RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gm10142J3KMP7 120 aa3.6□□□□□ -1.83
Msh3-201ENSMUST00000022220 Gm11564A2A4L9 201 aa3.59□□□□□ -1.83
Msh3-201ENSMUST00000022220 Gm11563B1AQ90 168 aa3.59□□□□□ -1.83
Msh3-201ENSMUST00000022220 Gm11595B1AQA7 289 aa3.59□□□□□ -1.83
Msh3-201ENSMUST00000022220 Krtap4-8B1AQA8 209 aa3.59□□□□□ -1.83
Msh3-201ENSMUST00000022220 Lce1bQ9D149 137 aa3.56□□□□□ -1.84
Msh3-201ENSMUST00000022220 Sprr2dO70555 85 aa3.53□□□□□ -1.84
Msh3-201ENSMUST00000022220 Lce1fB9EJP6 147 aa3.52□□□□□ -1.85
Msh3-201ENSMUST00000022220 Lce1cQ9D1C5 147 aa3.52□□□□□ -1.85
Msh3-201ENSMUST00000022220 Lce1lQ9D1G7 135 aa3.52□□□□□ -1.85
Msh3-201ENSMUST00000022220 Sprr2iO70560 76 aa3.51□□□□□ -1.85
Msh3-201ENSMUST00000022220 Krtap4-13Q9D7P3 165 aa3.51□□□□□ -1.85
Msh3-201ENSMUST00000022220 Lce3dE9Q8V1 98 aa3.51□□□□□ -1.85
Msh3-201ENSMUST00000022220 Krtap4-7Q9D732 168 aa3.51□□□□□ -1.85
Msh3-201ENSMUST00000022220 2300003K06RikA2A4M0 262 aa3.48□□□□□ -1.85
Msh3-201ENSMUST00000022220 Lce3aQ497I5 98 aa3.46□□□□□ -1.86
Msh3-201ENSMUST00000022220 Gm11555B1AQ89 175 aa3.41□□□□□ -1.86
Msh3-201ENSMUST00000022220 Krtap19-4Q925H7 84 aa3.38□□□□□ -1.87
Msh3-201ENSMUST00000022220 Lce1a1Q9CQH5 143 aa3.34□□□□□ -1.87
Msh3-201ENSMUST00000022220 Krtap31-1Q9D644 177 aa3.33□□□□□ -1.88
Msh3-201ENSMUST00000022220 Lce1kJ3QP15 125 aa3.32□□□□□ -1.88
Msh3-201ENSMUST00000022220 ObscnA2AAJ9 8891 aaKnown RBP3.31□□□□□ -1.88
Msh3-201ENSMUST00000022220 Gm11562A0PK51 136 aa3.29□□□□□ -1.88
Msh3-201ENSMUST00000022220 Sprr2fO70557 76 aa3.27□□□□□ -1.89
Msh3-201ENSMUST00000022220 Krtap4-16Q91W93 202 aa3.22□□□□□ -1.89
Msh3-201ENSMUST00000022220 Sprr2hO70559 108 aa3.19□□□□□ -1.9
Msh3-201ENSMUST00000022220 Muc19Q6PZE0 7524 aa3.16□□□□□ -1.9
Msh3-201ENSMUST00000022220 Sprr2eO70556 76 aa3.16□□□□□ -1.9
Msh3-201ENSMUST00000022220 Gm10024A0A0A0MQA4 119 aa3.11□□□□□ -1.91
Msh3-201ENSMUST00000022220 Krtap31-2Q8CAY5 177 aa3.1□□□□□ -1.91
Msh3-201ENSMUST00000022220 Krtap20-2E9Q0A8 60 aa3.1□□□□□ -1.91
Msh3-201ENSMUST00000022220 DstQ91ZU6 7393 aaKnown RBP3.07□□□□□ -1.92
Msh3-201ENSMUST00000022220 A0A1Y7VJH8 109 aa3.05□□□□□ -1.92
Msh3-201ENSMUST00000022220 Gm11554B1AQB2 190 aa3.04□□□□□ -1.92
Msh3-201ENSMUST00000022220 NebE9Q1W3 7152 aa3.03□□□□□ -1.92
Msh3-201ENSMUST00000022220 Krtap28-10A0A1Y7VP58 119 aa3.01□□□□□ -1.93
Msh3-201ENSMUST00000022220 Krtap6-3A0A087WQL6 57 aa3.01□□□□□ -1.93
Msh3-201ENSMUST00000022220 A0A1Y7VLE6 161 aa2.95□□□□□ -1.94
Msh3-201ENSMUST00000022220 Mt1P02802 61 aaKnown RBP2.93□□□□□ -1.94
Msh3-201ENSMUST00000022220 Mt3P28184 68 aa2.87□□□□□ -1.95
Msh3-201ENSMUST00000022220 Krtap28-13A0A087WQP5 138 aa2.85□□□□□ -1.95
