RNA–Protein interactions for RNA: ENSMUST00000018810.9

Cbx1-201, Transcript of Chromobox protein homolog 1, mousemouse

TSL 1 (best) BASIC

Gene Cbx1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1-201ENSMUST00000018810 A030005K14RikA0A1Y7VNY1 122 aa6.57□□□□□ -1.36
Cbx1-201ENSMUST00000018810 Krtap28-13A0A087WQP5 138 aa6.57□□□□□ -1.36
Cbx1-201ENSMUST00000018810 A0A1Y7VJH8 109 aa6.54□□□□□ -1.36
Cbx1-201ENSMUST00000018810 A0A1Y7VLE6 161 aa6.54□□□□□ -1.36
Cbx1-201ENSMUST00000018810 Lce1eQ9D139 143 aa6.37□□□□□ -1.39
Cbx1-201ENSMUST00000018810 Gm10272F7CZ33 110 aa6.34□□□□□ -1.39
Cbx1-201ENSMUST00000018810 Sprr2gO70558 76 aa6.33□□□□□ -1.4
Cbx1-201ENSMUST00000018810 Krtap28-10A0A1Y7VP58 119 aa6.32□□□□□ -1.4
Cbx1-201ENSMUST00000018810 Krtap20-2E9Q0A8 60 aa6.29□□□□□ -1.4
Cbx1-201ENSMUST00000018810 A030014E15RikA0A1Y7VJV2 120 aa6.14□□□□□ -1.43
Cbx1-201ENSMUST00000018810 Gm11559Q9D3H7 191 aa6.13□□□□□ -1.43
Cbx1-201ENSMUST00000018810 A0A1Y7VJ07 166 aa6.09□□□□□ -1.43
Cbx1-201ENSMUST00000018810 Lce3bQ9CQM7 98 aa6.06□□□□□ -1.44
Cbx1-201ENSMUST00000018810 Lce1dQ9D731 133 aa6.04□□□□□ -1.44
Cbx1-201ENSMUST00000018810 Gm11938Q9D3H4 131 aa6.04□□□□□ -1.44
Cbx1-201ENSMUST00000018810 Syne1Q6ZWR6 8799 aa5.99□□□□□ -1.45
Cbx1-201ENSMUST00000018810 Sprr2dO70555 85 aa5.97□□□□□ -1.45
Cbx1-201ENSMUST00000018810 Sprr2iO70560 76 aa5.88□□□□□ -1.47
Cbx1-201ENSMUST00000018810 Krtap5-2Q9D5Z7 189 aa5.88□□□□□ -1.47
Cbx1-201ENSMUST00000018810 4933428G20RikQ9D3X4 101 aa5.87□□□□□ -1.47
Cbx1-201ENSMUST00000018810 Eppk1Q8R0W0 6548 aa5.86□□□□□ -1.47
Cbx1-201ENSMUST00000018810 Lce1kJ3QP15 125 aa5.83□□□□□ -1.48
Cbx1-201ENSMUST00000018810 Gm9112A2AI92 75 aa5.83□□□□□ -1.48
Cbx1-201ENSMUST00000018810 Gm7544A0A1Y7VJ58 118 aa5.81□□□□□ -1.48
Cbx1-201ENSMUST00000018810 Krtap19-4Q925H7 84 aa5.74□□□□□ -1.49
Cbx1-201ENSMUST00000018810 Gm11554B1AQB2 190 aa5.71□□□□□ -1.49
Cbx1-201ENSMUST00000018810 A030005L19RikA0A1Y7VIU2 113 aa5.71□□□□□ -1.5
Cbx1-201ENSMUST00000018810 Macf1Q9QXZ0 7354 aaKnown RBP5.67□□□□□ -1.5
Cbx1-201ENSMUST00000018810 Gm11568A2A4M2 211 aa5.67□□□□□ -1.5
Cbx1-201ENSMUST00000018810 Lce1fB9EJP6 147 aa5.67□□□□□ -1.5
Cbx1-201ENSMUST00000018810 Krtap9-1Q64526 186 aa5.67□□□□□ -1.5
Cbx1-201ENSMUST00000018810 Lce1cQ9D1C5 147 aa5.67□□□□□ -1.5
Cbx1-201ENSMUST00000018810 Gm4553A0A1B0GSA9 284 aa5.62□□□□□ -1.51
Cbx1-201ENSMUST00000018810 Lce3cQ91V05 98 aa5.62□□□□□ -1.51
Cbx1-201ENSMUST00000018810 Mt1P02802 61 aaKnown RBP5.6□□□□□ -1.51
Cbx1-201ENSMUST00000018810 Kmt2dQ6PDK2 5588 aa5.59□□□□□ -1.51
Cbx1-201ENSMUST00000018810 Lce3dE9Q8V1 98 aa5.55□□□□□ -1.52
Cbx1-201ENSMUST00000018810 Gm11639A0A1D5RLM8 5808 aa5.54□□□□□ -1.52
Cbx1-201ENSMUST00000018810 Gm10100J3QK64 120 aa5.53□□□□□ -1.52
