RNA–Protein interactions for RNA: ENSMUST00000022744.3

Gdnf-201, Transcript of Glial cell line-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gdnf, Length 3,509 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gdnf-201ENSMUST00000022744 Gm10272F7CZ33 110 aa3.38□□□□□ -1.87
Gdnf-201ENSMUST00000022744 Sprr2kO70562 68 aa3.37□□□□□ -1.87
Gdnf-201ENSMUST00000022744 Macf1Q9QXZ0 7354 aaKnown RBP3.35□□□□□ -1.87
Gdnf-201ENSMUST00000022744 Gm40193A0A1B0GT39 78 aa3.32□□□□□ -1.88
Gdnf-201ENSMUST00000022744 2300003K06RikA2A4M0 262 aa3.3□□□□□ -1.88
Gdnf-201ENSMUST00000022744 A0A286YCP9 139 aa3.28□□□□□ -1.88
Gdnf-201ENSMUST00000022744 Lce1lQ9D1G7 135 aa3.24□□□□□ -1.89
Gdnf-201ENSMUST00000022744 Krtap31-1Q9D644 177 aa3.22□□□□□ -1.89
Gdnf-201ENSMUST00000022744 Gm11562A0PK51 136 aa3.2□□□□□ -1.9
Gdnf-201ENSMUST00000022744 Lce1dQ9D731 133 aa3.15□□□□□ -1.9
Gdnf-201ENSMUST00000022744 Lce3bQ9CQM7 98 aa3.14□□□□□ -1.91
Gdnf-201ENSMUST00000022744 Muc16A0A140LJ72 8478 aa3.11□□□□□ -1.91
Gdnf-201ENSMUST00000022744 Lce1bQ9D149 137 aa3.1□□□□□ -1.91
Gdnf-201ENSMUST00000022744 Krtap31-2Q8CAY5 177 aa3.07□□□□□ -1.92
Gdnf-201ENSMUST00000022744 Lce1kJ3QP15 125 aa3.05□□□□□ -1.92
Gdnf-201ENSMUST00000022744 Lce1cQ9D1C5 147 aa3.05□□□□□ -1.92
Gdnf-201ENSMUST00000022744 Sprr2gO70558 76 aa3.05□□□□□ -1.92
Gdnf-201ENSMUST00000022744 2310046K23RikA0A0A6YVW6 87 aa3.03□□□□□ -1.92
Gdnf-201ENSMUST00000022744 Lce1eQ9D139 143 aa3.01□□□□□ -1.93
Gdnf-201ENSMUST00000022744 Krtap20-2E9Q0A8 60 aa3□□□□□ -1.93
Gdnf-201ENSMUST00000022744 A0A1Y7VJ07 166 aa3□□□□□ -1.93
Gdnf-201ENSMUST00000022744 Lce3cQ91V05 98 aa2.96□□□□□ -1.94
Gdnf-201ENSMUST00000022744 Lce1fB9EJP6 147 aa2.96□□□□□ -1.94
Gdnf-201ENSMUST00000022744 Lce1a1Q9CQH5 143 aa2.95□□□□□ -1.94
Gdnf-201ENSMUST00000022744 Sprr2iO70560 76 aa2.95□□□□□ -1.94
Gdnf-201ENSMUST00000022744 Kmt2dQ6PDK2 5588 aa2.94□□□□□ -1.94
Gdnf-201ENSMUST00000022744 Muc19Q6PZE0 7524 aa2.93□□□□□ -1.94
Gdnf-201ENSMUST00000022744 ObscnA2AAJ9 8891 aaKnown RBP2.93□□□□□ -1.94
Gdnf-201ENSMUST00000022744 Krtap6-3A0A087WQL6 57 aa2.92□□□□□ -1.94
Gdnf-201ENSMUST00000022744 Lce3eF8VQJ0 98 aa2.88□□□□□ -1.95
Gdnf-201ENSMUST00000022744 Lce3fQ6PAI4 98 aa2.88□□□□□ -1.95
Gdnf-201ENSMUST00000022744 DstQ91ZU6 7393 aaKnown RBP2.88□□□□□ -1.95
Gdnf-201ENSMUST00000022744 Gm11554B1AQB2 190 aa2.86□□□□□ -1.95
Gdnf-201ENSMUST00000022744 Gm10100J3QK64 120 aa2.84□□□□□ -1.96
Gdnf-201ENSMUST00000022744 Gm11938Q9D3H4 131 aa2.83□□□□□ -1.96
Gdnf-201ENSMUST00000022744 4933428G20RikQ9D3X4 101 aa2.81□□□□□ -1.96
Gdnf-201ENSMUST00000022744 Lce3dE9Q8V1 98 aa2.81□□□□□ -1.96
Gdnf-201ENSMUST00000022744 Hmcn1D3YXG0 5634 aa2.8□□□□□ -1.96
Gdnf-201ENSMUST00000022744 Gm11568A2A4M2 211 aa2.8□□□□□ -1.96
