RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Sprr2gO70558 76 aa3.69□□□□□ -1.82
Cfap54-201ENSMUST00000020200 Gm11596B1AQB0 205 aa3.68□□□□□ -1.82
Cfap54-201ENSMUST00000020200 Lce1a1Q9CQH5 143 aa3.68□□□□□ -1.82
Cfap54-201ENSMUST00000020200 4933428G20RikQ9D3X4 101 aa3.67□□□□□ -1.82
Cfap54-201ENSMUST00000020200 Syne1Q6ZWR6 8799 aa3.65□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Syne2Q6ZWQ0 6874 aaKnown RBP3.64□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Gm11564A2A4L9 201 aa3.64□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Gm11595B1AQA7 289 aa3.64□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Krtap4-8B1AQA8 209 aa3.64□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Fsip2A2ARZ3 6995 aa3.63□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Mt4P47945 62 aa3.63□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Gm11938Q9D3H4 131 aa3.61□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Lce1cQ9D1C5 147 aa3.61□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Sprr2dO70555 85 aa3.6□□□□□ -1.83
Cfap54-201ENSMUST00000020200 Krtap4-9B1AQA9 244 aa3.58□□□□□ -1.84
Cfap54-201ENSMUST00000020200 Lce3bQ9CQM7 98 aa3.5□□□□□ -1.85
Cfap54-201ENSMUST00000020200 Gm6217A0A1Y7VJK9 128 aa3.49□□□□□ -1.85
Cfap54-201ENSMUST00000020200 Lce1bQ9D149 137 aa3.49□□□□□ -1.85
Cfap54-201ENSMUST00000020200 Krtap4-13Q9D7P3 165 aa3.46□□□□□ -1.86
Cfap54-201ENSMUST00000020200 Lce1fB9EJP6 147 aa3.46□□□□□ -1.86
Cfap54-201ENSMUST00000020200 2300003K06RikA2A4M0 262 aa3.43□□□□□ -1.86
Cfap54-201ENSMUST00000020200 Lce1lQ9D1G7 135 aa3.43□□□□□ -1.86
Cfap54-201ENSMUST00000020200 Krtap19-4Q925H7 84 aa3.42□□□□□ -1.86
Cfap54-201ENSMUST00000020200 Gm10100J3QK64 120 aa3.39□□□□□ -1.87
Cfap54-201ENSMUST00000020200 Sprr2kO70562 68 aa3.38□□□□□ -1.87
Cfap54-201ENSMUST00000020200 Lce3cQ91V05 98 aa3.34□□□□□ -1.87
Cfap54-201ENSMUST00000020200 Lce3eF8VQJ0 98 aa3.31□□□□□ -1.88
Cfap54-201ENSMUST00000020200 Gm10142J3KMP7 120 aa3.31□□□□□ -1.88
Cfap54-201ENSMUST00000020200 Lce3fQ6PAI4 98 aa3.31□□□□□ -1.88
Cfap54-201ENSMUST00000020200 Lce1kJ3QP15 125 aa3.3□□□□□ -1.88
Cfap54-201ENSMUST00000020200 Krtap6-3A0A087WQL6 57 aa3.29□□□□□ -1.88
Cfap54-201ENSMUST00000020200 ObscnA2AAJ9 8891 aaKnown RBP3.27□□□□□ -1.89
Cfap54-201ENSMUST00000020200 Lce3dE9Q8V1 98 aa3.25□□□□□ -1.89
Cfap54-201ENSMUST00000020200 Sprr2iO70560 76 aa3.22□□□□□ -1.89
Cfap54-201ENSMUST00000020200 Mt1P02802 61 aaKnown RBP3.19□□□□□ -1.9
Cfap54-201ENSMUST00000020200 Sprr2hO70559 108 aa3.18□□□□□ -1.9
Cfap54-201ENSMUST00000020200 Krtap20-2E9Q0A8 60 aa3.17□□□□□ -1.9
Cfap54-201ENSMUST00000020200 Lce3aQ497I5 98 aa3.16□□□□□ -1.9
Cfap54-201ENSMUST00000020200 Gm11568A2A4M2 211 aa3.15□□□□□ -1.91
Cfap54-201ENSMUST00000020200 Krtap9-1Q64526 186 aa3.15□□□□□ -1.91
