RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Lce3aQ497I5 98 aa3.47□□□□□ -1.85
Rnf40-201ENSMUST00000033088 Macf1Q9QXZ0 7354 aaKnown RBP3.46□□□□□ -1.86
Rnf40-201ENSMUST00000033088 Gm11938Q9D3H4 131 aa3.45□□□□□ -1.86
Rnf40-201ENSMUST00000033088 Krtap4-6Q3V4B7 195 aa3.44□□□□□ -1.86
Rnf40-201ENSMUST00000033088 Syne2Q6ZWQ0 6874 aaKnown RBP3.42□□□□□ -1.86
Rnf40-201ENSMUST00000033088 Krtap4-16Q91W93 202 aa3.42□□□□□ -1.86
Rnf40-201ENSMUST00000033088 Gm11596B1AQB0 205 aa3.35□□□□□ -1.87
Rnf40-201ENSMUST00000033088 Krtap31-1Q9D644 177 aa3.34□□□□□ -1.88
Rnf40-201ENSMUST00000033088 Lce1fB9EJP6 147 aa3.33□□□□□ -1.88
Rnf40-201ENSMUST00000033088 Lce1a1Q9CQH5 143 aa3.33□□□□□ -1.88
Rnf40-201ENSMUST00000033088 Muc19Q6PZE0 7524 aa3.31□□□□□ -1.88
Rnf40-201ENSMUST00000033088 Mt4P47945 62 aa3.3□□□□□ -1.88
Rnf40-201ENSMUST00000033088 Gm11562A0PK51 136 aa3.28□□□□□ -1.88
Rnf40-201ENSMUST00000033088 Lce1bQ9D149 137 aa3.27□□□□□ -1.89
Rnf40-201ENSMUST00000033088 Gm11564A2A4L9 201 aa3.27□□□□□ -1.89
Rnf40-201ENSMUST00000033088 Gm11595B1AQA7 289 aa3.27□□□□□ -1.89
Rnf40-201ENSMUST00000033088 Krtap4-8B1AQA8 209 aa3.27□□□□□ -1.89
Rnf40-201ENSMUST00000033088 Lce1lQ9D1G7 135 aa3.26□□□□□ -1.89
Rnf40-201ENSMUST00000033088 Sprr2dO70555 85 aa3.21□□□□□ -1.9
Rnf40-201ENSMUST00000033088 Krtap19-4Q925H7 84 aa3.21□□□□□ -1.9
Rnf40-201ENSMUST00000033088 Krtap4-9B1AQA9 244 aa3.19□□□□□ -1.9
Rnf40-201ENSMUST00000033088 Gm10024A0A0A0MQA4 119 aa3.17□□□□□ -1.9
Rnf40-201ENSMUST00000033088 Krtap4-13Q9D7P3 165 aa3.1□□□□□ -1.91
Rnf40-201ENSMUST00000033088 Sprr2fO70557 76 aa3.08□□□□□ -1.92
Rnf40-201ENSMUST00000033088 DstQ91ZU6 7393 aaKnown RBP3.08□□□□□ -1.92
Rnf40-201ENSMUST00000033088 Sprr2iO70560 76 aa3.08□□□□□ -1.92
Rnf40-201ENSMUST00000033088 Krtap31-2Q8CAY5 177 aa3.07□□□□□ -1.92
Rnf40-201ENSMUST00000033088 2300003K06RikA2A4M0 262 aa3.06□□□□□ -1.92
Rnf40-201ENSMUST00000033088 Sprr2hO70559 108 aa3.03□□□□□ -1.92
Rnf40-201ENSMUST00000033088 Sprr2eO70556 76 aa3.01□□□□□ -1.93
Rnf40-201ENSMUST00000033088 Lce1kJ3QP15 125 aa2.97□□□□□ -1.93
Rnf40-201ENSMUST00000033088 Krtap6-3A0A087WQL6 57 aa2.91□□□□□ -1.94
Rnf40-201ENSMUST00000033088 A0A1Y7VJH8 109 aa2.81□□□□□ -1.96
Rnf40-201ENSMUST00000033088 Krtap20-2E9Q0A8 60 aa2.79□□□□□ -1.96
Rnf40-201ENSMUST00000033088 Mt1P02802 61 aaKnown RBP2.79□□□□□ -1.96
Rnf40-201ENSMUST00000033088 NebE9Q1W3 7152 aa2.79□□□□□ -1.96
Rnf40-201ENSMUST00000033088 Krtap5-2Q9D5Z7 189 aa2.77□□□□□ -1.97
Rnf40-201ENSMUST00000033088 A0A1Y7VLE6 161 aa2.75□□□□□ -1.97
Rnf40-201ENSMUST00000033088 A030005K14RikA0A1Y7VNY1 122 aa2.75□□□□□ -1.97
Rnf40-201ENSMUST00000033088 Gm11568A2A4M2 211 aa2.75□□□□□ -1.97
Rnf40-201ENSMUST00000033088 Krtap9-1Q64526 186 aa2.75□□□□□ -1.97
