RNA–Protein interactions for RNA: ENSMUST00000034851.5

Chrna3-201, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chrna3, Length 4,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-201ENSMUST00000034851 Lce1bQ9D149 137 aa3.99□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Gm7544A0A1Y7VJ58 118 aa3.98□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Gm11938Q9D3H4 131 aa3.98□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Lce1fB9EJP6 147 aa3.98□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Lce1gQ9D195 139 aa3.98□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Lce1cQ9D1C5 147 aa3.98□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Lce1lQ9D1G7 135 aa3.98□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Sprr2iO70560 76 aa3.97□□□□□ -1.77
Chrna3-201ENSMUST00000034851 Sprr2dO70555 85 aa3.97□□□□□ -1.77
Chrna3-201ENSMUST00000034851 A030005L19RikA0A1Y7VIU2 113 aa3.95□□□□□ -1.78
Chrna3-201ENSMUST00000034851 Gm6217A0A1Y7VJK9 128 aa3.95□□□□□ -1.78
Chrna3-201ENSMUST00000034851 Krtap28-13A0A087WQP5 138 aa3.93□□□□□ -1.78
Chrna3-201ENSMUST00000034851 Muc16A0A140LJ72 8478 aa3.92□□□□□ -1.78
Chrna3-201ENSMUST00000034851 Lce1eQ9D139 143 aa3.9□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Gm11562A0PK51 136 aa3.88□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Gm11564A2A4L9 201 aa3.87□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Gm11563B1AQ90 168 aa3.87□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Gm11595B1AQA7 289 aa3.87□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Krtap4-8B1AQA8 209 aa3.87□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Gm11596B1AQB0 205 aa3.87□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Krtap4-9B1AQA9 244 aa3.86□□□□□ -1.79
Chrna3-201ENSMUST00000034851 A030005K14RikA0A1Y7VNY1 122 aa3.86□□□□□ -1.79
Chrna3-201ENSMUST00000034851 Syne2Q6ZWQ0 6874 aaKnown RBP3.82□□□□□ -1.8
Chrna3-201ENSMUST00000034851 2300003K06RikA2A4M0 262 aa3.78□□□□□ -1.8
Chrna3-201ENSMUST00000034851 Krtap4-13Q9D7P3 165 aa3.76□□□□□ -1.81
Chrna3-201ENSMUST00000034851 Krtap4-7Q9D732 168 aa3.69□□□□□ -1.82
Chrna3-201ENSMUST00000034851 Lce1kJ3QP15 125 aa3.68□□□□□ -1.82
Chrna3-201ENSMUST00000034851 Lce1a1Q9CQH5 143 aa3.68□□□□□ -1.82
Chrna3-201ENSMUST00000034851 ObscnA2AAJ9 8891 aaKnown RBP3.68□□□□□ -1.82
Chrna3-201ENSMUST00000034851 A0A1Y7VJ07 166 aa3.68□□□□□ -1.82
Chrna3-201ENSMUST00000034851 Gm10024A0A0A0MQA4 119 aa3.67□□□□□ -1.82
Chrna3-201ENSMUST00000034851 Krtap31-1Q9D644 177 aa3.61□□□□□ -1.83
Chrna3-201ENSMUST00000034851 Sprr2hO70559 108 aa3.59□□□□□ -1.83
Chrna3-201ENSMUST00000034851 Sprr2eO70556 76 aa3.57□□□□□ -1.84
Chrna3-201ENSMUST00000034851 Macf1Q9QXZ0 7354 aaKnown RBP3.54□□□□□ -1.84
Chrna3-201ENSMUST00000034851 Sprr2fO70557 76 aa3.52□□□□□ -1.85
Chrna3-201ENSMUST00000034851 Gm11555B1AQ89 175 aa3.48□□□□□ -1.85
Chrna3-201ENSMUST00000034851 Krtap4-16Q91W93 202 aa3.44□□□□□ -1.86
