RNA–Protein interactions for RNA: ENSMUST00000018737.12

Sparc-201, Transcript of SPARC, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sparc, Length 2,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sparc-201ENSMUST00000018737 Gm6358A0A087WPH4 74 aa4.46□□□□□ -1.69
Sparc-201ENSMUST00000018737 Mt2P02798 61 aa4.46□□□□□ -1.7
Sparc-201ENSMUST00000018737 Muc5bE9Q5I3 4800 aa4.42□□□□□ -1.7
Sparc-201ENSMUST00000018737 Krtap4-13Q9D7P3 165 aa4.35□□□□□ -1.71
Sparc-201ENSMUST00000018737 Lce1cQ9D1C5 147 aa4.31□□□□□ -1.72
Sparc-201ENSMUST00000018737 Gm45337A0A1B0GS71 263 aa4.22□□□□□ -1.73
Sparc-201ENSMUST00000018737 Gm11595B1AQA7 289 aa4.19□□□□□ -1.74
Sparc-201ENSMUST00000018737 Lce1bQ9D149 137 aa4.19□□□□□ -1.74
Sparc-201ENSMUST00000018737 Krtap22-2J3QNX6 67 aa4.18□□□□□ -1.74
Sparc-201ENSMUST00000018737 Sprr2gO70558 76 aa4.18□□□□□ -1.74
Sparc-201ENSMUST00000018737 Lce1fB9EJP6 147 aa4.18□□□□□ -1.74
Sparc-201ENSMUST00000018737 Krtap31-1Q9D644 177 aa4.17□□□□□ -1.74
Sparc-201ENSMUST00000018737 Gm10272F7CZ33 110 aa4.11□□□□□ -1.75
Sparc-201ENSMUST00000018737 Sprr2dO70555 85 aa4.11□□□□□ -1.75
Sparc-201ENSMUST00000018737 Lce1eQ9D139 143 aa4.11□□□□□ -1.75
Sparc-201ENSMUST00000018737 Gm11938Q9D3H4 131 aa4.09□□□□□ -1.76
Sparc-201ENSMUST00000018737 4933428G20RikQ9D3X4 101 aa4.08□□□□□ -1.76
Sparc-201ENSMUST00000018737 Krtap5-4Q62220 223 aa4.05□□□□□ -1.76
Sparc-201ENSMUST00000018737 Gm11562A0PK51 136 aa4□□□□□ -1.77
Sparc-201ENSMUST00000018737 Gm10153A0A1B0GRL1 320 aa3.98□□□□□ -1.77
Sparc-201ENSMUST00000018737 Mdn1A2ANY6 5589 aaKnown RBP3.93□□□□□ -1.78
Sparc-201ENSMUST00000018737 Lce1kJ3QP15 125 aa3.88□□□□□ -1.79
Sparc-201ENSMUST00000018737 Gm11559Q9D3H7 191 aa3.86□□□□□ -1.79
Sparc-201ENSMUST00000018737 Krtap19-4Q925H7 84 aa3.85□□□□□ -1.79
Sparc-201ENSMUST00000018737 Krtap5-1Q64507 230 aa3.84□□□□□ -1.79
Sparc-201ENSMUST00000018737 Lce3bQ9CQM7 98 aa3.79□□□□□ -1.8
Sparc-201ENSMUST00000018737 Gm10100J3QK64 120 aa3.78□□□□□ -1.8
Sparc-201ENSMUST00000018737 Krtap4-6Q3V4B7 195 aa3.76□□□□□ -1.81
Sparc-201ENSMUST00000018737 Syne1Q6ZWR6 8799 aa3.75□□□□□ -1.81
Sparc-201ENSMUST00000018737 Gm4559A4IF42 199 aa3.72□□□□□ -1.81
Sparc-201ENSMUST00000018737 Gm10142J3KMP7 120 aa3.71□□□□□ -1.82
Sparc-201ENSMUST00000018737 Gm4553A0A1B0GSA9 284 aa3.7□□□□□ -1.82
Sparc-201ENSMUST00000018737 Lce3cQ91V05 98 aa3.61□□□□□ -1.83
Sparc-201ENSMUST00000018737 Sprr2hO70559 108 aa3.6□□□□□ -1.83
Sparc-201ENSMUST00000018737 Lce3dE9Q8V1 98 aa3.58□□□□□ -1.84
Sparc-201ENSMUST00000018737 Lce3eF8VQJ0 98 aa3.57□□□□□ -1.84
Sparc-201ENSMUST00000018737 Sprr2iO70560 76 aa3.57□□□□□ -1.84
Sparc-201ENSMUST00000018737 Lce3fQ6PAI4 98 aa3.57□□□□□ -1.84
Sparc-201ENSMUST00000018737 Gm11596B1AQB0 205 aa3.55□□□□□ -1.84
