RNA–Protein interactions for RNA: ENSMUST00000027667.12

Pkp1-201, Transcript of Plakophilin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pkp1, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1-201ENSMUST00000027667 Gm11596B1AQB0 205 aa4.24□□□□□ -1.73
Pkp1-201ENSMUST00000027667 Gm11564A2A4L9 201 aa4.18□□□□□ -1.74
Pkp1-201ENSMUST00000027667 Gm11563B1AQ90 168 aa4.18□□□□□ -1.74
Pkp1-201ENSMUST00000027667 Gm11595B1AQA7 289 aa4.18□□□□□ -1.74
Pkp1-201ENSMUST00000027667 Krtap4-8B1AQA8 209 aa4.18□□□□□ -1.74
Pkp1-201ENSMUST00000027667 Lce1eQ9D139 143 aa4.18□□□□□ -1.74
Pkp1-201ENSMUST00000027667 Krtap4-9B1AQA9 244 aa4.17□□□□□ -1.74
Pkp1-201ENSMUST00000027667 Krtap19-4Q925H7 84 aa4.08□□□□□ -1.76
Pkp1-201ENSMUST00000027667 SspoQ8CG65 4998 aa4.08□□□□□ -1.76
Pkp1-201ENSMUST00000027667 Syne2Q6ZWQ0 6874 aaKnown RBP4.08□□□□□ -1.76
Pkp1-201ENSMUST00000027667 2300003K06RikA2A4M0 262 aa4.08□□□□□ -1.76
Pkp1-201ENSMUST00000027667 Krtap4-13Q9D7P3 165 aa4.04□□□□□ -1.76
Pkp1-201ENSMUST00000027667 Sprr2eO70556 76 aa4.03□□□□□ -1.76
Pkp1-201ENSMUST00000027667 Krtap4-7Q9D732 168 aa4.02□□□□□ -1.77
Pkp1-201ENSMUST00000027667 Sprr2fO70557 76 aa3.97□□□□□ -1.77
Pkp1-201ENSMUST00000027667 Muc16A0A140LJ72 8478 aa3.96□□□□□ -1.78
Pkp1-201ENSMUST00000027667 Gm10024A0A0A0MQA4 119 aa3.94□□□□□ -1.78
Pkp1-201ENSMUST00000027667 Lce1kJ3QP15 125 aa3.89□□□□□ -1.79
Pkp1-201ENSMUST00000027667 Gm11562A0PK51 136 aa3.85□□□□□ -1.79
Pkp1-201ENSMUST00000027667 Macf1Q9QXZ0 7354 aaKnown RBP3.82□□□□□ -1.8
Pkp1-201ENSMUST00000027667 Sprr2dO70555 85 aa3.8□□□□□ -1.8
Pkp1-201ENSMUST00000027667 Gm11938Q9D3H4 131 aa3.8□□□□□ -1.8
Pkp1-201ENSMUST00000027667 Krtap6-3A0A087WQL6 57 aa3.71□□□□□ -1.82
Pkp1-201ENSMUST00000027667 Lce1a1Q9CQH5 143 aa3.7□□□□□ -1.82
Pkp1-201ENSMUST00000027667 ObscnA2AAJ9 8891 aaKnown RBP3.63□□□□□ -1.83
Pkp1-201ENSMUST00000027667 Sprr2hO70559 108 aa3.61□□□□□ -1.83
Pkp1-201ENSMUST00000027667 Mt3P28184 68 aa3.6□□□□□ -1.83
Pkp1-201ENSMUST00000027667 Gm11555B1AQ89 175 aa3.59□□□□□ -1.84
Pkp1-201ENSMUST00000027667 Gm11554B1AQB2 190 aa3.55□□□□□ -1.84
Pkp1-201ENSMUST00000027667 Krtap20-2E9Q0A8 60 aa3.55□□□□□ -1.84
Pkp1-201ENSMUST00000027667 Krtap31-1Q9D644 177 aa3.53□□□□□ -1.84
Pkp1-201ENSMUST00000027667 DstQ91ZU6 7393 aaKnown RBP3.47□□□□□ -1.85
Pkp1-201ENSMUST00000027667 Mt1P02802 61 aaKnown RBP3.44□□□□□ -1.86
Pkp1-201ENSMUST00000027667 NebE9Q1W3 7152 aa3.38□□□□□ -1.87
Pkp1-201ENSMUST00000027667 Kmt2dQ6PDK2 5588 aa3.27□□□□□ -1.89
Pkp1-201ENSMUST00000027667 Krtap4-16Q91W93 202 aa3.27□□□□□ -1.89
Pkp1-201ENSMUST00000027667 Eppk1Q8R0W0 6548 aa3.27□□□□□ -1.89
Pkp1-201ENSMUST00000027667 Muc19Q6PZE0 7524 aa3.25□□□□□ -1.89
Pkp1-201ENSMUST00000027667 Krtap31-2Q8CAY5 177 aa3.15□□□□□ -1.9