Rnf40-201ENSMUST00000033088 Krtap28-13A0A087WQP5 138 aa2.74□□□□□ -1.97
Rnf40-201ENSMUST00000033088 Krtap28-10A0A1Y7VP58 119 aa2.66□□□□□ -1.98
Rnf40-201ENSMUST00000033088 Gm11554B1AQB2 190 aa2.64□□□□□ -1.99
Rnf40-201ENSMUST00000033088 Gm10153A0A1B0GRL1 320 aa2.59□□□□□ -1.99
Rnf40-201ENSMUST00000033088 Kmt2dQ6PDK2 5588 aa2.58□□□□□ -2
Rnf40-201ENSMUST00000033088 Gm4553A0A1B0GSA9 284 aa2.58□□□□□ -2
Rnf40-201ENSMUST00000033088 Gm11559Q9D3H7 191 aa2.58□□□□□ -2
Rnf40-201ENSMUST00000033088 Mt3P28184 68 aa2.54□□□□□ -2
Rnf40-201ENSMUST00000033088 A030014E15RikA0A1Y7VJV2 120 aa2.53□□□□□ -2
Rnf40-201ENSMUST00000033088 Gm45337A0A1B0GS71 263 aa2.53□□□□□ -2
Rnf40-201ENSMUST00000033088 A0A1Y7VJ07 166 aa2.5□□□□□ -2.01
Rnf40-201ENSMUST00000033088 Hmcn1D3YXG0 5634 aa2.48□□□□□ -2.01
Rnf40-201ENSMUST00000033088 Gm2431E9Q8S1 172 aa2.47□□□□□ -2.01
Rnf40-201ENSMUST00000033088 Gm40460A0A1B0GR10 244 aa2.45□□□□□ -2.02
Rnf40-201ENSMUST00000033088 Gm7579A0A1B0GRJ4 243 aa2.45□□□□□ -2.02
Rnf40-201ENSMUST00000033088 Krtap5-5Q2TA51 241 aa2.45□□□□□ -2.02
Rnf40-201ENSMUST00000033088 Krtap5-4Q62220 223 aa2.45□□□□□ -2.02
Rnf40-201ENSMUST00000033088 Gm7544A0A1Y7VJ58 118 aa2.43□□□□□ -2.02
Rnf40-201ENSMUST00000033088 Eppk1Q8R0W0 6548 aa2.4□□□□□ -2.03
Rnf40-201ENSMUST00000033088 A030005L19RikA0A1Y7VIU2 113 aa2.38□□□□□ -2.03
Rnf40-201ENSMUST00000033088 Gm39115A0A1B0GSH7 232 aa2.3□□□□□ -2.04
Rnf40-201ENSMUST00000033088 Gm11639A0A1D5RLM8 5808 aa2.2□□□□□ -2.06
Rnf40-201ENSMUST00000033088 Gpr98Q8VHN7 6298 aaKnown RBP2.18□□□□□ -2.06
Rnf40-201ENSMUST00000033088 Sprr2bO70554 98 aa2.16□□□□□ -2.06
Rnf40-201ENSMUST00000033088 1110025L11RikO09048 78 aa2.12□□□□□ -2.07
Rnf40-201ENSMUST00000033088 Krtap6-5Q925H3 78 aa2.12□□□□□ -2.07
Rnf40-201ENSMUST00000033088 AhnakE9Q616 5656 aaKnown RBP2.08□□□□□ -2.08
Rnf40-201ENSMUST00000033088 Phgr1Q8K0G7 91 aa2.08□□□□□ -2.08
Rnf40-201ENSMUST00000033088 A0A286YCP9 139 aa2.07□□□□□ -2.08
Rnf40-201ENSMUST00000033088 Gm45618A0A1B0GSA0 219 aa2.03□□□□□ -2.08
Rnf40-201ENSMUST00000033088 Gm10229O08631 77 aa1.95□□□□□ -2.1
Rnf40-201ENSMUST00000033088 Gm11567Q9D141 195 aa1.91□□□□□ -2.1
Rnf40-201ENSMUST00000033088 Gm29735A0A1B0GT06 219 aa1.84□□□□□ -2.11
Rnf40-201ENSMUST00000033088 A030003K21RikA0A1Y7VIM3 128 aa1.81□□□□□ -2.12
Rnf40-201ENSMUST00000033088 Gm6217A0A1Y7VJK9 128 aa1.76□□□□□ -2.13
Rnf40-201ENSMUST00000033088 Krtap21-1Q925H4 128 aa1.72□□□□□ -2.13
Rnf40-201ENSMUST00000033088 Krtap6-2O08884 159 aa1.61□□□□□ -2.15
Rnf40-201ENSMUST00000033088 Gm4559A4IF42 199 aa1.22□□□□□ -2.21
Rnf40-201ENSMUST00000033088 Krtap5-1Q64507 230 aa1.21□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 47.6 ms