Chrna3-201ENSMUST00000034851 Mt1P02802 61 aaKnown RBP3.41□□□□□ -1.86
Chrna3-201ENSMUST00000034851 Krtap20-2E9Q0A8 60 aa3.37□□□□□ -1.87
Chrna3-201ENSMUST00000034851 Mt3P28184 68 aa3.32□□□□□ -1.88
Chrna3-201ENSMUST00000034851 Krtap6-3A0A087WQL6 57 aa3.28□□□□□ -1.88
Chrna3-201ENSMUST00000034851 A030014E15RikA0A1Y7VJV2 120 aa3.28□□□□□ -1.88
Chrna3-201ENSMUST00000034851 Krtap31-2Q8CAY5 177 aa3.23□□□□□ -1.89
Chrna3-201ENSMUST00000034851 Gm11554B1AQB2 190 aa3.22□□□□□ -1.89
Chrna3-201ENSMUST00000034851 Muc19Q6PZE0 7524 aa3.18□□□□□ -1.9
Chrna3-201ENSMUST00000034851 DstQ91ZU6 7393 aaKnown RBP3.06□□□□□ -1.92
Chrna3-201ENSMUST00000034851 Gm11568A2A4M2 211 aa3.03□□□□□ -1.92
Chrna3-201ENSMUST00000034851 Krtap9-1Q64526 186 aa3.03□□□□□ -1.92
Chrna3-201ENSMUST00000034851 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Chrna3-201ENSMUST00000034851 Kmt2dQ6PDK2 5588 aa2.96□□□□□ -1.94
Chrna3-201ENSMUST00000034851 Hmcn1D3YXG0 5634 aa2.8□□□□□ -1.96
Chrna3-201ENSMUST00000034851 Krtap5-2Q9D5Z7 189 aa2.79□□□□□ -1.96
Chrna3-201ENSMUST00000034851 Gm11559Q9D3H7 191 aa2.78□□□□□ -1.96
Chrna3-201ENSMUST00000034851 1110025L11RikO09048 78 aa2.72□□□□□ -1.97
Chrna3-201ENSMUST00000034851 Krtap6-5Q925H3 78 aa2.72□□□□□ -1.97
Chrna3-201ENSMUST00000034851 A0A286YCP9 139 aa2.7□□□□□ -1.98
Chrna3-201ENSMUST00000034851 Sprr2bO70554 98 aa2.63□□□□□ -1.99
Chrna3-201ENSMUST00000034851 Eppk1Q8R0W0 6548 aa2.58□□□□□ -2
Chrna3-201ENSMUST00000034851 Gm10153A0A1B0GRL1 320 aa2.58□□□□□ -2
Chrna3-201ENSMUST00000034851 Gm4553A0A1B0GSA9 284 aa2.58□□□□□ -2
Chrna3-201ENSMUST00000034851 Gm11639A0A1D5RLM8 5808 aa2.57□□□□□ -2
Chrna3-201ENSMUST00000034851 Gpr98Q8VHN7 6298 aaKnown RBP2.53□□□□□ -2
Chrna3-201ENSMUST00000034851 Gm2431E9Q8S1 172 aa2.5□□□□□ -2.01
Chrna3-201ENSMUST00000034851 Gm10229O08631 77 aa2.48□□□□□ -2.01
Chrna3-201ENSMUST00000034851 Gm45337A0A1B0GS71 263 aa2.41□□□□□ -2.02
Chrna3-201ENSMUST00000034851 AhnakE9Q616 5656 aaKnown RBP2.35□□□□□ -2.03
Chrna3-201ENSMUST00000034851 Gm40460A0A1B0GR10 244 aa2.34□□□□□ -2.03
Chrna3-201ENSMUST00000034851 Gm7579A0A1B0GRJ4 243 aa2.34□□□□□ -2.03
Chrna3-201ENSMUST00000034851 Krtap5-5Q2TA51 241 aa2.34□□□□□ -2.03
Chrna3-201ENSMUST00000034851 Krtap5-4Q62220 223 aa2.34□□□□□ -2.03
Chrna3-201ENSMUST00000034851 Phgr1Q8K0G7 91 aa2.28□□□□□ -2.05
Chrna3-201ENSMUST00000034851 Gm39115A0A1B0GSH7 232 aa2.14□□□□□ -2.07
Chrna3-201ENSMUST00000034851 Krtap21-1Q925H4 128 aa2.09□□□□□ -2.08
Chrna3-201ENSMUST00000034851 Krtap6-2O08884 159 aa2.06□□□□□ -2.08
Chrna3-201ENSMUST00000034851 Gm11567Q9D141 195 aa2.01□□□□□ -2.09
Chrna3-201ENSMUST00000034851 Gm45618A0A1B0GSA0 219 aa1.81□□□□□ -2.12
Chrna3-201ENSMUST00000034851 Gm29735A0A1B0GT06 219 aa1.76□□□□□ -2.13
Chrna3-201ENSMUST00000034851 Krtap5-1Q64507 230 aa1.32□□□□□ -2.2
Chrna3-201ENSMUST00000034851 Gm4559A4IF42 199 aa1.09□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 240.3 ms