RNA–Protein interactions for RNA: ENSMUST00000012580.12

Hps3-201, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hps3, Length 4,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-201ENSMUST00000012580 Lce1eQ9D139 143 aa4.17□□□□□ -1.74
Hps3-201ENSMUST00000012580 Macf1Q9QXZ0 7354 aaKnown RBP4.15□□□□□ -1.75
Hps3-201ENSMUST00000012580 Gm10142J3KMP7 120 aa4.13□□□□□ -1.75
Hps3-201ENSMUST00000012580 Gm11938Q9D3H4 131 aa4.12□□□□□ -1.75
Hps3-201ENSMUST00000012580 Gm38119A0A0A6YX29 146 aa4.11□□□□□ -1.75
Hps3-201ENSMUST00000012580 Lce1cQ9D1C5 147 aa4.1□□□□□ -1.75
Hps3-201ENSMUST00000012580 Lce3cQ91V05 98 aa4.09□□□□□ -1.75
Hps3-201ENSMUST00000012580 Lce3eF8VQJ0 98 aa4.04□□□□□ -1.76
Hps3-201ENSMUST00000012580 Krtap4-6Q3V4B7 195 aa4.04□□□□□ -1.76
Hps3-201ENSMUST00000012580 Lce3fQ6PAI4 98 aa4.04□□□□□ -1.76
Hps3-201ENSMUST00000012580 Lce3dE9Q8V1 98 aa4.02□□□□□ -1.77
Hps3-201ENSMUST00000012580 Syne2Q6ZWQ0 6874 aaKnown RBP3.98□□□□□ -1.77
Hps3-201ENSMUST00000012580 Sprr2dO70555 85 aa3.98□□□□□ -1.77
Hps3-201ENSMUST00000012580 A030003K21RikA0A1Y7VIM3 128 aa3.97□□□□□ -1.77
Hps3-201ENSMUST00000012580 Lce1fB9EJP6 147 aa3.93□□□□□ -1.78
Hps3-201ENSMUST00000012580 Lce1a1Q9CQH5 143 aa3.93□□□□□ -1.78
Hps3-201ENSMUST00000012580 Mt4P47945 62 aa3.92□□□□□ -1.78
Hps3-201ENSMUST00000012580 Krtap19-4Q925H7 84 aa3.88□□□□□ -1.79
Hps3-201ENSMUST00000012580 Gm11562A0PK51 136 aa3.86□□□□□ -1.79
Hps3-201ENSMUST00000012580 Lce3aQ497I5 98 aa3.86□□□□□ -1.79
Hps3-201ENSMUST00000012580 Lce1gQ9D195 139 aa3.84□□□□□ -1.79
Hps3-201ENSMUST00000012580 Lce1bQ9D149 137 aa3.81□□□□□ -1.8
Hps3-201ENSMUST00000012580 ObscnA2AAJ9 8891 aaKnown RBP3.8□□□□□ -1.8
Hps3-201ENSMUST00000012580 Sprr2iO70560 76 aa3.79□□□□□ -1.8
Hps3-201ENSMUST00000012580 Krtap31-2Q8CAY5 177 aa3.79□□□□□ -1.8
Hps3-201ENSMUST00000012580 Lce1lQ9D1G7 135 aa3.78□□□□□ -1.8
Hps3-201ENSMUST00000012580 Gm6217A0A1Y7VJK9 128 aa3.76□□□□□ -1.81
Hps3-201ENSMUST00000012580 Krtap4-9B1AQA9 244 aa3.74□□□□□ -1.81
Hps3-201ENSMUST00000012580 Krtap4-16Q91W93 202 aa3.73□□□□□ -1.81
Hps3-201ENSMUST00000012580 Sprr2fO70557 76 aa3.73□□□□□ -1.81
Hps3-201ENSMUST00000012580 Gm11564A2A4L9 201 aa3.73□□□□□ -1.81
Hps3-201ENSMUST00000012580 Gm11595B1AQA7 289 aa3.73□□□□□ -1.81
Hps3-201ENSMUST00000012580 Krtap4-8B1AQA8 209 aa3.73□□□□□ -1.81
Hps3-201ENSMUST00000012580 Gm11596B1AQB0 205 aa3.68□□□□□ -1.82
Hps3-201ENSMUST00000012580 2300003K06RikA2A4M0 262 aa3.66□□□□□ -1.82
Hps3-201ENSMUST00000012580 Krtap4-13Q9D7P3 165 aa3.66□□□□□ -1.82
Hps3-201ENSMUST00000012580 Muc19Q6PZE0 7524 aa3.64□□□□□ -1.83
Hps3-201ENSMUST00000012580 Sprr2hO70559 108 aa3.62□□□□□ -1.83
Hps3-201ENSMUST00000012580 Lce1kJ3QP15 125 aa3.61□□□□□ -1.83