Gdnf-201ENSMUST00000022744 Krtap9-1Q64526 186 aa2.8□□□□□ -1.96
Gdnf-201ENSMUST00000022744 A030014E15RikA0A1Y7VJV2 120 aa2.77□□□□□ -1.97
Gdnf-201ENSMUST00000022744 NebE9Q1W3 7152 aa2.77□□□□□ -1.97
Gdnf-201ENSMUST00000022744 Lce3aQ497I5 98 aa2.73□□□□□ -1.97
Gdnf-201ENSMUST00000022744 Mt1P02802 61 aaKnown RBP2.72□□□□□ -1.97
Gdnf-201ENSMUST00000022744 Sprr2dO70555 85 aa2.71□□□□□ -1.98
Gdnf-201ENSMUST00000022744 Gm10142J3KMP7 120 aa2.7□□□□□ -1.98
Gdnf-201ENSMUST00000022744 Krtap19-4Q925H7 84 aa2.65□□□□□ -1.99
Gdnf-201ENSMUST00000022744 Krtap5-2Q9D5Z7 189 aa2.61□□□□□ -1.99
Gdnf-201ENSMUST00000022744 Gm11559Q9D3H7 191 aa2.58□□□□□ -2
Gdnf-201ENSMUST00000022744 Eppk1Q8R0W0 6548 aa2.56□□□□□ -2
Gdnf-201ENSMUST00000022744 Gm11639A0A1D5RLM8 5808 aa2.55□□□□□ -2
Gdnf-201ENSMUST00000022744 Sprr2hO70559 108 aa2.47□□□□□ -2.01
Gdnf-201ENSMUST00000022744 Gm2431E9Q8S1 172 aa2.46□□□□□ -2.02
Gdnf-201ENSMUST00000022744 Gm10153A0A1B0GRL1 320 aa2.45□□□□□ -2.02
Gdnf-201ENSMUST00000022744 Mt3P28184 68 aa2.43□□□□□ -2.02
Gdnf-201ENSMUST00000022744 Gm4553A0A1B0GSA9 284 aa2.42□□□□□ -2.02
Gdnf-201ENSMUST00000022744 Sprr2eO70556 76 aa2.41□□□□□ -2.02
Gdnf-201ENSMUST00000022744 Krtap4-16Q91W93 202 aa2.36□□□□□ -2.03
Gdnf-201ENSMUST00000022744 Gpr98Q8VHN7 6298 aaKnown RBP2.31□□□□□ -2.04
Gdnf-201ENSMUST00000022744 Gm10024A0A0A0MQA4 119 aa2.31□□□□□ -2.04
Gdnf-201ENSMUST00000022744 Gm45337A0A1B0GS71 263 aa2.31□□□□□ -2.04
Gdnf-201ENSMUST00000022744 Sprr2fO70557 76 aa2.3□□□□□ -2.04
Gdnf-201ENSMUST00000022744 Gm40460A0A1B0GR10 244 aa2.19□□□□□ -2.06
Gdnf-201ENSMUST00000022744 Gm7579A0A1B0GRJ4 243 aa2.19□□□□□ -2.06
Gdnf-201ENSMUST00000022744 Krtap5-5Q2TA51 241 aa2.19□□□□□ -2.06
Gdnf-201ENSMUST00000022744 Krtap5-4Q62220 223 aa2.19□□□□□ -2.06
Gdnf-201ENSMUST00000022744 AhnakE9Q616 5656 aaKnown RBP2.17□□□□□ -2.06
Gdnf-201ENSMUST00000022744 Gm39115A0A1B0GSH7 232 aa2.1□□□□□ -2.07
Gdnf-201ENSMUST00000022744 Gm45618A0A1B0GSA0 219 aa2.07□□□□□ -2.08
Gdnf-201ENSMUST00000022744 1110025L11RikO09048 78 aa2□□□□□ -2.09
Gdnf-201ENSMUST00000022744 Krtap6-5Q925H3 78 aa2□□□□□ -2.09
Gdnf-201ENSMUST00000022744 Gm11567Q9D141 195 aa1.85□□□□□ -2.11
Gdnf-201ENSMUST00000022744 Gm10229O08631 77 aa1.8□□□□□ -2.12
Gdnf-201ENSMUST00000022744 Gm29735A0A1B0GT06 219 aa1.72□□□□□ -2.13
Gdnf-201ENSMUST00000022744 Sprr2bO70554 98 aa1.69□□□□□ -2.14
Gdnf-201ENSMUST00000022744 Krtap21-1Q925H4 128 aa1.61□□□□□ -2.15
Gdnf-201ENSMUST00000022744 Krtap6-2O08884 159 aa1.57□□□□□ -2.16
Gdnf-201ENSMUST00000022744 Krtap5-1Q64507 230 aa1.55□□□□□ -2.16
Gdnf-201ENSMUST00000022744 Phgr1Q8K0G7 91 aa1.49□□□□□ -2.17
Gdnf-201ENSMUST00000022744 Gm4559A4IF42 199 aa1.43□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 39.8 ms