RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Krtap4-7Q9D732 168 aa7.74□□□□□ -1.17
Upf3a-201ENSMUST00000043767 Sprr2dO70555 85 aa7.7□□□□□ -1.18
Upf3a-201ENSMUST00000043767 Krtap6-3A0A087WQL6 57 aa7.66□□□□□ -1.18
Upf3a-201ENSMUST00000043767 Lce1lQ9D1G7 135 aa7.63□□□□□ -1.19
Upf3a-201ENSMUST00000043767 Gm11938Q9D3H4 131 aa7.62□□□□□ -1.19
Upf3a-201ENSMUST00000043767 Lce1eQ9D139 143 aa7.59□□□□□ -1.19
Upf3a-201ENSMUST00000043767 Lce3bQ9CQM7 98 aa7.58□□□□□ -1.2
Upf3a-201ENSMUST00000043767 A0A1Y7VJH8 109 aa7.38□□□□□ -1.23
Upf3a-201ENSMUST00000043767 Lce1kJ3QP15 125 aa7.35□□□□□ -1.23
Upf3a-201ENSMUST00000043767 Sprr2iO70560 76 aa7.3□□□□□ -1.24
Upf3a-201ENSMUST00000043767 Krtap20-2E9Q0A8 60 aa7.29□□□□□ -1.24
Upf3a-201ENSMUST00000043767 Lce1cQ9D1C5 147 aa7.16□□□□□ -1.26
Upf3a-201ENSMUST00000043767 Krtap19-4Q925H7 84 aa7.16□□□□□ -1.26
Upf3a-201ENSMUST00000043767 Krtap5-2Q9D5Z7 189 aa7.16□□□□□ -1.26
Upf3a-201ENSMUST00000043767 Lce1a1Q9CQH5 143 aa7.15□□□□□ -1.27
Upf3a-201ENSMUST00000043767 Gm11568A2A4M2 211 aa7.12□□□□□ -1.27
Upf3a-201ENSMUST00000043767 Krtap9-1Q64526 186 aa7.12□□□□□ -1.27
Upf3a-201ENSMUST00000043767 Lce1fB9EJP6 147 aa7.09□□□□□ -1.27
Upf3a-201ENSMUST00000043767 Lce3cQ91V05 98 aa7.04□□□□□ -1.28
Upf3a-201ENSMUST00000043767 Gm10100J3QK64 120 aa7□□□□□ -1.29
Upf3a-201ENSMUST00000043767 Mt1P02802 61 aaKnown RBP6.98□□□□□ -1.29
Upf3a-201ENSMUST00000043767 Lce3dE9Q8V1 98 aa6.91□□□□□ -1.3
Upf3a-201ENSMUST00000043767 Gm10142J3KMP7 120 aa6.89□□□□□ -1.31
Upf3a-201ENSMUST00000043767 Lce3eF8VQJ0 98 aa6.88□□□□□ -1.31
Upf3a-201ENSMUST00000043767 Lce3fQ6PAI4 98 aa6.88□□□□□ -1.31
Upf3a-201ENSMUST00000043767 ObscnA2AAJ9 8891 aaKnown RBP6.86□□□□□ -1.31
Upf3a-201ENSMUST00000043767 Macf1Q9QXZ0 7354 aaKnown RBP6.8□□□□□ -1.32
Upf3a-201ENSMUST00000043767 Gm11559Q9D3H7 191 aa6.76□□□□□ -1.33
Upf3a-201ENSMUST00000043767 Sprr2hO70559 108 aa6.72□□□□□ -1.33
Upf3a-201ENSMUST00000043767 Gm4553A0A1B0GSA9 284 aa6.69□□□□□ -1.34
Upf3a-201ENSMUST00000043767 Gm10153A0A1B0GRL1 320 aa6.66□□□□□ -1.34
Upf3a-201ENSMUST00000043767 Sprr2eO70556 76 aa6.65□□□□□ -1.35
Upf3a-201ENSMUST00000043767 Gm11554B1AQB2 190 aa6.61□□□□□ -1.35
Upf3a-201ENSMUST00000043767 Lce3aQ497I5 98 aa6.57□□□□□ -1.36
Upf3a-201ENSMUST00000043767 Gm45337A0A1B0GS71 263 aa6.54□□□□□ -1.36
Upf3a-201ENSMUST00000043767 Gm2431E9Q8S1 172 aa6.5□□□□□ -1.37
Upf3a-201ENSMUST00000043767 Sprr2fO70557 76 aa6.5□□□□□ -1.37
Upf3a-201ENSMUST00000043767 Hmcn1D3YXG0 5634 aa6.43□□□□□ -1.38
Upf3a-201ENSMUST00000043767 Kmt2dQ6PDK2 5588 aa6.35□□□□□ -1.39
Upf3a-201ENSMUST00000043767 Gm40460A0A1B0GR10 244 aa6.32□□□□□ -1.4
Upf3a-201ENSMUST00000043767 Gm7579A0A1B0GRJ4 243 aa6.32□□□□□ -1.4