Hps3-201ENSMUST00000012580 DstQ91ZU6 7393 aaKnown RBP3.59□□□□□ -1.83
Hps3-201ENSMUST00000012580 A0A286YCP9 139 aa3.49□□□□□ -1.85
Hps3-201ENSMUST00000012580 Sprr2eO70556 76 aa3.49□□□□□ -1.85
Hps3-201ENSMUST00000012580 Gm10024A0A0A0MQA4 119 aa3.48□□□□□ -1.85
Hps3-201ENSMUST00000012580 NebE9Q1W3 7152 aa3.47□□□□□ -1.85
Hps3-201ENSMUST00000012580 Mt1P02802 61 aaKnown RBP3.36□□□□□ -1.87
Hps3-201ENSMUST00000012580 Krtap20-2E9Q0A8 60 aa3.31□□□□□ -1.88
Hps3-201ENSMUST00000012580 Gm11554B1AQB2 190 aa3.15□□□□□ -1.9
Hps3-201ENSMUST00000012580 Mt3P28184 68 aa3.1□□□□□ -1.91
Hps3-201ENSMUST00000012580 Gm11568A2A4M2 211 aa3.08□□□□□ -1.92
Hps3-201ENSMUST00000012580 Krtap9-1Q64526 186 aa3.08□□□□□ -1.92
Hps3-201ENSMUST00000012580 Kmt2dQ6PDK2 5588 aa3.02□□□□□ -1.93
Hps3-201ENSMUST00000012580 Krtap6-3A0A087WQL6 57 aa2.99□□□□□ -1.93
Hps3-201ENSMUST00000012580 Hmcn1D3YXG0 5634 aa2.94□□□□□ -1.94
Hps3-201ENSMUST00000012580 Gm11639A0A1D5RLM8 5808 aa2.74□□□□□ -1.97
Hps3-201ENSMUST00000012580 Krtap5-2Q9D5Z7 189 aa2.74□□□□□ -1.97
Hps3-201ENSMUST00000012580 Gm45618A0A1B0GSA0 219 aa2.73□□□□□ -1.97
Hps3-201ENSMUST00000012580 Gm2431E9Q8S1 172 aa2.71□□□□□ -1.98
Hps3-201ENSMUST00000012580 Gm11559Q9D3H7 191 aa2.71□□□□□ -1.98
Hps3-201ENSMUST00000012580 Gpr98Q8VHN7 6298 aaKnown RBP2.67□□□□□ -1.98
Hps3-201ENSMUST00000012580 1110025L11RikO09048 78 aa2.64□□□□□ -1.99
Hps3-201ENSMUST00000012580 Krtap6-5Q925H3 78 aa2.64□□□□□ -1.99
Hps3-201ENSMUST00000012580 Gm10153A0A1B0GRL1 320 aa2.63□□□□□ -1.99
Hps3-201ENSMUST00000012580 Eppk1Q8R0W0 6548 aa2.61□□□□□ -1.99
Hps3-201ENSMUST00000012580 Gm39115A0A1B0GSH7 232 aa2.6□□□□□ -1.99
Hps3-201ENSMUST00000012580 Gm29735A0A1B0GT06 219 aa2.55□□□□□ -2
Hps3-201ENSMUST00000012580 Sprr2bO70554 98 aa2.52□□□□□ -2.01
Hps3-201ENSMUST00000012580 Gm4553A0A1B0GSA9 284 aa2.48□□□□□ -2.01
Hps3-201ENSMUST00000012580 Gm10229O08631 77 aa2.38□□□□□ -2.03
Hps3-201ENSMUST00000012580 Gm45337A0A1B0GS71 263 aa2.37□□□□□ -2.03
Hps3-201ENSMUST00000012580 Gm40460A0A1B0GR10 244 aa2.31□□□□□ -2.04
Hps3-201ENSMUST00000012580 Gm7579A0A1B0GRJ4 243 aa2.31□□□□□ -2.04
Hps3-201ENSMUST00000012580 Krtap5-5Q2TA51 241 aa2.31□□□□□ -2.04
Hps3-201ENSMUST00000012580 Krtap5-4Q62220 223 aa2.31□□□□□ -2.04
Hps3-201ENSMUST00000012580 AhnakE9Q616 5656 aaKnown RBP2.31□□□□□ -2.04
Hps3-201ENSMUST00000012580 Phgr1Q8K0G7 91 aa2.29□□□□□ -2.04
Hps3-201ENSMUST00000012580 Gm11567Q9D141 195 aa2.29□□□□□ -2.04
Hps3-201ENSMUST00000012580 Krtap21-1Q925H4 128 aa2.08□□□□□ -2.08
Hps3-201ENSMUST00000012580 Krtap6-2O08884 159 aa1.98□□□□□ -2.09
Hps3-201ENSMUST00000012580 Krtap5-1Q64507 230 aa1.84□□□□□ -2.12
Hps3-201ENSMUST00000012580 Gm4559A4IF42 199 aa1.76□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 100.6 ms