RNA–Protein interactions for RNA: ENSMUST00000034053.6

Pdlim3-201, Transcript of PDZ and LIM domain protein 3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pdlim3, Length 1,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3-201ENSMUST00000034053 Krtap6-3A0A087WQL6 57 aa5.14□□□□□ -1.59
Pdlim3-201ENSMUST00000034053 Gm20538F6Z9R1 75 aa5.1□□□□□ -1.59
Pdlim3-201ENSMUST00000034053 2310046K23RikA0A0A6YVW6 87 aa5.09□□□□□ -1.59
Pdlim3-201ENSMUST00000034053 Krtap4-13Q9D7P3 165 aa5.09□□□□□ -1.59
Pdlim3-201ENSMUST00000034053 Lce1bQ9D149 137 aa5.07□□□□□ -1.6
Pdlim3-201ENSMUST00000034053 Gm38119A0A0A6YX29 146 aa4.97□□□□□ -1.61
Pdlim3-201ENSMUST00000034053 Sprr2kO70562 68 aa4.97□□□□□ -1.61
Pdlim3-201ENSMUST00000034053 Lce1lQ9D1G7 135 aa4.94□□□□□ -1.62
Pdlim3-201ENSMUST00000034053 Gm10272F7CZ33 110 aa4.91□□□□□ -1.62
Pdlim3-201ENSMUST00000034053 2300003K06RikA2A4M0 262 aa4.9□□□□□ -1.63
Pdlim3-201ENSMUST00000034053 Lce1a1Q9CQH5 143 aa4.77□□□□□ -1.65
Pdlim3-201ENSMUST00000034053 Syne1Q6ZWR6 8799 aa4.76□□□□□ -1.65
Pdlim3-201ENSMUST00000034053 Ndufaf8A2AMZ4 74 aa4.73□□□□□ -1.65
Pdlim3-201ENSMUST00000034053 Krtap20-2E9Q0A8 60 aa4.7□□□□□ -1.66
Pdlim3-201ENSMUST00000034053 Lce1eQ9D139 143 aa4.7□□□□□ -1.66
Pdlim3-201ENSMUST00000034053 Gm11938Q9D3H4 131 aa4.7□□□□□ -1.66
Pdlim3-201ENSMUST00000034053 Sprr2gO70558 76 aa4.66□□□□□ -1.66
Pdlim3-201ENSMUST00000034053 Lce3bQ9CQM7 98 aa4.61□□□□□ -1.67
Pdlim3-201ENSMUST00000034053 Sprr2dO70555 85 aa4.58□□□□□ -1.68
Pdlim3-201ENSMUST00000034053 Eppk1Q8R0W0 6548 aa4.5□□□□□ -1.69
Pdlim3-201ENSMUST00000034053 Sprr2iO70560 76 aa4.5□□□□□ -1.69
Pdlim3-201ENSMUST00000034053 Lce1kJ3QP15 125 aa4.49□□□□□ -1.69
Pdlim3-201ENSMUST00000034053 Lce1cQ9D1C5 147 aa4.45□□□□□ -1.7
Pdlim3-201ENSMUST00000034053 Krtap5-2Q9D5Z7 189 aa4.45□□□□□ -1.7
Pdlim3-201ENSMUST00000034053 Krtap31-2Q8CAY5 177 aa4.42□□□□□ -1.7
Pdlim3-201ENSMUST00000034053 Krtap19-4Q925H7 84 aa4.41□□□□□ -1.7
Pdlim3-201ENSMUST00000034053 Gm11568A2A4M2 211 aa4.35□□□□□ -1.71
Pdlim3-201ENSMUST00000034053 Krtap9-1Q64526 186 aa4.35□□□□□ -1.71
Pdlim3-201ENSMUST00000034053 Lce1fB9EJP6 147 aa4.33□□□□□ -1.72
Pdlim3-201ENSMUST00000034053 Lce3cQ91V05 98 aa4.32□□□□□ -1.72
Pdlim3-201ENSMUST00000034053 Mt1P02802 61 aaKnown RBP4.28□□□□□ -1.72
Pdlim3-201ENSMUST00000034053 ObscnA2AAJ9 8891 aaKnown RBP4.28□□□□□ -1.72
Pdlim3-201ENSMUST00000034053 4933428G20RikQ9D3X4 101 aa4.28□□□□□ -1.72
Pdlim3-201ENSMUST00000034053 Gm45618A0A1B0GSA0 219 aa4.25□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Lce3dE9Q8V1 98 aa4.25□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Gm11559Q9D3H7 191 aa4.24□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Gm11639A0A1D5RLM8 5808 aa4.23□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Lce3eF8VQJ0 98 aa4.23□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Lce3fQ6PAI4 98 aa4.23□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Gm9112A2AI92 75 aa4.22□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Macf1Q9QXZ0 7354 aaKnown RBP4.22□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Gm11554B1AQB2 190 aa4.21□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Krtap31-1Q9D644 177 aa4.21□□□□□ -1.73