Msh3-201ENSMUST00000022220 A030005L19RikA0A1Y7VIU2 113 aa2.85□□□□□ -1.95
Msh3-201ENSMUST00000022220 A030005K14RikA0A1Y7VNY1 122 aa2.77□□□□□ -1.97
Msh3-201ENSMUST00000022220 Kmt2dQ6PDK2 5588 aa2.76□□□□□ -1.97
Msh3-201ENSMUST00000022220 Gm7544A0A1Y7VJ58 118 aa2.73□□□□□ -1.97
Msh3-201ENSMUST00000022220 Gm11568A2A4M2 211 aa2.69□□□□□ -1.98
Msh3-201ENSMUST00000022220 Krtap9-1Q64526 186 aa2.69□□□□□ -1.98
Msh3-201ENSMUST00000022220 Hmcn1D3YXG0 5634 aa2.64□□□□□ -1.99
Msh3-201ENSMUST00000022220 A030003K21RikA0A1Y7VIM3 128 aa2.58□□□□□ -2
Msh3-201ENSMUST00000022220 Gm11639A0A1D5RLM8 5808 aa2.56□□□□□ -2
Msh3-201ENSMUST00000022220 A0A1Y7VJ07 166 aa2.54□□□□□ -2
Msh3-201ENSMUST00000022220 Gpr98Q8VHN7 6298 aaKnown RBP2.53□□□□□ -2
Msh3-201ENSMUST00000022220 Gm11559Q9D3H7 191 aa2.52□□□□□ -2.01
Msh3-201ENSMUST00000022220 Krtap5-2Q9D5Z7 189 aa2.48□□□□□ -2.01
Msh3-201ENSMUST00000022220 Eppk1Q8R0W0 6548 aa2.45□□□□□ -2.02
Msh3-201ENSMUST00000022220 Gm6217A0A1Y7VJK9 128 aa2.45□□□□□ -2.02
Msh3-201ENSMUST00000022220 A030014E15RikA0A1Y7VJV2 120 aa2.4□□□□□ -2.03
Msh3-201ENSMUST00000022220 Gm10153A0A1B0GRL1 320 aa2.3□□□□□ -2.04
Msh3-201ENSMUST00000022220 Gm4553A0A1B0GSA9 284 aa2.3□□□□□ -2.04
Msh3-201ENSMUST00000022220 1110025L11RikO09048 78 aa2.3□□□□□ -2.04
Msh3-201ENSMUST00000022220 Krtap6-5Q925H3 78 aa2.3□□□□□ -2.04
Msh3-201ENSMUST00000022220 Sprr2bO70554 98 aa2.29□□□□□ -2.04
Msh3-201ENSMUST00000022220 Gm2431E9Q8S1 172 aa2.24□□□□□ -2.05
Msh3-201ENSMUST00000022220 Gm45337A0A1B0GS71 263 aa2.2□□□□□ -2.06
Msh3-201ENSMUST00000022220 AhnakE9Q616 5656 aaKnown RBP2.14□□□□□ -2.07
Msh3-201ENSMUST00000022220 Gm40460A0A1B0GR10 244 aa2.12□□□□□ -2.07
Msh3-201ENSMUST00000022220 Gm7579A0A1B0GRJ4 243 aa2.12□□□□□ -2.07
Msh3-201ENSMUST00000022220 Krtap5-5Q2TA51 241 aa2.12□□□□□ -2.07
Msh3-201ENSMUST00000022220 Krtap5-4Q62220 223 aa2.12□□□□□ -2.07
Msh3-201ENSMUST00000022220 Gm10229O08631 77 aa2.11□□□□□ -2.07
Msh3-201ENSMUST00000022220 Phgr1Q8K0G7 91 aa2.01□□□□□ -2.09
Msh3-201ENSMUST00000022220 Gm39115A0A1B0GSH7 232 aa1.99□□□□□ -2.09
Msh3-201ENSMUST00000022220 A0A286YCP9 139 aa1.96□□□□□ -2.1
Msh3-201ENSMUST00000022220 Gm11567Q9D141 195 aa1.78□□□□□ -2.12
Msh3-201ENSMUST00000022220 Krtap6-2O08884 159 aa1.78□□□□□ -2.12
Msh3-201ENSMUST00000022220 Krtap21-1Q925H4 128 aa1.75□□□□□ -2.13
Msh3-201ENSMUST00000022220 Gm45618A0A1B0GSA0 219 aa1.72□□□□□ -2.13
Msh3-201ENSMUST00000022220 Gm29735A0A1B0GT06 219 aa1.59□□□□□ -2.16
Msh3-201ENSMUST00000022220 Krtap5-1Q64507 230 aa1.16□□□□□ -2.22
Msh3-201ENSMUST00000022220 Gm4559A4IF42 199 aa1.05□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 75.1 ms