RNA–Protein interactions for RNA: ENSMUST00000023359.12

Nde1-201, Transcript of Nuclear distribution protein nudE homolog 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nde1, Length 2,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1-201ENSMUST00000023359 Gm10272F7CZ33 110 aa5.26□□□□□ -1.57
Nde1-201ENSMUST00000023359 Syne2Q6ZWQ0 6874 aaKnown RBP5.13□□□□□ -1.59
Nde1-201ENSMUST00000023359 Gm11596B1AQB0 205 aa5.11□□□□□ -1.59
Nde1-201ENSMUST00000023359 Gm9112A2AI92 75 aa5.04□□□□□ -1.6
Nde1-201ENSMUST00000023359 Gm11564A2A4L9 201 aa5.03□□□□□ -1.6
Nde1-201ENSMUST00000023359 Gm11595B1AQA7 289 aa5.03□□□□□ -1.6
Nde1-201ENSMUST00000023359 Krtap4-8B1AQA8 209 aa5.03□□□□□ -1.6
Nde1-201ENSMUST00000023359 Sprr2gO70558 76 aa5.02□□□□□ -1.61
Nde1-201ENSMUST00000023359 Fsip2A2ARZ3 6995 aa4.99□□□□□ -1.61
Nde1-201ENSMUST00000023359 Mt4P47945 62 aa4.99□□□□□ -1.61
Nde1-201ENSMUST00000023359 Gm11562A0PK51 136 aa4.95□□□□□ -1.62
Nde1-201ENSMUST00000023359 Gm11938Q9D3H4 131 aa4.95□□□□□ -1.62
Nde1-201ENSMUST00000023359 Sprr2dO70555 85 aa4.95□□□□□ -1.62
Nde1-201ENSMUST00000023359 Syne1Q6ZWR6 8799 aa4.94□□□□□ -1.62
Nde1-201ENSMUST00000023359 Krtap4-9B1AQA9 244 aa4.93□□□□□ -1.62
Nde1-201ENSMUST00000023359 Lce1kJ3QP15 125 aa4.92□□□□□ -1.62
Nde1-201ENSMUST00000023359 A0A286YCP9 139 aa4.85□□□□□ -1.63
Nde1-201ENSMUST00000023359 Lce3bQ9CQM7 98 aa4.84□□□□□ -1.63
Nde1-201ENSMUST00000023359 Lce1cQ9D1C5 147 aa4.84□□□□□ -1.63
Nde1-201ENSMUST00000023359 4933428G20RikQ9D3X4 101 aa4.83□□□□□ -1.64
Nde1-201ENSMUST00000023359 Krtap4-13Q9D7P3 165 aa4.76□□□□□ -1.65
Nde1-201ENSMUST00000023359 2300003K06RikA2A4M0 262 aa4.73□□□□□ -1.65
Nde1-201ENSMUST00000023359 Krtap19-4Q925H7 84 aa4.72□□□□□ -1.65
Nde1-201ENSMUST00000023359 Sprr2kO70562 68 aa4.7□□□□□ -1.66
Nde1-201ENSMUST00000023359 Lce1fB9EJP6 147 aa4.64□□□□□ -1.67
Nde1-201ENSMUST00000023359 Gm10142J3KMP7 120 aa4.62□□□□□ -1.67
Nde1-201ENSMUST00000023359 Lce3cQ91V05 98 aa4.6□□□□□ -1.67
Nde1-201ENSMUST00000023359 Lce3eF8VQJ0 98 aa4.55□□□□□ -1.68
Nde1-201ENSMUST00000023359 Lce3fQ6PAI4 98 aa4.55□□□□□ -1.68
Nde1-201ENSMUST00000023359 Lce3dE9Q8V1 98 aa4.5□□□□□ -1.69
Nde1-201ENSMUST00000023359 Sprr2iO70560 76 aa4.49□□□□□ -1.69
Nde1-201ENSMUST00000023359 ObscnA2AAJ9 8891 aaKnown RBP4.45□□□□□ -1.7
Nde1-201ENSMUST00000023359 Mt1P02802 61 aaKnown RBP4.41□□□□□ -1.7
Nde1-201ENSMUST00000023359 Krtap20-2E9Q0A8 60 aa4.35□□□□□ -1.71
Nde1-201ENSMUST00000023359 Krtap6-3A0A087WQL6 57 aa4.34□□□□□ -1.71
Nde1-201ENSMUST00000023359 Lce3aQ497I5 98 aa4.34□□□□□ -1.71
Nde1-201ENSMUST00000023359 Sprr2hO70559 108 aa4.33□□□□□ -1.72
Nde1-201ENSMUST00000023359 Gm11568A2A4M2 211 aa4.33□□□□□ -1.72
Nde1-201ENSMUST00000023359 Krtap9-1Q64526 186 aa4.33□□□□□ -1.72
