RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Lce1eQ9D139 143 aa3.09□□□□□ -1.91
Cldn1-201ENSMUST00000023154 Gm11564A2A4L9 201 aa3.09□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Gm11595B1AQA7 289 aa3.09□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Krtap4-8B1AQA8 209 aa3.09□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Lce1lQ9D1G7 135 aa3.09□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Fsip2A2ARZ3 6995 aa3.08□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Syne1Q6ZWR6 8799 aa3.07□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Sprr2gO70558 76 aa3.06□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Mt4P47945 62 aa3.05□□□□□ -1.92
Cldn1-201ENSMUST00000023154 Gm11562A0PK51 136 aa3.02□□□□□ -1.93
Cldn1-201ENSMUST00000023154 Gm11938Q9D3H4 131 aa3.02□□□□□ -1.93
Cldn1-201ENSMUST00000023154 Krtap4-9B1AQA9 244 aa3.02□□□□□ -1.93
Cldn1-201ENSMUST00000023154 Sprr2dO70555 85 aa3.02□□□□□ -1.93
Cldn1-201ENSMUST00000023154 Lce1cQ9D1C5 147 aa3□□□□□ -1.93
Cldn1-201ENSMUST00000023154 4933428G20RikQ9D3X4 101 aa3□□□□□ -1.93
Cldn1-201ENSMUST00000023154 Lce1bQ9D149 137 aa2.97□□□□□ -1.93
Cldn1-201ENSMUST00000023154 Krtap31-2Q8CAY5 177 aa2.94□□□□□ -1.94
Cldn1-201ENSMUST00000023154 Lce3bQ9CQM7 98 aa2.93□□□□□ -1.94
Cldn1-201ENSMUST00000023154 Krtap4-13Q9D7P3 165 aa2.93□□□□□ -1.94
Cldn1-201ENSMUST00000023154 Krtap31-1Q9D644 177 aa2.92□□□□□ -1.94
Cldn1-201ENSMUST00000023154 2300003K06RikA2A4M0 262 aa2.89□□□□□ -1.95
Cldn1-201ENSMUST00000023154 Lce1fB9EJP6 147 aa2.88□□□□□ -1.95
Cldn1-201ENSMUST00000023154 Gm10100J3QK64 120 aa2.87□□□□□ -1.95
Cldn1-201ENSMUST00000023154 Krtap19-4Q925H7 84 aa2.86□□□□□ -1.95
Cldn1-201ENSMUST00000023154 Sprr2kO70562 68 aa2.82□□□□□ -1.96
Cldn1-201ENSMUST00000023154 Gm10142J3KMP7 120 aa2.8□□□□□ -1.96
Cldn1-201ENSMUST00000023154 Lce3cQ91V05 98 aa2.78□□□□□ -1.96
Cldn1-201ENSMUST00000023154 Lce1kJ3QP15 125 aa2.76□□□□□ -1.97
Cldn1-201ENSMUST00000023154 Lce3eF8VQJ0 98 aa2.75□□□□□ -1.97
Cldn1-201ENSMUST00000023154 Lce3fQ6PAI4 98 aa2.75□□□□□ -1.97
Cldn1-201ENSMUST00000023154 ObscnA2AAJ9 8891 aaKnown RBP2.75□□□□□ -1.97
Cldn1-201ENSMUST00000023154 Gm45618A0A1B0GSA0 219 aa2.73□□□□□ -1.97
Cldn1-201ENSMUST00000023154 Lce3dE9Q8V1 98 aa2.72□□□□□ -1.97
Cldn1-201ENSMUST00000023154 Sprr2iO70560 76 aa2.71□□□□□ -1.98
Cldn1-201ENSMUST00000023154 Hmcn1D3YXG0 5634 aa2.7□□□□□ -1.98
Cldn1-201ENSMUST00000023154 Mt1P02802 61 aaKnown RBP2.7□□□□□ -1.98
Cldn1-201ENSMUST00000023154 Gm11568A2A4M2 211 aa2.68□□□□□ -1.98
Cldn1-201ENSMUST00000023154 Krtap9-1Q64526 186 aa2.68□□□□□ -1.98
Cldn1-201ENSMUST00000023154 Krtap20-2E9Q0A8 60 aa2.67□□□□□ -1.98
Cldn1-201ENSMUST00000023154 Sprr2hO70559 108 aa2.65□□□□□ -1.99
