00000048635 Muc16A0A140LJ72 8478 aa5,7□□□□□ -1,5
Shf-201ENSMUST00000048635 A030014E15RikA0A1Y7VJV2 120 aa5,65□□□□□ -1,5
Shf-201ENSMUST00000048635 Gm7544A0A1Y7VJ58 118 aa5,51□□□□□ -1,53
Shf-201ENSMUST00000048635 Gm11567Q9D141 195 aa5,48□□□□□ -1,53
Shf-201ENSMUST00000048635 Gm10229O08631 77 aa5,46□□□□□ -1,54
Shf-201ENSMUST00000048635 Krtap31-2Q8CAY5 177 aa5,42□□□□□ -1,54
Shf-201ENSMUST00000048635 Sprr2bO70554 98 aa5,14□□□□□ -1,59
Shf-201ENSMUST00000048635 Krtap21-1Q925H4 128 aa4,95□□□□□ -1,62
Shf-201ENSMUST00000048635 Krtap6-2O08884 159 aa4,77□□□□□ -1,65
Shf-201ENSMUST00000048635 A0A286YCP9 139 aa4,55□□□□□ -1,68
Shf-201ENSMUST00000048635 A030003K21RikA0A1Y7VIM3 128 aa4,43□□□□□ -1,7
Shf-201ENSMUST00000048635 Gm6217A0A1Y7VJK9 128 aa4,26□□□□□ -1,73
Shf-201ENSMUST00000048635 Phgr1Q8K0G7 91 aa4,23□□□□□ -1,73
Shf-201ENSMUST00000048635 Krtap5-1Q64507 230 aa4,08□□□□□ -1,76
Shf-201ENSMUST00000048635 Gm4559A4IF42 199 aa3,33□□□□□ -1,88
Retrieved 80 of 22,080 RNA–protein pairs in 9,7 ms