RNA–Protein interactions for RNA: ENSMUST00000033597.8

Hmgn5-201, Transcript of High mobility group nucleosome-binding domain-containing protein 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgn5, Length 1,934 nt, Biotype protein coding, Subcellular localisation Growth cone, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5-201ENSMUST00000033597 Krtap19-2Q925I0 141 aa2.99□□□□□ -1.93
Hmgn5-201ENSMUST00000033597 Gm4553A0A1B0GSA9 284 aa2.94□□□□□ -1.94
Hmgn5-201ENSMUST00000033597 Gm17402F6Z0L5 76 aa2.93□□□□□ -1.94
Hmgn5-201ENSMUST00000033597 Mt4P47945 62 aa2.93□□□□□ -1.94
Hmgn5-201ENSMUST00000033597 Gm21887J3QQ04 176 aa2.92□□□□□ -1.94
Hmgn5-201ENSMUST00000033597 Krtap1-5A2A590 122 aa2.91□□□□□ -1.94
Hmgn5-201ENSMUST00000033597 Gm19426M0QWC7 77 aa2.91□□□□□ -1.94
Hmgn5-201ENSMUST00000033597 Krtap7-1Q9D3I6 87 aa2.91□□□□□ -1.94
Hmgn5-201ENSMUST00000033597 Gm40193A0A1B0GT39 78 aa2.89□□□□□ -1.95
Hmgn5-201ENSMUST00000033597 Gm6358A0A087WPH4 74 aa2.88□□□□□ -1.95
Hmgn5-201ENSMUST00000033597 Krtap12-1Q9Z287 130 aa2.86□□□□□ -1.95
Hmgn5-201ENSMUST00000033597 BC029722A0A0N4SW31 51 aa2.85□□□□□ -1.95
Hmgn5-201ENSMUST00000033597 Prm2P07978 107 aa2.85□□□□□ -1.95
Hmgn5-201ENSMUST00000033597 Ndufaf8A2AMZ4 74 aa2.83□□□□□ -1.96
Hmgn5-201ENSMUST00000033597 Sprr2a3Q4KL71 83 aa2.79□□□□□ -1.96
Hmgn5-201ENSMUST00000033597 Krtap5-1Q64507 230 aa2.79□□□□□ -1.96
Hmgn5-201ENSMUST00000033597 Sprr2a1Q9CQK8 83 aa2.79□□□□□ -1.96
Hmgn5-201ENSMUST00000033597 Sprr2kO70562 68 aa2.78□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 Gm4559A4IF42 199 aa2.74□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 Krtap19-9aF8WH65 55 aa2.74□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 Krtap6-3A0A087WQL6 57 aa2.74□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 Gm11568A2A4M2 211 aa2.73□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 Krtap9-1Q64526 186 aa2.73□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 Krtap5-2Q9D5Z7 189 aa2.73□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 2300003K06RikA2A4M0 262 aa2.72□□□□□ -1.97
Hmgn5-201ENSMUST00000033597 Mt2P02798 61 aa2.7□□□□□ -1.98
Hmgn5-201ENSMUST00000033597 Spink7Q6IE32 76 aa2.7□□□□□ -1.98
Hmgn5-201ENSMUST00000033597 Krtap9-3Q3V2C1 136 aa2.7□□□□□ -1.98
Hmgn5-201ENSMUST00000033597 Krtap8-1O08633 61 aa2.67□□□□□ -1.98
Hmgn5-201ENSMUST00000033597 Gm7579A0A1B0GRJ4 243 aa2.6□□□□□ -1.99
Hmgn5-201ENSMUST00000033597 Gm9112A2AI92 75 aa2.6□□□□□ -1.99
Hmgn5-201ENSMUST00000033597 Camk2n1Q6QWF9 78 aa2.57□□□□□ -2
Hmgn5-201ENSMUST00000033597 Macf1Q9QXZ0 7354 aaKnown RBP2.56□□□□□ -2
Hmgn5-201ENSMUST00000033597 Sprr2gO70558 76 aa2.56□□□□□ -2
Hmgn5-201ENSMUST00000033597 Krtap22-2J3QNX6 67 aa2.54□□□□□ -2
Hmgn5-201ENSMUST00000033597 Tnp1P10856 55 aa2.53□□□□□ -2
Hmgn5-201ENSMUST00000033597 Gm10142J3KMP7 120 aa2.52□□□□□ -2.01
