RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 2310046K23RikA0A0A6YVW6 87 aa2.76□□□□□ -1.97
Ccdc39-201ENSMUST00000029222 Gm11564A2A4L9 201 aa2.75□□□□□ -1.97
Ccdc39-201ENSMUST00000029222 Gm11595B1AQA7 289 aa2.75□□□□□ -1.97
Ccdc39-201ENSMUST00000029222 Krtap4-8B1AQA8 209 aa2.75□□□□□ -1.97
Ccdc39-201ENSMUST00000029222 Krtap4-9B1AQA9 244 aa2.72□□□□□ -1.97
Ccdc39-201ENSMUST00000029222 Lce3bQ9CQM7 98 aa2.67□□□□□ -1.98
Ccdc39-201ENSMUST00000029222 Krtap4-13Q9D7P3 165 aa2.64□□□□□ -1.99
Ccdc39-201ENSMUST00000029222 Lce1dQ9D731 133 aa2.63□□□□□ -1.99
Ccdc39-201ENSMUST00000029222 Syne1Q6ZWR6 8799 aa2.61□□□□□ -1.99
Ccdc39-201ENSMUST00000029222 2300003K06RikA2A4M0 262 aa2.61□□□□□ -1.99
Ccdc39-201ENSMUST00000029222 4933428G20RikQ9D3X4 101 aa2.6□□□□□ -1.99
Ccdc39-201ENSMUST00000029222 Sprr2gO70558 76 aa2.57□□□□□ -2
Ccdc39-201ENSMUST00000029222 Lce3cQ91V05 98 aa2.56□□□□□ -2
Ccdc39-201ENSMUST00000029222 Lce1lQ9D1G7 135 aa2.56□□□□□ -2
Ccdc39-201ENSMUST00000029222 Lce1bQ9D149 137 aa2.53□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Gm11562A0PK51 136 aa2.52□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Gm10100J3QK64 120 aa2.51□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Macf1Q9QXZ0 7354 aaKnown RBP2.5□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Lce3eF8VQJ0 98 aa2.5□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Lce3fQ6PAI4 98 aa2.5□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Sprr2iO70560 76 aa2.49□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Lce1fB9EJP6 147 aa2.48□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Lce1cQ9D1C5 147 aa2.48□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Lce1eQ9D139 143 aa2.47□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Gm45618A0A1B0GSA0 219 aa2.47□□□□□ -2.01
Ccdc39-201ENSMUST00000029222 Lce1kJ3QP15 125 aa2.46□□□□□ -2.02
Ccdc39-201ENSMUST00000029222 Gm11938Q9D3H4 131 aa2.46□□□□□ -2.02
Ccdc39-201ENSMUST00000029222 Lce3dE9Q8V1 98 aa2.45□□□□□ -2.02
Ccdc39-201ENSMUST00000029222 Muc16A0A140LJ72 8478 aa2.44□□□□□ -2.02
Ccdc39-201ENSMUST00000029222 Gm10142J3KMP7 120 aa2.42□□□□□ -2.02
Ccdc39-201ENSMUST00000029222 Sprr2dO70555 85 aa2.42□□□□□ -2.02
Ccdc39-201ENSMUST00000029222 Krtap19-4Q925H7 84 aa2.39□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 Lce3aQ497I5 98 aa2.39□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 ObscnA2AAJ9 8891 aaKnown RBP2.38□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 Krtap20-2E9Q0A8 60 aa2.36□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 Lce1a1Q9CQH5 143 aa2.36□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 Krtap31-2Q8CAY5 177 aa2.35□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 Hmcn1D3YXG0 5634 aa2.35□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 Krtap6-3A0A087WQL6 57 aa2.34□□□□□ -2.03
