RNA–Protein interactions for RNA: ENSMUST00000031894.12

Clcn1-201, Transcript of Chloride channel protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn1, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1-201ENSMUST00000031894 Krtap6-3A0A087WQL6 57 aa3.66□□□□□ -1.82
Clcn1-201ENSMUST00000031894 Syne1Q6ZWR6 8799 aa3.65□□□□□ -1.82
Clcn1-201ENSMUST00000031894 Lce1bQ9D149 137 aa3.63□□□□□ -1.83
Clcn1-201ENSMUST00000031894 Lce1dQ9D731 133 aa3.61□□□□□ -1.83
Clcn1-201ENSMUST00000031894 Gm10272F7CZ33 110 aa3.55□□□□□ -1.84
Clcn1-201ENSMUST00000031894 Lce1a1Q9CQH5 143 aa3.49□□□□□ -1.85
Clcn1-201ENSMUST00000031894 Macf1Q9QXZ0 7354 aaKnown RBP3.48□□□□□ -1.85
Clcn1-201ENSMUST00000031894 Muc16A0A140LJ72 8478 aa3.48□□□□□ -1.85
Clcn1-201ENSMUST00000031894 Gm10100J3QK64 120 aa3.48□□□□□ -1.85
Clcn1-201ENSMUST00000031894 Lce3bQ9CQM7 98 aa3.44□□□□□ -1.86
Clcn1-201ENSMUST00000031894 Lce1eQ9D139 143 aa3.43□□□□□ -1.86
Clcn1-201ENSMUST00000031894 Sprr2iO70560 76 aa3.4□□□□□ -1.86
Clcn1-201ENSMUST00000031894 Gm11938Q9D3H4 131 aa3.39□□□□□ -1.87
Clcn1-201ENSMUST00000031894 Krtap20-2E9Q0A8 60 aa3.38□□□□□ -1.87
Clcn1-201ENSMUST00000031894 Gm10142J3KMP7 120 aa3.36□□□□□ -1.87
Clcn1-201ENSMUST00000031894 Lce1kJ3QP15 125 aa3.36□□□□□ -1.87
Clcn1-201ENSMUST00000031894 Lce1cQ9D1C5 147 aa3.33□□□□□ -1.88
Clcn1-201ENSMUST00000031894 Sprr2dO70555 85 aa3.31□□□□□ -1.88
Clcn1-201ENSMUST00000031894 Lce3cQ91V05 98 aa3.3□□□□□ -1.88
Clcn1-201ENSMUST00000031894 Lce1fB9EJP6 147 aa3.27□□□□□ -1.89
Clcn1-201ENSMUST00000031894 Lce3dE9Q8V1 98 aa3.26□□□□□ -1.89
Clcn1-201ENSMUST00000031894 Gm11554B1AQB2 190 aa3.24□□□□□ -1.89
Clcn1-201ENSMUST00000031894 Lce3eF8VQJ0 98 aa3.16□□□□□ -1.9
Clcn1-201ENSMUST00000031894 Lce3fQ6PAI4 98 aa3.16□□□□□ -1.9
Clcn1-201ENSMUST00000031894 Krtap19-4Q925H7 84 aa3.14□□□□□ -1.91
Clcn1-201ENSMUST00000031894 Lce3aQ497I5 98 aa3.13□□□□□ -1.91
Clcn1-201ENSMUST00000031894 ObscnA2AAJ9 8891 aaKnown RBP3.11□□□□□ -1.91
Clcn1-201ENSMUST00000031894 Krtap4-16Q91W93 202 aa3.1□□□□□ -1.91
Clcn1-201ENSMUST00000031894 A0A1Y7VJH8 109 aa3.09□□□□□ -1.91
Clcn1-201ENSMUST00000031894 Gm11559Q9D3H7 191 aa3.08□□□□□ -1.92
Clcn1-201ENSMUST00000031894 Eppk1Q8R0W0 6548 aa3.08□□□□□ -1.92
Clcn1-201ENSMUST00000031894 Gm11568A2A4M2 211 aa3.07□□□□□ -1.92
Clcn1-201ENSMUST00000031894 Krtap9-1Q64526 186 aa3.07□□□□□ -1.92
Clcn1-201ENSMUST00000031894 Krtap5-2Q9D5Z7 189 aa3.07□□□□□ -1.92
Clcn1-201ENSMUST00000031894 Gm11639A0A1D5RLM8 5808 aa3□□□□□ -1.93
Clcn1-201ENSMUST00000031894 Kmt2dQ6PDK2 5588 aa2.99□□□□□ -1.93
Clcn1-201ENSMUST00000031894 NebE9Q1W3 7152 aa2.98□□□□□ -1.93
Clcn1-201ENSMUST00000031894 DstQ91ZU6 7393 aaKnown RBP2.98□□□□□ -1.93
Clcn1-201ENSMUST00000031894 Sprr2fO70557 76 aa2.97□□□□□ -1.93
Clcn1-201ENSMUST00000031894 Muc19Q6PZE0 7524 aa2.96□□□□□ -1.93