Pdlim3-201ENSMUST00000034053 Gm4553A0A1B0GSA9 284 aa4.17□□□□□ -1.74
Pdlim3-201ENSMUST00000034053 Gm10100J3QK64 120 aa4.17□□□□□ -1.74
Pdlim3-201ENSMUST00000034053 Gpr98Q8VHN7 6298 aaKnown RBP4.12□□□□□ -1.75
Pdlim3-201ENSMUST00000034053 Gm10153A0A1B0GRL1 320 aa4.1□□□□□ -1.75
Pdlim3-201ENSMUST00000034053 Gm45337A0A1B0GS71 263 aa4.07□□□□□ -1.76
Pdlim3-201ENSMUST00000034053 Kmt2dQ6PDK2 5588 aa4.06□□□□□ -1.76
Pdlim3-201ENSMUST00000034053 Gm10142J3KMP7 120 aa4.06□□□□□ -1.76
Pdlim3-201ENSMUST00000034053 Muc19Q6PZE0 7524 aa4.06□□□□□ -1.76
Pdlim3-201ENSMUST00000034053 Lce3aQ497I5 98 aa4.05□□□□□ -1.76
Pdlim3-201ENSMUST00000034053 Gm2431E9Q8S1 172 aa4.04□□□□□ -1.76
Pdlim3-201ENSMUST00000034053 Gm39115A0A1B0GSH7 232 aa4.01□□□□□ -1.77
Pdlim3-201ENSMUST00000034053 Sprr2hO70559 108 aa3.99□□□□□ -1.77
Pdlim3-201ENSMUST00000034053 Gm40460A0A1B0GR10 244 aa3.95□□□□□ -1.78
Pdlim3-201ENSMUST00000034053 Gm7579A0A1B0GRJ4 243 aa3.95□□□□□ -1.78
Pdlim3-201ENSMUST00000034053 Krtap5-5Q2TA51 241 aa3.95□□□□□ -1.78
Pdlim3-201ENSMUST00000034053 Krtap5-4Q62220 223 aa3.95□□□□□ -1.78
Pdlim3-201ENSMUST00000034053 Hmcn1D3YXG0 5634 aa3.91□□□□□ -1.78
Pdlim3-201ENSMUST00000034053 Gm29735A0A1B0GT06 219 aa3.86□□□□□ -1.79
Pdlim3-201ENSMUST00000034053 Mt3P28184 68 aa3.86□□□□□ -1.79
Pdlim3-201ENSMUST00000034053 Gm11567Q9D141 195 aa3.73□□□□□ -1.81
Pdlim3-201ENSMUST00000034053 NebE9Q1W3 7152 aa3.72□□□□□ -1.81
Pdlim3-201ENSMUST00000034053 DstQ91ZU6 7393 aaKnown RBP3.72□□□□□ -1.81
Pdlim3-201ENSMUST00000034053 Sprr2eO70556 76 aa3.72□□□□□ -1.81
Pdlim3-201ENSMUST00000034053 Krtap4-16Q91W93 202 aa3.68□□□□□ -1.82
Pdlim3-201ENSMUST00000034053 Sprr2fO70557 76 aa3.55□□□□□ -1.84
Pdlim3-201ENSMUST00000034053 Gm10024A0A0A0MQA4 119 aa3.44□□□□□ -1.86
Pdlim3-201ENSMUST00000034053 AhnakE9Q616 5656 aaKnown RBP3.41□□□□□ -1.86
Pdlim3-201ENSMUST00000034053 1110025L11RikO09048 78 aa3.19□□□□□ -1.9
Pdlim3-201ENSMUST00000034053 Krtap6-5Q925H3 78 aa3.19□□□□□ -1.9
Pdlim3-201ENSMUST00000034053 Muc16A0A140LJ72 8478 aa3.15□□□□□ -1.91
Pdlim3-201ENSMUST00000034053 Gm10229O08631 77 aa2.83□□□□□ -1.96
Pdlim3-201ENSMUST00000034053 Krtap5-1Q64507 230 aa2.79□□□□□ -1.96
Pdlim3-201ENSMUST00000034053 Gm4559A4IF42 199 aa2.76□□□□□ -1.97
Pdlim3-201ENSMUST00000034053 Sprr2bO70554 98 aa2.73□□□□□ -1.97
Pdlim3-201ENSMUST00000034053 Krtap21-1Q925H4 128 aa2.62□□□□□ -1.99
Pdlim3-201ENSMUST00000034053 Krtap6-2O08884 159 aa2.44□□□□□ -2.02
Pdlim3-201ENSMUST00000034053 Phgr1Q8K0G7 91 aa2.35□□□□□ -2.03
Retrieved 80 of 22,080 RNA–protein pairs in 91.2 ms