Hmgn5-201ENSMUST00000033597 2310046K23RikA0A0A6YVW6 87 aa2.51□□□□□ -2.01
Hmgn5-201ENSMUST00000033597 Krtap20-2E9Q0A8 60 aa2.47□□□□□ -2.01
Hmgn5-201ENSMUST00000033597 Krtap5-5Q2TA51 241 aa2.47□□□□□ -2.01
Hmgn5-201ENSMUST00000033597 Eppk1Q8R0W0 6548 aa2.46□□□□□ -2.02
Hmgn5-201ENSMUST00000033597 Hmcn1D3YXG0 5634 aa2.42□□□□□ -2.02
Hmgn5-201ENSMUST00000033597 Muc19Q6PZE0 7524 aa2.37□□□□□ -2.03
Hmgn5-201ENSMUST00000033597 Krtap19-9bQ99NG9 58 aa2.36□□□□□ -2.03
Hmgn5-201ENSMUST00000033597 Gm11639A0A1D5RLM8 5808 aa2.35□□□□□ -2.03
Hmgn5-201ENSMUST00000033597 Syne1Q6ZWR6 8799 aa2.3□□□□□ -2.04
Hmgn5-201ENSMUST00000033597 Sprr2iO70560 76 aa2.29□□□□□ -2.04
Hmgn5-201ENSMUST00000033597 Gm10272F7CZ33 110 aa2.28□□□□□ -2.04
Hmgn5-201ENSMUST00000033597 Gpr98Q8VHN7 6298 aaKnown RBP2.28□□□□□ -2.04
Hmgn5-201ENSMUST00000033597 Kmt2dQ6PDK2 5588 aa2.26□□□□□ -2.05
Hmgn5-201ENSMUST00000033597 Mt3P28184 68 aa2.26□□□□□ -2.05
Hmgn5-201ENSMUST00000033597 NebE9Q1W3 7152 aa2.24□□□□□ -2.05
Hmgn5-201ENSMUST00000033597 Lce3bQ9CQM7 98 aa2.2□□□□□ -2.06
Hmgn5-201ENSMUST00000033597 DstQ91ZU6 7393 aaKnown RBP2.19□□□□□ -2.06
Hmgn5-201ENSMUST00000033597 Gm40460A0A1B0GR10 244 aa2.18□□□□□ -2.06
Hmgn5-201ENSMUST00000033597 Sprr2dO70555 85 aa2.17□□□□□ -2.06
Hmgn5-201ENSMUST00000033597 4933428G20RikQ9D3X4 101 aa2.15□□□□□ -2.06
Hmgn5-201ENSMUST00000033597 Gm11938Q9D3H4 131 aa2.14□□□□□ -2.07
Hmgn5-201ENSMUST00000033597 Krtap19-4Q925H7 84 aa2.03□□□□□ -2.08
Hmgn5-201ENSMUST00000033597 Mt1P02802 61 aaKnown RBP1.98□□□□□ -2.09
Hmgn5-201ENSMUST00000033597 Krtap4-16Q91W93 202 aa1.95□□□□□ -2.1
Hmgn5-201ENSMUST00000033597 Lce3cQ91V05 98 aa1.94□□□□□ -2.1
Hmgn5-201ENSMUST00000033597 Sprr2fO70557 76 aa1.93□□□□□ -2.1
Hmgn5-201ENSMUST00000033597 AhnakE9Q616 5656 aaKnown RBP1.89□□□□□ -2.11
Hmgn5-201ENSMUST00000033597 Sprr2eO70556 76 aa1.89□□□□□ -2.11
Hmgn5-201ENSMUST00000033597 Sprr2hO70559 108 aa1.88□□□□□ -2.11
Hmgn5-201ENSMUST00000033597 Lce3dE9Q8V1 98 aa1.87□□□□□ -2.11
Hmgn5-201ENSMUST00000033597 Lce3eF8VQJ0 98 aa1.82□□□□□ -2.12
Hmgn5-201ENSMUST00000033597 Lce3fQ6PAI4 98 aa1.82□□□□□ -2.12
Hmgn5-201ENSMUST00000033597 ObscnA2AAJ9 8891 aaKnown RBP1.82□□□□□ -2.12
Hmgn5-201ENSMUST00000033597 Krtap6-5Q925H3 78 aa1.78□□□□□ -2.12
Hmgn5-201ENSMUST00000033597 Muc16A0A140LJ72 8478 aa1.74□□□□□ -2.13
Hmgn5-201ENSMUST00000033597 Lce3aQ497I5 98 aa1.74□□□□□ -2.13
Hmgn5-201ENSMUST00000033597 Gm10024A0A0A0MQA4 119 aa1.49□□□□□ -2.17
Hmgn5-201ENSMUST00000033597 Krtap6-2O08884 159 aa1.42□□□□□ -2.18
Hmgn5-201ENSMUST00000033597 1110025L11RikO09048 78 aa1.37□□□□□ -2.19
Hmgn5-201ENSMUST00000033597 Gm10229O08631 77 aa1.34□□□□□ -2.2
Hmgn5-201ENSMUST00000033597 Sprr2bO70554 98 aa1.28□□□□□ -2.2
Hmgn5-201ENSMUST00000033597 Phgr1Q8K0G7 91 aa1.09□□□□□ -2.23
Hmgn5-201ENSMUST00000033597 Krtap21-1Q925H4 128 aa1.09□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 65.6 ms