Clcn1-201ENSMUST00000031894 Mt1P02802 61 aaKnown RBP2.96□□□□□ -1.94
Clcn1-201ENSMUST00000031894 Sprr2hO70559 108 aa2.95□□□□□ -1.94
Clcn1-201ENSMUST00000031894 Gm4553A0A1B0GSA9 284 aa2.92□□□□□ -1.94
Clcn1-201ENSMUST00000031894 Hmcn1D3YXG0 5634 aa2.91□□□□□ -1.94
Clcn1-201ENSMUST00000031894 Gpr98Q8VHN7 6298 aaKnown RBP2.88□□□□□ -1.95
Clcn1-201ENSMUST00000031894 A030005L19RikA0A1Y7VIU2 113 aa2.88□□□□□ -1.95
Clcn1-201ENSMUST00000031894 Gm2431E9Q8S1 172 aa2.85□□□□□ -1.95
Clcn1-201ENSMUST00000031894 Sprr2eO70556 76 aa2.85□□□□□ -1.95
Clcn1-201ENSMUST00000031894 Mt3P28184 68 aa2.8□□□□□ -1.96
Clcn1-201ENSMUST00000031894 Gm10024A0A0A0MQA4 119 aa2.77□□□□□ -1.97
Clcn1-201ENSMUST00000031894 Gm45337A0A1B0GS71 263 aa2.75□□□□□ -1.97
Clcn1-201ENSMUST00000031894 Gm10153A0A1B0GRL1 320 aa2.75□□□□□ -1.97
Clcn1-201ENSMUST00000031894 Gm40460A0A1B0GR10 244 aa2.65□□□□□ -1.99
Clcn1-201ENSMUST00000031894 Gm7579A0A1B0GRJ4 243 aa2.65□□□□□ -1.99
Clcn1-201ENSMUST00000031894 Krtap5-5Q2TA51 241 aa2.65□□□□□ -1.99
Clcn1-201ENSMUST00000031894 Krtap5-4Q62220 223 aa2.65□□□□□ -1.99
Clcn1-201ENSMUST00000031894 Gm39115A0A1B0GSH7 232 aa2.59□□□□□ -2
Clcn1-201ENSMUST00000031894 AhnakE9Q616 5656 aaKnown RBP2.51□□□□□ -2.01
Clcn1-201ENSMUST00000031894 A0A1Y7VLE6 161 aa2.5□□□□□ -2.01
Clcn1-201ENSMUST00000031894 Gm45618A0A1B0GSA0 219 aa2.37□□□□□ -2.03
Clcn1-201ENSMUST00000031894 1110025L11RikO09048 78 aa2.18□□□□□ -2.06
Clcn1-201ENSMUST00000031894 Krtap6-5Q925H3 78 aa2.18□□□□□ -2.06
Clcn1-201ENSMUST00000031894 A0A1Y7VJ07 166 aa2.06□□□□□ -2.08
Clcn1-201ENSMUST00000031894 A0A286YCP9 139 aa2.03□□□□□ -2.09
Clcn1-201ENSMUST00000031894 Gm11567Q9D141 195 aa1.98□□□□□ -2.09
Clcn1-201ENSMUST00000031894 Gm10229O08631 77 aa1.97□□□□□ -2.09
Clcn1-201ENSMUST00000031894 Krtap28-13A0A087WQP5 138 aa1.96□□□□□ -2.1
Clcn1-201ENSMUST00000031894 Sprr2bO70554 98 aa1.95□□□□□ -2.1
Clcn1-201ENSMUST00000031894 Gm29735A0A1B0GT06 219 aa1.94□□□□□ -2.1
Clcn1-201ENSMUST00000031894 A030005K14RikA0A1Y7VNY1 122 aa1.92□□□□□ -2.1
Clcn1-201ENSMUST00000031894 Phgr1Q8K0G7 91 aa1.89□□□□□ -2.11
Clcn1-201ENSMUST00000031894 A030014E15RikA0A1Y7VJV2 120 aa1.75□□□□□ -2.13
Clcn1-201ENSMUST00000031894 Krtap6-2O08884 159 aa1.74□□□□□ -2.13
Clcn1-201ENSMUST00000031894 Krtap28-10A0A1Y7VP58 119 aa1.74□□□□□ -2.13
Clcn1-201ENSMUST00000031894 Gm7544A0A1Y7VJ58 118 aa1.73□□□□□ -2.13
Clcn1-201ENSMUST00000031894 Krtap21-1Q925H4 128 aa1.72□□□□□ -2.13
Clcn1-201ENSMUST00000031894 A030003K21RikA0A1Y7VIM3 128 aa1.54□□□□□ -2.16
Clcn1-201ENSMUST00000031894 Gm6217A0A1Y7VJK9 128 aa1.54□□□□□ -2.16
Clcn1-201ENSMUST00000031894 Krtap5-1Q64507 230 aa1.54□□□□□ -2.16
Clcn1-201ENSMUST00000031894 Gm4559A4IF42 199 aa1.12□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 41.8 ms