Cldn1-201ENSMUST00000023154 Krtap6-3A0A087WQL6 57 aa2.64□□□□□ -1.99
Cldn1-201ENSMUST00000023154 Gm39115A0A1B0GSH7 232 aa2.63□□□□□ -1.99
Cldn1-201ENSMUST00000023154 Lce3aQ497I5 98 aa2.63□□□□□ -1.99
Cldn1-201ENSMUST00000023154 Krtap5-2Q9D5Z7 189 aa2.61□□□□□ -1.99
Cldn1-201ENSMUST00000023154 Gm11554B1AQB2 190 aa2.59□□□□□ -1.99
Cldn1-201ENSMUST00000023154 Gm2431E9Q8S1 172 aa2.54□□□□□ -2
Cldn1-201ENSMUST00000023154 Macf1Q9QXZ0 7354 aaKnown RBP2.54□□□□□ -2
Cldn1-201ENSMUST00000023154 Gm11567Q9D141 195 aa2.52□□□□□ -2.01
Cldn1-201ENSMUST00000023154 Gm29735A0A1B0GT06 219 aa2.51□□□□□ -2.01
Cldn1-201ENSMUST00000023154 Gm10153A0A1B0GRL1 320 aa2.5□□□□□ -2.01
Cldn1-201ENSMUST00000023154 Sprr2eO70556 76 aa2.5□□□□□ -2.01
Cldn1-201ENSMUST00000023154 Muc16A0A140LJ72 8478 aa2.46□□□□□ -2.02
Cldn1-201ENSMUST00000023154 Sprr2fO70557 76 aa2.44□□□□□ -2.02
Cldn1-201ENSMUST00000023154 Krtap4-16Q91W93 202 aa2.43□□□□□ -2.02
Cldn1-201ENSMUST00000023154 Kmt2dQ6PDK2 5588 aa2.42□□□□□ -2.02
Cldn1-201ENSMUST00000023154 Gm11559Q9D3H7 191 aa2.41□□□□□ -2.02
Cldn1-201ENSMUST00000023154 Gm4553A0A1B0GSA9 284 aa2.4□□□□□ -2.03
Cldn1-201ENSMUST00000023154 Gm45337A0A1B0GS71 263 aa2.38□□□□□ -2.03
Cldn1-201ENSMUST00000023154 Mt3P28184 68 aa2.37□□□□□ -2.03
Cldn1-201ENSMUST00000023154 Gm10024A0A0A0MQA4 119 aa2.31□□□□□ -2.04
Cldn1-201ENSMUST00000023154 Gm40460A0A1B0GR10 244 aa2.3□□□□□ -2.04
Cldn1-201ENSMUST00000023154 Gm7579A0A1B0GRJ4 243 aa2.3□□□□□ -2.04
Cldn1-201ENSMUST00000023154 Krtap5-5Q2TA51 241 aa2.3□□□□□ -2.04
Cldn1-201ENSMUST00000023154 Krtap5-4Q62220 223 aa2.3□□□□□ -2.04
Cldn1-201ENSMUST00000023154 Muc19Q6PZE0 7524 aa2.15□□□□□ -2.07
Cldn1-201ENSMUST00000023154 DstQ91ZU6 7393 aaKnown RBP2.15□□□□□ -2.07
Cldn1-201ENSMUST00000023154 Gm11639A0A1D5RLM8 5808 aa2.12□□□□□ -2.07
Cldn1-201ENSMUST00000023154 Eppk1Q8R0W0 6548 aa2.11□□□□□ -2.07
Cldn1-201ENSMUST00000023154 1110025L11RikO09048 78 aa2.03□□□□□ -2.08
Cldn1-201ENSMUST00000023154 Krtap6-5Q925H3 78 aa2.03□□□□□ -2.08
Cldn1-201ENSMUST00000023154 AhnakE9Q616 5656 aaKnown RBP2.01□□□□□ -2.09
Cldn1-201ENSMUST00000023154 Krtap5-1Q64507 230 aa1.99□□□□□ -2.09
Cldn1-201ENSMUST00000023154 NebE9Q1W3 7152 aa1.92□□□□□ -2.1
Cldn1-201ENSMUST00000023154 Gm4559A4IF42 199 aa1.83□□□□□ -2.12
Cldn1-201ENSMUST00000023154 Gpr98Q8VHN7 6298 aaKnown RBP1.81□□□□□ -2.12
Cldn1-201ENSMUST00000023154 Gm10229O08631 77 aa1.79□□□□□ -2.12
Cldn1-201ENSMUST00000023154 Sprr2bO70554 98 aa1.73□□□□□ -2.13
Cldn1-201ENSMUST00000023154 Krtap21-1Q925H4 128 aa1.67□□□□□ -2.14
Cldn1-201ENSMUST00000023154 Phgr1Q8K0G7 91 aa1.57□□□□□ -2.16
Cldn1-201ENSMUST00000023154 Krtap6-2O08884 159 aa1.53□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 31.5 ms