Pkp1-201ENSMUST00000027667 Sprr2bO70554 98 aa2.98□□□□□ -1.93
Pkp1-201ENSMUST00000027667 Gm11568A2A4M2 211 aa2.96□□□□□ -1.94
Pkp1-201ENSMUST00000027667 Krtap9-1Q64526 186 aa2.96□□□□□ -1.94
Pkp1-201ENSMUST00000027667 Gm11559Q9D3H7 191 aa2.94□□□□□ -1.94
Pkp1-201ENSMUST00000027667 Gpr98Q8VHN7 6298 aaKnown RBP2.94□□□□□ -1.94
Pkp1-201ENSMUST00000027667 Gm11639A0A1D5RLM8 5808 aa2.92□□□□□ -1.94
Pkp1-201ENSMUST00000027667 1110025L11RikO09048 78 aa2.78□□□□□ -1.96
Pkp1-201ENSMUST00000027667 Krtap6-5Q925H3 78 aa2.78□□□□□ -1.96
Pkp1-201ENSMUST00000027667 Hmcn1D3YXG0 5634 aa2.78□□□□□ -1.96
Pkp1-201ENSMUST00000027667 Krtap5-2Q9D5Z7 189 aa2.76□□□□□ -1.97
Pkp1-201ENSMUST00000027667 Gm4553A0A1B0GSA9 284 aa2.61□□□□□ -1.99
Pkp1-201ENSMUST00000027667 Gm10229O08631 77 aa2.59□□□□□ -2
Pkp1-201ENSMUST00000027667 Gm2431E9Q8S1 172 aa2.48□□□□□ -2.01
Pkp1-201ENSMUST00000027667 AhnakE9Q616 5656 aaKnown RBP2.42□□□□□ -2.02
Pkp1-201ENSMUST00000027667 A030005L19RikA0A1Y7VIU2 113 aa2.42□□□□□ -2.02
Pkp1-201ENSMUST00000027667 Gm10153A0A1B0GRL1 320 aa2.41□□□□□ -2.02
Pkp1-201ENSMUST00000027667 A0A1Y7VJH8 109 aa2.35□□□□□ -2.03
Pkp1-201ENSMUST00000027667 Gm45337A0A1B0GS71 263 aa2.33□□□□□ -2.04
Pkp1-201ENSMUST00000027667 Gm40460A0A1B0GR10 244 aa2.28□□□□□ -2.04
Pkp1-201ENSMUST00000027667 Gm7579A0A1B0GRJ4 243 aa2.28□□□□□ -2.04
Pkp1-201ENSMUST00000027667 Krtap5-5Q2TA51 241 aa2.28□□□□□ -2.04
Pkp1-201ENSMUST00000027667 Krtap5-4Q62220 223 aa2.28□□□□□ -2.04
Pkp1-201ENSMUST00000027667 Phgr1Q8K0G7 91 aa2.27□□□□□ -2.05
Pkp1-201ENSMUST00000027667 Krtap6-2O08884 159 aa2.15□□□□□ -2.06
Pkp1-201ENSMUST00000027667 Gm39115A0A1B0GSH7 232 aa2.14□□□□□ -2.07
Pkp1-201ENSMUST00000027667 Krtap21-1Q925H4 128 aa2.04□□□□□ -2.08
Pkp1-201ENSMUST00000027667 A0A1Y7VLE6 161 aa1.97□□□□□ -2.09
Pkp1-201ENSMUST00000027667 Gm11567Q9D141 195 aa1.91□□□□□ -2.1
Pkp1-201ENSMUST00000027667 Gm45618A0A1B0GSA0 219 aa1.86□□□□□ -2.11
Pkp1-201ENSMUST00000027667 A030003K21RikA0A1Y7VIM3 128 aa1.79□□□□□ -2.12
Pkp1-201ENSMUST00000027667 Gm7544A0A1Y7VJ58 118 aa1.79□□□□□ -2.12
Pkp1-201ENSMUST00000027667 Krtap28-10A0A1Y7VP58 119 aa1.78□□□□□ -2.12
Pkp1-201ENSMUST00000027667 A030005K14RikA0A1Y7VNY1 122 aa1.71□□□□□ -2.14
Pkp1-201ENSMUST00000027667 Gm6217A0A1Y7VJK9 128 aa1.7□□□□□ -2.14
Pkp1-201ENSMUST00000027667 Gm29735A0A1B0GT06 219 aa1.7□□□□□ -2.14
Pkp1-201ENSMUST00000027667 A0A286YCP9 139 aa1.66□□□□□ -2.14
Pkp1-201ENSMUST00000027667 Krtap28-13A0A087WQP5 138 aa1.63□□□□□ -2.15
Pkp1-201ENSMUST00000027667 A0A1Y7VJ07 166 aa1.47□□□□□ -2.17
Pkp1-201ENSMUST00000027667 Krtap5-1Q64507 230 aa1.33□□□□□ -2.2
Pkp1-201ENSMUST00000027667 A030014E15RikA0A1Y7VJV2 120 aa1.28□□□□□ -2.21
Pkp1-201ENSMUST00000027667 Gm4559A4IF42 199 aa0.9□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 80.1 ms