Cfap54-201ENSMUST00000020200 Sprr2eO70556 76 aa3.11□□□□□ -1.91
Cfap54-201ENSMUST00000020200 Sprr2fO70557 76 aa3.07□□□□□ -1.92
Cfap54-201ENSMUST00000020200 Krtap5-2Q9D5Z7 189 aa3.05□□□□□ -1.92
Cfap54-201ENSMUST00000020200 Macf1Q9QXZ0 7354 aaKnown RBP3.04□□□□□ -1.92
Cfap54-201ENSMUST00000020200 Gm11559Q9D3H7 191 aa2.98□□□□□ -1.93
Cfap54-201ENSMUST00000020200 Gm10153A0A1B0GRL1 320 aa2.92□□□□□ -1.94
Cfap54-201ENSMUST00000020200 Hmcn1D3YXG0 5634 aa2.86□□□□□ -1.95
Cfap54-201ENSMUST00000020200 Krtap4-16Q91W93 202 aa2.86□□□□□ -1.95
Cfap54-201ENSMUST00000020200 Kmt2dQ6PDK2 5588 aa2.85□□□□□ -1.95
Cfap54-201ENSMUST00000020200 Gm11554B1AQB2 190 aa2.82□□□□□ -1.96
Cfap54-201ENSMUST00000020200 Mt3P28184 68 aa2.82□□□□□ -1.96
Cfap54-201ENSMUST00000020200 Eppk1Q8R0W0 6548 aa2.82□□□□□ -1.96
Cfap54-201ENSMUST00000020200 Gm4553A0A1B0GSA9 284 aa2.8□□□□□ -1.96
Cfap54-201ENSMUST00000020200 Muc16A0A140LJ72 8478 aa2.79□□□□□ -1.96
Cfap54-201ENSMUST00000020200 Gm45337A0A1B0GS71 263 aa2.77□□□□□ -1.97
Cfap54-201ENSMUST00000020200 Gm2431E9Q8S1 172 aa2.75□□□□□ -1.97
Cfap54-201ENSMUST00000020200 Gm10024A0A0A0MQA4 119 aa2.74□□□□□ -1.97
Cfap54-201ENSMUST00000020200 Gpr98Q8VHN7 6298 aaKnown RBP2.73□□□□□ -1.97
Cfap54-201ENSMUST00000020200 Gm45618A0A1B0GSA0 219 aa2.69□□□□□ -1.98
Cfap54-201ENSMUST00000020200 Gm40460A0A1B0GR10 244 aa2.67□□□□□ -1.98
Cfap54-201ENSMUST00000020200 Gm7579A0A1B0GRJ4 243 aa2.67□□□□□ -1.98
Cfap54-201ENSMUST00000020200 Krtap5-5Q2TA51 241 aa2.67□□□□□ -1.98
Cfap54-201ENSMUST00000020200 Krtap5-4Q62220 223 aa2.67□□□□□ -1.98
Cfap54-201ENSMUST00000020200 Gm11567Q9D141 195 aa2.6□□□□□ -1.99
Cfap54-201ENSMUST00000020200 Gm39115A0A1B0GSH7 232 aa2.58□□□□□ -2
Cfap54-201ENSMUST00000020200 Muc19Q6PZE0 7524 aa2.56□□□□□ -2
Cfap54-201ENSMUST00000020200 Gm11639A0A1D5RLM8 5808 aa2.56□□□□□ -2
Cfap54-201ENSMUST00000020200 DstQ91ZU6 7393 aaKnown RBP2.52□□□□□ -2.01
Cfap54-201ENSMUST00000020200 Gm29735A0A1B0GT06 219 aa2.5□□□□□ -2.01
Cfap54-201ENSMUST00000020200 1110025L11RikO09048 78 aa2.41□□□□□ -2.02
Cfap54-201ENSMUST00000020200 Krtap6-5Q925H3 78 aa2.41□□□□□ -2.02
Cfap54-201ENSMUST00000020200 AhnakE9Q616 5656 aaKnown RBP2.33□□□□□ -2.04
Cfap54-201ENSMUST00000020200 NebE9Q1W3 7152 aa2.29□□□□□ -2.04
Cfap54-201ENSMUST00000020200 Gm10229O08631 77 aa2.14□□□□□ -2.07
Cfap54-201ENSMUST00000020200 Sprr2bO70554 98 aa2.11□□□□□ -2.07
Cfap54-201ENSMUST00000020200 Krtap21-1Q925H4 128 aa1.98□□□□□ -2.09
Cfap54-201ENSMUST00000020200 Phgr1Q8K0G7 91 aa1.88□□□□□ -2.11
Cfap54-201ENSMUST00000020200 Krtap6-2O08884 159 aa1.82□□□□□ -2.12
Cfap54-201ENSMUST00000020200 Krtap5-1Q64507 230 aa1.8□□□□□ -2.12
Cfap54-201ENSMUST00000020200 Gm4559A4IF42 199 aa1.77□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 47.2 ms