Cbx1-201ENSMUST00000018810 Lce3eF8VQJ0 98 aa5.49□□□□□ -1.53
Cbx1-201ENSMUST00000018810 Lce3fQ6PAI4 98 aa5.49□□□□□ -1.53
Cbx1-201ENSMUST00000018810 Gm2431E9Q8S1 172 aa5.46□□□□□ -1.53
Cbx1-201ENSMUST00000018810 Muc19Q6PZE0 7524 aa5.37□□□□□ -1.55
Cbx1-201ENSMUST00000018810 Gm45337A0A1B0GS71 263 aa5.37□□□□□ -1.55
Cbx1-201ENSMUST00000018810 ObscnA2AAJ9 8891 aaKnown RBP5.36□□□□□ -1.55
Cbx1-201ENSMUST00000018810 Gm10142J3KMP7 120 aa5.35□□□□□ -1.55
Cbx1-201ENSMUST00000018810 Gm10153A0A1B0GRL1 320 aa5.34□□□□□ -1.55
Cbx1-201ENSMUST00000018810 Lce3aQ497I5 98 aa5.26□□□□□ -1.57
Cbx1-201ENSMUST00000018810 Hmcn1D3YXG0 5634 aa5.25□□□□□ -1.57
Cbx1-201ENSMUST00000018810 Gpr98Q8VHN7 6298 aaKnown RBP5.24□□□□□ -1.57
Cbx1-201ENSMUST00000018810 Sprr2hO70559 108 aa5.18□□□□□ -1.58
Cbx1-201ENSMUST00000018810 Gm40460A0A1B0GR10 244 aa5.17□□□□□ -1.58
Cbx1-201ENSMUST00000018810 Gm7579A0A1B0GRJ4 243 aa5.17□□□□□ -1.58
Cbx1-201ENSMUST00000018810 Krtap5-5Q2TA51 241 aa5.17□□□□□ -1.58
Cbx1-201ENSMUST00000018810 Krtap5-4Q62220 223 aa5.17□□□□□ -1.58
Cbx1-201ENSMUST00000018810 Gm39115A0A1B0GSH7 232 aa5.11□□□□□ -1.59
Cbx1-201ENSMUST00000018810 DstQ91ZU6 7393 aaKnown RBP5.09□□□□□ -1.6
Cbx1-201ENSMUST00000018810 Mt3P28184 68 aa5.07□□□□□ -1.6
Cbx1-201ENSMUST00000018810 A0A286YCP9 139 aa5.06□□□□□ -1.6
Cbx1-201ENSMUST00000018810 Sprr2eO70556 76 aa4.97□□□□□ -1.61
Cbx1-201ENSMUST00000018810 NebE9Q1W3 7152 aa4.94□□□□□ -1.62
Cbx1-201ENSMUST00000018810 Krtap4-16Q91W93 202 aa4.88□□□□□ -1.63
Cbx1-201ENSMUST00000018810 Sprr2fO70557 76 aa4.8□□□□□ -1.64
Cbx1-201ENSMUST00000018810 Gm45618A0A1B0GSA0 219 aa4.78□□□□□ -1.64
Cbx1-201ENSMUST00000018810 AhnakE9Q616 5656 aaKnown RBP4.72□□□□□ -1.65
Cbx1-201ENSMUST00000018810 Gm10024A0A0A0MQA4 119 aa4.51□□□□□ -1.69
Cbx1-201ENSMUST00000018810 A030003K21RikA0A1Y7VIM3 128 aa4.44□□□□□ -1.7
Cbx1-201ENSMUST00000018810 Gm6217A0A1Y7VJK9 128 aa4.32□□□□□ -1.72
Cbx1-201ENSMUST00000018810 Gm11567Q9D141 195 aa4.3□□□□□ -1.72
Cbx1-201ENSMUST00000018810 1110025L11RikO09048 78 aa4.16□□□□□ -1.74
Cbx1-201ENSMUST00000018810 Krtap6-5Q925H3 78 aa4.16□□□□□ -1.74
Cbx1-201ENSMUST00000018810 Gm29735A0A1B0GT06 219 aa3.97□□□□□ -1.77
Cbx1-201ENSMUST00000018810 Muc16A0A140LJ72 8478 aa3.92□□□□□ -1.78
Cbx1-201ENSMUST00000018810 Gm10229O08631 77 aa3.7□□□□□ -1.82
Cbx1-201ENSMUST00000018810 Sprr2bO70554 98 aa3.67□□□□□ -1.82
Cbx1-201ENSMUST00000018810 Krtap21-1Q925H4 128 aa3.39□□□□□ -1.87
Cbx1-201ENSMUST00000018810 Krtap6-2O08884 159 aa3.21□□□□□ -1.9
Cbx1-201ENSMUST00000018810 Phgr1Q8K0G7 91 aa3.07□□□□□ -1.92
Cbx1-201ENSMUST00000018810 Gm4559A4IF42 199 aa3□□□□□ -1.93
Cbx1-201ENSMUST00000018810 Krtap5-1Q64507 230 aa2.98□□□□□ -1.93
Retrieved 80 of 22,080 RNA–protein pairs in 13.4 ms