Upf3a-201ENSMUST00000043767 Krtap5-5Q2TA51 241 aa6.32□□□□□ -1.4
Upf3a-201ENSMUST00000043767 Krtap5-4Q62220 223 aa6.32□□□□□ -1.4
Upf3a-201ENSMUST00000043767 A030005L19RikA0A1Y7VIU2 113 aa6.29□□□□□ -1.4
Upf3a-201ENSMUST00000043767 Mt3P28184 68 aa6.29□□□□□ -1.4
Upf3a-201ENSMUST00000043767 Krtap31-1Q9D644 177 aa6.27□□□□□ -1.41
Upf3a-201ENSMUST00000043767 A0A1Y7VLE6 161 aa6.17□□□□□ -1.42
Upf3a-201ENSMUST00000043767 Eppk1Q8R0W0 6548 aa6.15□□□□□ -1.43
Upf3a-201ENSMUST00000043767 Gm39115A0A1B0GSH7 232 aa6.01□□□□□ -1.45
Upf3a-201ENSMUST00000043767 Muc19Q6PZE0 7524 aa5.99□□□□□ -1.45
Upf3a-201ENSMUST00000043767 DstQ91ZU6 7393 aaKnown RBP5.89□□□□□ -1.47
Upf3a-201ENSMUST00000043767 Krtap4-16Q91W93 202 aa5.86□□□□□ -1.47
Upf3a-201ENSMUST00000043767 Gm11639A0A1D5RLM8 5808 aa5.83□□□□□ -1.48
Upf3a-201ENSMUST00000043767 Gm10024A0A0A0MQA4 119 aa5.58□□□□□ -1.52
Upf3a-201ENSMUST00000043767 AhnakE9Q616 5656 aaKnown RBP5.46□□□□□ -1.54
Upf3a-201ENSMUST00000043767 NebE9Q1W3 7152 aa5.44□□□□□ -1.54
Upf3a-201ENSMUST00000043767 Gm45618A0A1B0GSA0 219 aa5.35□□□□□ -1.55
Upf3a-201ENSMUST00000043767 Gpr98Q8VHN7 6298 aaKnown RBP5.34□□□□□ -1.55
Upf3a-201ENSMUST00000043767 Muc16A0A140LJ72 8478 aa5.34□□□□□ -1.56
Upf3a-201ENSMUST00000043767 Krtap28-13A0A087WQP5 138 aa5.19□□□□□ -1.58
Upf3a-201ENSMUST00000043767 Krtap28-10A0A1Y7VP58 119 aa5.17□□□□□ -1.58
Upf3a-201ENSMUST00000043767 1110025L11RikO09048 78 aa5.17□□□□□ -1.58
Upf3a-201ENSMUST00000043767 Krtap6-5Q925H3 78 aa5.17□□□□□ -1.58
Upf3a-201ENSMUST00000043767 Gm7544A0A1Y7VJ58 118 aa5.13□□□□□ -1.59
Upf3a-201ENSMUST00000043767 A030005K14RikA0A1Y7VNY1 122 aa5.12□□□□□ -1.59
Upf3a-201ENSMUST00000043767 A0A1Y7VJ07 166 aa5.06□□□□□ -1.6
Upf3a-201ENSMUST00000043767 Gm29735A0A1B0GT06 219 aa4.71□□□□□ -1.65
Upf3a-201ENSMUST00000043767 A030014E15RikA0A1Y7VJV2 120 aa4.7□□□□□ -1.66
Upf3a-201ENSMUST00000043767 Gm11567Q9D141 195 aa4.66□□□□□ -1.66
Upf3a-201ENSMUST00000043767 A0A286YCP9 139 aa4.65□□□□□ -1.67
Upf3a-201ENSMUST00000043767 Krtap31-2Q8CAY5 177 aa4.61□□□□□ -1.67
Upf3a-201ENSMUST00000043767 Gm10229O08631 77 aa4.6□□□□□ -1.67
Upf3a-201ENSMUST00000043767 Sprr2bO70554 98 aa4.58□□□□□ -1.68
Upf3a-201ENSMUST00000043767 A030003K21RikA0A1Y7VIM3 128 aa4.49□□□□□ -1.69
Upf3a-201ENSMUST00000043767 Gm6217A0A1Y7VJK9 128 aa4.47□□□□□ -1.69
Upf3a-201ENSMUST00000043767 Krtap21-1Q925H4 128 aa4.22□□□□□ -1.73
Upf3a-201ENSMUST00000043767 Krtap6-2O08884 159 aa3.99□□□□□ -1.77
Upf3a-201ENSMUST00000043767 Phgr1Q8K0G7 91 aa3.93□□□□□ -1.78
Upf3a-201ENSMUST00000043767 Krtap5-1Q64507 230 aa3.23□□□□□ -1.89
Upf3a-201ENSMUST00000043767 Gm4559A4IF42 199 aa2.73□□□□□ -1.97
Retrieved 80 of 22,080 RNA–protein pairs in 128.3 ms