Ccdc39-201ENSMUST00000029222 Krtap31-1Q9D644 177 aa2.34□□□□□ -2.04
Ccdc39-201ENSMUST00000029222 Mt1P02802 61 aaKnown RBP2.25□□□□□ -2.05
Ccdc39-201ENSMUST00000029222 Gm39115A0A1B0GSH7 232 aa2.23□□□□□ -2.05
Ccdc39-201ENSMUST00000029222 Gm11554B1AQB2 190 aa2.23□□□□□ -2.05
Ccdc39-201ENSMUST00000029222 Gm11568A2A4M2 211 aa2.19□□□□□ -2.06
Ccdc39-201ENSMUST00000029222 Krtap9-1Q64526 186 aa2.19□□□□□ -2.06
Ccdc39-201ENSMUST00000029222 Muc19Q6PZE0 7524 aa2.18□□□□□ -2.06
Ccdc39-201ENSMUST00000029222 Sprr2hO70559 108 aa2.17□□□□□ -2.06
Ccdc39-201ENSMUST00000029222 Sprr2eO70556 76 aa2.12□□□□□ -2.07
Ccdc39-201ENSMUST00000029222 Sprr2fO70557 76 aa2.12□□□□□ -2.07
Ccdc39-201ENSMUST00000029222 DstQ91ZU6 7393 aaKnown RBP2.1□□□□□ -2.07
Ccdc39-201ENSMUST00000029222 Mt3P28184 68 aa2.1□□□□□ -2.07
Ccdc39-201ENSMUST00000029222 Krtap5-2Q9D5Z7 189 aa2.09□□□□□ -2.08
Ccdc39-201ENSMUST00000029222 Gm10024A0A0A0MQA4 119 aa2.08□□□□□ -2.08
Ccdc39-201ENSMUST00000029222 NebE9Q1W3 7152 aa2.07□□□□□ -2.08
Ccdc39-201ENSMUST00000029222 Kmt2dQ6PDK2 5588 aa2.07□□□□□ -2.08
Ccdc39-201ENSMUST00000029222 Gm11559Q9D3H7 191 aa2.04□□□□□ -2.08
Ccdc39-201ENSMUST00000029222 Krtap4-16Q91W93 202 aa2□□□□□ -2.09
Ccdc39-201ENSMUST00000029222 Gm10153A0A1B0GRL1 320 aa1.94□□□□□ -2.1
Ccdc39-201ENSMUST00000029222 Gm4553A0A1B0GSA9 284 aa1.93□□□□□ -2.1
Ccdc39-201ENSMUST00000029222 Gm29735A0A1B0GT06 219 aa1.92□□□□□ -2.1
Ccdc39-201ENSMUST00000029222 Gm2431E9Q8S1 172 aa1.91□□□□□ -2.1
Ccdc39-201ENSMUST00000029222 Gm11639A0A1D5RLM8 5808 aa1.9□□□□□ -2.1
Ccdc39-201ENSMUST00000029222 Eppk1Q8R0W0 6548 aa1.89□□□□□ -2.11
Ccdc39-201ENSMUST00000029222 Krtap5-1Q64507 230 aa1.86□□□□□ -2.11
Ccdc39-201ENSMUST00000029222 Gm45337A0A1B0GS71 263 aa1.84□□□□□ -2.11
Ccdc39-201ENSMUST00000029222 Gm11567Q9D141 195 aa1.8□□□□□ -2.12
Ccdc39-201ENSMUST00000029222 Gpr98Q8VHN7 6298 aaKnown RBP1.79□□□□□ -2.12
Ccdc39-201ENSMUST00000029222 Gm40460A0A1B0GR10 244 aa1.77□□□□□ -2.13
Ccdc39-201ENSMUST00000029222 Gm7579A0A1B0GRJ4 243 aa1.77□□□□□ -2.13
Ccdc39-201ENSMUST00000029222 Krtap5-5Q2TA51 241 aa1.77□□□□□ -2.13
Ccdc39-201ENSMUST00000029222 Krtap5-4Q62220 223 aa1.77□□□□□ -2.13
Ccdc39-201ENSMUST00000029222 1110025L11RikO09048 78 aa1.72□□□□□ -2.13
Ccdc39-201ENSMUST00000029222 Krtap6-5Q925H3 78 aa1.72□□□□□ -2.13
Ccdc39-201ENSMUST00000029222 Gm4559A4IF42 199 aa1.7□□□□□ -2.14
Ccdc39-201ENSMUST00000029222 AhnakE9Q616 5656 aaKnown RBP1.66□□□□□ -2.14
Ccdc39-201ENSMUST00000029222 Sprr2bO70554 98 aa1.56□□□□□ -2.16
Ccdc39-201ENSMUST00000029222 Gm10229O08631 77 aa1.55□□□□□ -2.16
Ccdc39-201ENSMUST00000029222 Krtap21-1Q925H4 128 aa1.36□□□□□ -2.19
Ccdc39-201ENSMUST00000029222 Krtap6-2O08884 159 aa1.33□□□□□ -2.2
Ccdc39-201ENSMUST00000029222 Phgr1Q8K0G7 91 aa1.31□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 42.9 ms