Sparc-201ENSMUST00000018737 Gm11564A2A4L9 201 aa3.54□□□□□ -1.84
Sparc-201ENSMUST00000018737 Krtap4-8B1AQA8 209 aa3.54□□□□□ -1.84
Sparc-201ENSMUST00000018737 Mt4P47945 62 aa3.54□□□□□ -1.84
Sparc-201ENSMUST00000018737 ObscnA2AAJ9 8891 aaKnown RBP3.51□□□□□ -1.85
Sparc-201ENSMUST00000018737 Sprr2eO70556 76 aa3.5□□□□□ -1.85
Sparc-201ENSMUST00000018737 Gpr98Q8VHN7 6298 aaKnown RBP3.47□□□□□ -1.85
Sparc-201ENSMUST00000018737 2300003K06RikA2A4M0 262 aa3.47□□□□□ -1.85
Sparc-201ENSMUST00000018737 Hmcn1D3YXG0 5634 aa3.47□□□□□ -1.85
Sparc-201ENSMUST00000018737 Sprr2kO70562 68 aa3.44□□□□□ -1.86
Sparc-201ENSMUST00000018737 Lce3aQ497I5 98 aa3.44□□□□□ -1.86
Sparc-201ENSMUST00000018737 Syne2Q6ZWQ0 6874 aaKnown RBP3.41□□□□□ -1.86
Sparc-201ENSMUST00000018737 Sprr2fO70557 76 aa3.39□□□□□ -1.87
Sparc-201ENSMUST00000018737 Mt1P02802 61 aaKnown RBP3.39□□□□□ -1.87
Sparc-201ENSMUST00000018737 Fsip2A2ARZ3 6995 aa3.39□□□□□ -1.87
Sparc-201ENSMUST00000018737 Krtap5-5Q2TA51 241 aa3.38□□□□□ -1.87
Sparc-201ENSMUST00000018737 Gm11568A2A4M2 211 aa3.3□□□□□ -1.88
Sparc-201ENSMUST00000018737 Krtap9-1Q64526 186 aa3.3□□□□□ -1.88
Sparc-201ENSMUST00000018737 Krtap5-2Q9D5Z7 189 aa3.28□□□□□ -1.88
Sparc-201ENSMUST00000018737 Eppk1Q8R0W0 6548 aa3.2□□□□□ -1.9
Sparc-201ENSMUST00000018737 Krtap20-2E9Q0A8 60 aa3.14□□□□□ -1.91
Sparc-201ENSMUST00000018737 Krtap4-16Q91W93 202 aa3.14□□□□□ -1.91
Sparc-201ENSMUST00000018737 Gm40460A0A1B0GR10 244 aa3.09□□□□□ -1.92
Sparc-201ENSMUST00000018737 Gm7579A0A1B0GRJ4 243 aa3.03□□□□□ -1.92
Sparc-201ENSMUST00000018737 Gm10024A0A0A0MQA4 119 aa3.03□□□□□ -1.92
Sparc-201ENSMUST00000018737 Krtap6-3A0A087WQL6 57 aa3.01□□□□□ -1.93
Sparc-201ENSMUST00000018737 Mt3P28184 68 aa2.98□□□□□ -1.93
Sparc-201ENSMUST00000018737 Macf1Q9QXZ0 7354 aaKnown RBP2.83□□□□□ -1.96
Sparc-201ENSMUST00000018737 Muc16A0A140LJ72 8478 aa2.73□□□□□ -1.97
Sparc-201ENSMUST00000018737 Kmt2dQ6PDK2 5588 aa2.67□□□□□ -1.98
Sparc-201ENSMUST00000018737 1110025L11RikO09048 78 aa2.62□□□□□ -1.99
Sparc-201ENSMUST00000018737 Krtap6-5Q925H3 78 aa2.62□□□□□ -1.99
Sparc-201ENSMUST00000018737 Gm11639A0A1D5RLM8 5808 aa2.47□□□□□ -2.01
Sparc-201ENSMUST00000018737 Muc19Q6PZE0 7524 aa2.46□□□□□ -2.02
Sparc-201ENSMUST00000018737 Sprr2bO70554 98 aa2.42□□□□□ -2.02
Sparc-201ENSMUST00000018737 DstQ91ZU6 7393 aaKnown RBP2.37□□□□□ -2.03
Sparc-201ENSMUST00000018737 Gm10229O08631 77 aa2.3□□□□□ -2.04
Sparc-201ENSMUST00000018737 AhnakE9Q616 5656 aaKnown RBP2.29□□□□□ -2.04
Sparc-201ENSMUST00000018737 Krtap21-1Q925H4 128 aa2.16□□□□□ -2.06
Sparc-201ENSMUST00000018737 Phgr1Q8K0G7 91 aa2.12□□□□□ -2.07
Sparc-201ENSMUST00000018737 NebE9Q1W3 7152 aa2.12□□□□□ -2.07
Sparc-201ENSMUST00000018737 Krtap6-2O08884 159 aa1.93□□□□□ -2.1
Retrieved 80 of 22,080 RNA–protein pairs in 14.3 ms