Nde1-201ENSMUST00000023359 A030003K21RikA0A1Y7VIM3 128 aa4.32□□□□□ -1.72
Nde1-201ENSMUST00000023359 Gm11567Q9D141 195 aa4.28□□□□□ -1.72
Nde1-201ENSMUST00000023359 Mt3P28184 68 aa4.27□□□□□ -1.73
Nde1-201ENSMUST00000023359 Krtap5-2Q9D5Z7 189 aa4.24□□□□□ -1.73
Nde1-201ENSMUST00000023359 Gm2431E9Q8S1 172 aa4.22□□□□□ -1.73
Nde1-201ENSMUST00000023359 Gm6217A0A1Y7VJK9 128 aa4.19□□□□□ -1.74
Nde1-201ENSMUST00000023359 Sprr2eO70556 76 aa4.11□□□□□ -1.75
Nde1-201ENSMUST00000023359 Macf1Q9QXZ0 7354 aaKnown RBP4.1□□□□□ -1.75
Nde1-201ENSMUST00000023359 Gm11554B1AQB2 190 aa4.05□□□□□ -1.76
Nde1-201ENSMUST00000023359 Gm10153A0A1B0GRL1 320 aa4.05□□□□□ -1.76
Nde1-201ENSMUST00000023359 Gm39115A0A1B0GSH7 232 aa3.93□□□□□ -1.78
Nde1-201ENSMUST00000023359 Gm4553A0A1B0GSA9 284 aa3.91□□□□□ -1.78
Nde1-201ENSMUST00000023359 Hmcn1D3YXG0 5634 aa3.88□□□□□ -1.79
Nde1-201ENSMUST00000023359 Sprr2fO70557 76 aa3.88□□□□□ -1.79
Nde1-201ENSMUST00000023359 Gm45337A0A1B0GS71 263 aa3.86□□□□□ -1.79
Nde1-201ENSMUST00000023359 Gm29735A0A1B0GT06 219 aa3.85□□□□□ -1.79
Nde1-201ENSMUST00000023359 Kmt2dQ6PDK2 5588 aa3.79□□□□□ -1.8
Nde1-201ENSMUST00000023359 Gm10024A0A0A0MQA4 119 aa3.77□□□□□ -1.81
Nde1-201ENSMUST00000023359 Gm45618A0A1B0GSA0 219 aa3.76□□□□□ -1.81
Nde1-201ENSMUST00000023359 Gm40460A0A1B0GR10 244 aa3.73□□□□□ -1.81
Nde1-201ENSMUST00000023359 Gm7579A0A1B0GRJ4 243 aa3.73□□□□□ -1.81
Nde1-201ENSMUST00000023359 Krtap5-5Q2TA51 241 aa3.73□□□□□ -1.81
Nde1-201ENSMUST00000023359 Krtap5-4Q62220 223 aa3.73□□□□□ -1.81
Nde1-201ENSMUST00000023359 Krtap4-16Q91W93 202 aa3.73□□□□□ -1.81
Nde1-201ENSMUST00000023359 Muc16A0A140LJ72 8478 aa3.59□□□□□ -1.84
Nde1-201ENSMUST00000023359 DstQ91ZU6 7393 aaKnown RBP3.49□□□□□ -1.85
Nde1-201ENSMUST00000023359 Muc19Q6PZE0 7524 aa3.45□□□□□ -1.86
Nde1-201ENSMUST00000023359 Eppk1Q8R0W0 6548 aa3.39□□□□□ -1.87
Nde1-201ENSMUST00000023359 Gm11639A0A1D5RLM8 5808 aa3.35□□□□□ -1.87
Nde1-201ENSMUST00000023359 1110025L11RikO09048 78 aa3.33□□□□□ -1.88
Nde1-201ENSMUST00000023359 Krtap6-5Q925H3 78 aa3.33□□□□□ -1.88
Nde1-201ENSMUST00000023359 AhnakE9Q616 5656 aaKnown RBP3.18□□□□□ -1.9
Nde1-201ENSMUST00000023359 NebE9Q1W3 7152 aa3.13□□□□□ -1.91
Nde1-201ENSMUST00000023359 Gpr98Q8VHN7 6298 aaKnown RBP3.03□□□□□ -1.93
Nde1-201ENSMUST00000023359 Gm10229O08631 77 aa2.96□□□□□ -1.94
Nde1-201ENSMUST00000023359 Sprr2bO70554 98 aa2.91□□□□□ -1.94
Nde1-201ENSMUST00000023359 Gm4559A4IF42 199 aa2.84□□□□□ -1.95
Nde1-201ENSMUST00000023359 Krtap5-1Q64507 230 aa2.76□□□□□ -1.97
Nde1-201ENSMUST00000023359 Krtap21-1Q925H4 128 aa2.72□□□□□ -1.97
Nde1-201ENSMUST00000023359 Phgr1Q8K0G7 91 aa2.57□□□□□ -2
Nde1-201ENSMUST00000023359 Krtap6-2O08884 159 aa2.52□□□□□ -2.01
Retrieved 80 of 22,080 RNA–protein pairs in 8.8 ms